FFCP PHASE1:Hg19::chr18:19749824..19749839,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:19749824..19749839,- | |||
|id=chr18:19749824..19749839,- | |||
|ontology_enrichment_celltype=CL:1000306!1.31e-07!4;CL:0002547!1.31e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:1000306;1.72e-18;4!CL:0002547;1.72e-18;4!CL:0000039;2.62e-11;7!CL:0000586;2.62e-11;7!CL:0002568;3.82e-09;1!CL:0000077;5.38e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,2.47e-18,4;CL:0002547,2.47e-18,4;CL:0000039,2.58e-11,7;CL:0000586,2.58e-11,7;CL:0002568,4.15e-09,1;CL:0000077,5.17e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0004140;2.08e-09;1 | |||
|ontology_enrichment_disease=DOID:2394!6.07e-12!14 | |||
|ontology_enrichment_disease_v019=DOID:1799;9.04e-10;1!DOID:10165;9.04e-10;1!DOID:1798;9.04e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,9.44e-10,1;DOID:10165,9.44e-10,1;DOID:1798,9.44e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0004872!4.39e-12!84;UBERON:0007100!1.76e-11!27;UBERON:0003914!2.63e-09!118;UBERON:0001981!4.72e-09!60;UBERON:0007500!4.72e-09!60;UBERON:0004537!4.72e-09!60;UBERON:0006965!4.72e-09!60;UBERON:0001009!9.47e-09!113;UBERON:0000948!1.75e-08!24;UBERON:0005498!1.75e-08!24;UBERON:0004140!1.75e-08!24;UBERON:0009881!1.75e-08!24;UBERON:0004141!1.75e-08!24;UBERON:0003084!1.75e-08!24;UBERON:0007005!1.75e-08!24;UBERON:0004139!1.75e-08!24;UBERON:0004291!1.75e-08!24;UBERON:0002118!3.22e-08!5;UBERON:0004532!3.22e-08!5;UBERON:0002323!8.18e-08!46;UBERON:0000415!1.31e-07!4;UBERON:0007240!1.31e-07!4;UBERON:0005742!1.31e-07!4;UBERON:0005734!1.31e-07!4;UBERON:0004664!1.31e-07!4;UBERON:0004663!1.31e-07!4;UBERON:0004535!3.73e-07!110;UBERON:0001637!4.65e-07!42;UBERON:0003509!4.65e-07!42;UBERON:0004572!4.65e-07!42;UBERON:0000055!4.81e-07!69;UBERON:0004458!4.94e-07!49 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.72e-18;4!UBERON:0000415;1.72e-18;4!UBERON:0007240;1.72e-18;4!UBERON:0005742;1.72e-18;4!UBERON:0005734;1.72e-18;4!UBERON:0004664;1.72e-18;4!UBERON:0004663;1.72e-18;4!UBERON:0002108;2.31e-15;4!UBERON:0002134;3.82e-09;1!UBERON:0005208;3.82e-09;1!UBERON:0004145;3.82e-09;1!UBERON:0005946;3.82e-09;1!UBERON:0005965;3.82e-09;1!UBERON:0002078;3.82e-09;1!UBERON:0005409;1.20e-08;22!UBERON:0000160;2.19e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,2.47e-18,4;UBERON:0007240,2.47e-18,4;UBERON:0005742,2.47e-18,4;UBERON:0005734,2.47e-18,4;UBERON:0004664,2.47e-18,4;UBERON:0004663,2.47e-18,4;UBERON:0004797,3.13e-18,7;UBERON:0002108,2.37e-15,4;UBERON:0002134,3.25e-09,1;UBERON:0005208,3.25e-09,1;UBERON:0005946,3.25e-09,1;UBERON:0005965,3.25e-09,1;UBERON:0002078,3.25e-09,1;UBERON:0005409,1.17e-07,25;UBERON:0000160,2.06e-07,17 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0.993943903390637,0.379891534993739,5.16395805171553,1.14734648299525,1.06400514659507,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0.348581828608555,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16344544182,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,4.22015127883421,1.74306691720059,6.59821741801577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,1.02511319404561,0,0.321707842287215,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0.0920809889358963,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0.318203247925937,0,0,0,0,0.404364963146632,0,0.842516912477962,0,0.487426979262569,0,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0,0,0.811641507850816,0.6196469961995,0,0.286822704408103,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.341826167541004,9.2225561755224,4.48788222048861,7.71396340646257,0.638002319463839,0.366390373607449,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0.141353071433941,0,0,1.68069372556344,0.611030144933625,0,0.123563938946503,0.104421949505455,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.558564802544508,0.687481272035051,1.43574604915363,0.399358000997982,0.429226048136571,0.446342914883745,2.8217058444425,0.720599767084807,0,0,0,0,0.0984274815147488,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.104909176269996,0,0,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0.318593534327405,0,0.155262956876259,0,0.265841714557995,0.521745061811734,1.6528336989694,1.14241563650639,0.406870733204662,0.181848659202559,0.644463342254931,0.464033759878494,0.796191777397232,0,0,0,0,0,2.14441591374926,0,0,0.231522474323834,0,0,0,0.219284049578707,0,0.38582807654183,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0.781514011233092,7.07148075099841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,5.09349443512435,2.40415516554353,0,0.490296643507811,0,0,0,0,0,0,0.0644578879735772,0,0,0,0.0802413666891683,2.92134555298607,0,0,0,0,0,5.290268405154,0,0,0,0,0,0.633492505057185,0,0.26721740526556,0.18378979906969,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p@chr18:19749824..19749839,- | |||
}} |
Revision as of 18:44, 20 January 2014
Short description: | p@chr18:19749824..19749839, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:19749824..19749839, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 2.47e-18 | 4 |
fibroblast of the aortic adventitia | 2.47e-18 | 4 |
germ line cell | 2.58e-11 | 7 |
germ cell | 2.58e-11 | 7 |
mesenchymal stem cell of Wharton's jelly | 4.15e-09 | 1 |
mesothelial cell | 5.17e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
artery wall | 2.47e-18 | 4 |
tunica adventitia of artery | 2.47e-18 | 4 |
adventitia | 2.47e-18 | 4 |
tunica adventitia of blood vessel | 2.47e-18 | 4 |
aorta tunica adventitia | 2.47e-18 | 4 |
aorta wall | 2.47e-18 | 4 |
blood vessel layer | 3.13e-18 | 7 |
small intestine | 2.37e-15 | 4 |
tricuspid valve | 3.25e-09 | 1 |
right atrium valve | 3.25e-09 | 1 |
outflow tract of atrium | 3.25e-09 | 1 |
outflow part of right atrium | 3.25e-09 | 1 |
right cardiac atrium | 3.25e-09 | 1 |
gastrointestinal system | 1.17e-07 | 25 |
intestine | 2.06e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 9.44e-10 | 1 |
endocrine pancreas cancer | 9.44e-10 | 1 |
pancreatic endocrine carcinoma | 9.44e-10 | 1 |