FFCP PHASE1:Hg19::chr18:18822160..18822178,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80000 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31042 | |||
|TSSclassifier=strong | |||
|UniProt=Q9C091,B4DDS9 | |||
|association_with_transcript=-24bp_to_ENST00000269218,ENST00000400483,ENST00000424526,ENST00000431264,NM_001142966,uc002ktf.1,uc010dlp.1,uc010xam.1_5end | |||
|description=CAGE_peak_3_at_GREB1L_5end | |||
|id=chr18:18822160..18822178,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.46e-20;7!CL:0000586;1.46e-20;7!CL:0002253;5.93e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.37e-20,7;CL:0000586,1.37e-20,7;CL:0002253,6.42e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.47e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3347;1.41e-16;1!DOID:3095;1.51e-11;22!DOID:2994;1.51e-11;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,8.86e-17,1;DOID:3095,1.47e-11,22;DOID:2994,1.47e-11,22 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.53e-10!57;UBERON:0005068!2.53e-10!57;UBERON:0006241!2.53e-10!57;UBERON:0007135!2.53e-10!57;UBERON:0000064!3.11e-10!219;UBERON:0007023!6.65e-09!115;UBERON:0000955!7.69e-09!69;UBERON:0006238!7.69e-09!69;UBERON:0001017!9.77e-09!82;UBERON:0000073!1.40e-08!94;UBERON:0001016!1.40e-08!94;UBERON:0003075!2.66e-08!86;UBERON:0007284!2.66e-08!86;UBERON:0002616!6.31e-08!59;UBERON:0005743!6.65e-08!86;UBERON:0002780!1.44e-07!41;UBERON:0001890!1.44e-07!41;UBERON:0006240!1.44e-07!41;UBERON:0002346!1.61e-07!90;UBERON:0003080!2.94e-07!42;UBERON:0002020!3.49e-07!34;UBERON:0003528!3.49e-07!34;UBERON:0000349!4.24e-07!5;UBERON:0001893!6.43e-07!34;UBERON:0001869!7.58e-07!32;UBERON:0001737!9.20e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;1.41e-16;1!UBERON:0001876;5.93e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001876,4.02e-09,2 | |||
|phase1_expression=0,0,0.704772020479856,0,0,0,0,0,0,0.245733936501509,0,0.655324116390517,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0.547497700291537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.530119073285941,0.116193942869518,0.621966330092223,0.252320850875628,0.36497735907583,0,0,0,0,0,0.473227200159376,0.337169380156203,0,0.55146986366197,0.435758888184812,0,0.404493924480493,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.306923946576125,0,0.128139149255701,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0,0,0.15403067420883,1.56869953835371,0,0,0,0,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,0.245040215981032,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.36408156524854,0,0,0.23874448473769,1.18785872333055,0.307160702099232,1.9882952955326,0.984685914873589,0,0,0.211125408127993,0,0,0.251932747854276,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0.1137934482855,0,0,0.344743373241465,0,0.347249989866585,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0.278847488557207,0.153900517007594,0.113942055847001,3.4584585658209,3.50054813198111,1.3037684630641,0.638002319463839,0.641183153813036,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,1.27217764290547,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0,0.150323419414493,0.311064574191741,0,0,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0.0821154570532092,0,0,0,0,0,0.0633107959558787,0.391102765469606,0.160317640503067,0,0,0,0.114536596165916,0,0,0.372757606696298,0,0.135904206073614,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0.137539436597234,0,0,0,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,1.08803560673895,0.2506898940227,0.306345576763462,0,0,0,0.244052529803926,0,0,0.221858103073705,0.124192805882767,0.968440444553616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0.192619830407303,0.214441591374926,0,0.226705925512272,0,0,0,0.308801447160972,0,0,0.192914038270915,0,0,0.690860683462397,0,0.138258436151731,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0,0,0.127894371303652,1.29389773676018,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0.192687675289379,0,0.319267718114302,0,0,0.345786262321089,0.161475645631851,0,0,0.11796972334774,0,0,0,1.3807198521202,0,0,0,0,0.261906694481422,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0.227662191351298,0.177404740325278,0,0.342976018874837,0,0.328863867814245,0.236387681767936,0,0.078493092850514,0.314231179832004,0.840816489941367,0,0,0,0,0.316027223465453,0,0,0,0,0,0.691259661814092,0,0.118332000730565,0.0852134047591577,0.846774100381858,0.22910686854405,0,0,0,0,0,0.647428837187895,0,0,0,0.233939463462106,0,0,0,0.879524133963433,0,0,0,0,0,0,0,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0.0802413666891683,0,0,0,0.315543124386369,0.0679914901909147,0.436350690340377,0,0,0,0,0.630832124175395,0.327796715891087,0.126698501011437,0,0,0,0,0.530450887527676,1.33982065078089,0.829169439458779,0,0,0,0,0,0.224263725161227,0.0636471582781649,0.202117188958219,0,0,0,0.143444410785353,0.332660356546013,0.162806537221949,0.106727345877715,0,0.449126010532934,0,0.122241444182866,1.22068853494722,0,0,0 | |||
|short_description=p3@GREB1L | |||
}} |
Revision as of 18:42, 20 January 2014
Short description: | p3@GREB1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GREB1L_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_ENST00000269218, ENST00000400483, ENST00000424526, ENST00000431264, NM_001142966, uc002ktf.1, uc010dlp.1, uc010xam.1_5end |
EntrezGene: | GREB1L |
HGNC: | 31042 |
UniProt: | Q9C091B4DDS9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.37e-20 | 7 |
germ cell | 1.37e-20 | 7 |
epithelial cell of large intestine | 6.42e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
amygdala | 4.02e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 8.86e-17 | 1 |
germ cell and embryonal cancer | 1.47e-11 | 22 |
germ cell cancer | 1.47e-11 | 22 |