FFCP PHASE1:Hg19::chr19:3366625..3366629,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4782 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7786 | |||
|TSSclassifier=strong | |||
|UniProt=P08651 | |||
|association_with_transcript=-5bp_to_ENST00000269778_5end | |||
|description=CAGE_peak_4_at_NFIC_5end | |||
|id=chr19:3366625..3366629,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.51e-29!180;CL:0000057!2.58e-20!75;CL:0000183!5.96e-13!59;CL:0000220!1.37e-12!246;CL:0000222!1.38e-12!119;CL:0002321!5.37e-12!248;CL:0000187!2.37e-11!54;CL:0000680!5.84e-11!57;CL:0000056!5.84e-11!57;CL:0000355!5.84e-11!57;CL:0002620!9.92e-10!23;CL:0000192!6.24e-09!42;CL:0000514!6.24e-09!42;CL:0000548!8.03e-09!679;CL:0000004!8.03e-09!679;CL:0000255!8.03e-09!679;CL:0000393!1.07e-08!60;CL:0000211!1.07e-08!60;CL:0002371!1.90e-08!591;CL:0000012!3.42e-08!682;CL:0000144!1.20e-07!625;CL:0000359!8.25e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002620;8.28e-11;23!CL:0000057;2.47e-09;73!CL:0000359;3.49e-07;32!CL:0000192;6.80e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.53e-24,76;CL:0002620,6.64e-11,23;CL:0000187,2.46e-10,55;CL:0000680,8.29e-10,58;CL:0000056,8.29e-10,58;CL:0000355,8.29e-10,58;CL:0000222,2.77e-09,121;CL:0000192,2.24e-08,43;CL:0000514,2.24e-08,43;CL:0000393,3.29e-08,61;CL:0000211,3.29e-08,61;CL:0000359,6.70e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;6.80e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.57e-18!365;UBERON:0005256!7.93e-16!143;UBERON:0000914!2.01e-15!83;UBERON:0002329!2.01e-15!83;UBERON:0003077!2.01e-15!83;UBERON:0003059!2.01e-15!83;UBERON:0007282!2.01e-15!83;UBERON:0009618!2.01e-15!83;UBERON:0007285!2.01e-15!83;UBERON:0003102!3.13e-14!95;UBERON:0000486!4.40e-14!82;UBERON:0002100!1.03e-13!216;UBERON:0003104!6.10e-13!238;UBERON:0009142!6.10e-13!238;UBERON:0004290!1.41e-12!70;UBERON:0000481!2.40e-11!347;UBERON:0000119!4.26e-11!312;UBERON:0000468!1.34e-10!659;UBERON:0001134!1.44e-10!61;UBERON:0002036!1.44e-10!61;UBERON:0003082!1.44e-10!61;UBERON:0000483!1.46e-10!309;UBERON:0003914!1.91e-10!118;UBERON:0000467!2.44e-10!625;UBERON:0002385!2.60e-10!63;UBERON:0001015!2.60e-10!63;UBERON:0000383!2.60e-10!63;UBERON:0000480!2.86e-10!626;UBERON:0000477!3.56e-09!286;UBERON:0001637!3.02e-08!42;UBERON:0003509!3.02e-08!42;UBERON:0004572!3.02e-08!42;UBERON:0002199!6.32e-08!45;UBERON:0002416!6.32e-08!45;UBERON:0002049!9.70e-08!79;UBERON:0007798!9.70e-08!79;UBERON:0002097!1.95e-07!40;UBERON:0000490!2.36e-07!138;UBERON:0000923!3.02e-07!604;UBERON:0005291!3.02e-07!604;UBERON:0006598!3.02e-07!604;UBERON:0002532!3.02e-07!604;UBERON:0003103!3.03e-07!69;UBERON:0002050!4.58e-07!605;UBERON:0005423!4.58e-07!605;UBERON:0004111!4.75e-07!241;UBERON:0001981!4.77e-07!60;UBERON:0007500!4.77e-07!60;UBERON:0004537!4.77e-07!60;UBERON:0006965!4.77e-07!60;UBERON:0000926!4.82e-07!448;UBERON:0004120!4.82e-07!448;UBERON:0006603!4.82e-07!448;UBERON:0000055!7.46e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0003102;3.11e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,6.38e-14,78;UBERON:0000486,1.57e-13,83;UBERON:0003102,1.72e-12,99;UBERON:0002329,4.64e-12,71;UBERON:0003059,4.64e-12,71;UBERON:0007282,4.64e-12,71;UBERON:0004290,4.64e-12,71;UBERON:0009618,4.64e-12,71;UBERON:0007524,7.11e-12,73;UBERON:0003077,1.10e-11,72;UBERON:0007285,1.10e-11,72;UBERON:0001134,4.83e-10,62;UBERON:0002036,4.83e-10,62;UBERON:0003082,4.83e-10,62;UBERON:0002385,2.40e-09,64;UBERON:0001015,2.40e-09,64;UBERON:0000383,2.40e-09,64;UBERON:0002199,5.67e-09,46;UBERON:0002416,5.67e-09,46;UBERON:0003104,5.71e-09,160;UBERON:0009142,5.71e-09,160;UBERON:0005256,9.08e-09,122;UBERON:0002100,9.82e-09,199;UBERON:0002097,5.70e-08,41;UBERON:0001637,7.07e-08,42;UBERON:0003509,7.07e-08,42;UBERON:0004572,7.07e-08,42 | |||
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| |||
|short_description=p4@NFIC | |||
}} |
Revision as of 20:30, 20 January 2014
Short description: | p4@NFIC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NFIC_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000269778_5end |
EntrezGene: | NFIC |
HGNC: | 7786 |
UniProt: | P08651 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.53e-24 | 76 |
skin fibroblast | 6.64e-11 | 23 |
muscle cell | 2.46e-10 | 55 |
muscle precursor cell | 8.29e-10 | 58 |
myoblast | 8.29e-10 | 58 |
multi-potent skeletal muscle stem cell | 8.29e-10 | 58 |
mesodermal cell | 2.77e-09 | 121 |
smooth muscle cell | 2.24e-08 | 43 |
smooth muscle myoblast | 2.24e-08 | 43 |
electrically responsive cell | 3.29e-08 | 61 |
electrically active cell | 3.29e-08 | 61 |
vascular associated smooth muscle cell | 6.70e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 6.38e-14 | 78 |
multilaminar epithelium | 1.57e-13 | 83 |
surface structure | 1.72e-12 | 99 |
somite | 4.64e-12 | 71 |
presomitic mesoderm | 4.64e-12 | 71 |
presumptive segmental plate | 4.64e-12 | 71 |
dermomyotome | 4.64e-12 | 71 |
trunk paraxial mesoderm | 4.64e-12 | 71 |
dense mesenchyme tissue | 7.11e-12 | 73 |
paraxial mesoderm | 1.10e-11 | 72 |
presumptive paraxial mesoderm | 1.10e-11 | 72 |
skeletal muscle tissue | 4.83e-10 | 62 |
striated muscle tissue | 4.83e-10 | 62 |
myotome | 4.83e-10 | 62 |
muscle tissue | 2.40e-09 | 64 |
musculature | 2.40e-09 | 64 |
musculature of body | 2.40e-09 | 64 |
integument | 5.67e-09 | 46 |
integumental system | 5.67e-09 | 46 |
mesenchyme | 5.71e-09 | 160 |
entire embryonic mesenchyme | 5.71e-09 | 160 |
trunk mesenchyme | 9.08e-09 | 122 |
trunk | 9.82e-09 | 199 |
skin of body | 5.70e-08 | 41 |
artery | 7.07e-08 | 42 |
arterial blood vessel | 7.07e-08 | 42 |
arterial system | 7.07e-08 | 42 |