FFCP PHASE1:Hg19::chr18:666834..666841,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:666834..666841,+ | |||
|id=chr18:666834..666841,+ | |||
|ontology_enrichment_celltype=CL:0000039!3.36e-07!7;CL:0000586!3.36e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;4.32e-08;7!CL:0000586;4.32e-08;7!CL:0000082;1.21e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.30e-08,7;CL:0000586,3.30e-08,7;CL:0000082,1.33e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.31e-07;1 | |||
|ontology_enrichment_disease=DOID:162!3.67e-28!235;DOID:14566!1.95e-27!239;DOID:0050687!3.20e-19!143;DOID:305!5.63e-17!106;DOID:0050686!9.61e-14!137;DOID:2531!3.84e-12!51;DOID:0060083!3.84e-12!51;DOID:1240!3.05e-09!39;DOID:8692!4.89e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1325;4.12e-21;7!DOID:3904;4.12e-21;7!DOID:5409;3.86e-14;4!DOID:3905;7.99e-11;9!DOID:1324;9.52e-10;15!DOID:0050615;4.01e-09;16!DOID:305;5.17e-08;106!DOID:1799;1.02e-07;1!DOID:10165;1.02e-07;1!DOID:1798;1.02e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,5.36e-21,7;DOID:3904,5.36e-21,7;DOID:0050687,1.73e-15,143;DOID:305,2.21e-14,106;DOID:162,2.29e-14,235;DOID:14566,5.94e-14,239;DOID:5409,7.24e-14,4;DOID:3905,9.14e-11,9;DOID:0050686,3.28e-10,137;DOID:1324,1.07e-09,15;DOID:0050615,4.47e-09,16;DOID:1799,9.91e-08,1;DOID:10165,9.91e-08,1;DOID:1798,9.91e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;1.21e-07;19!UBERON:0000115;1.21e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,1.33e-07,19;UBERON:0000115,1.33e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0,0,0,0,0.958120975510189,0.251085279189606,0.61130724598361,0.246301768349837,0.236132343941038,0,0,0,0,0,0,0.232401601740905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.260118695119756,0.328875809207352,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.23486899728753,0,0,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0.375355559615893,0,0,0,0,0,1.25572744982203,0,0,0.300091096084402,0,0.257640540045629,0,0.843881661206331,0,0,0,0,0.355009592516614,0,0.169560592310488,0,0,0,0.487894824518382,0.927708378250397,0.69716365721711,1.0366105501537,1.00928340350251,0.36497735907583,0,0,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0.55146986366197,0,0.474541238222193,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0.122988438543114,0,0,0,1.00528972411631,0,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,0,0,0.148631162288728,0,0.16798212819886,0.141775097242386,0,0.290633938513962,0.383382679165211,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0.0920809889358963,0,0.546273504020151,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0.0852266274161009,0,0,0.192190067365106,1.14851441245126,0.708104465988849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.427296284509893,0,1.47024129588619,0.185803175125719,0.577076851905779,1.63626239701352,0.637705090915289,0.399158742865633,0.191505370132367,0.211673582723883,0.649243880549111,1.12318871245384,0.912938716132769,0.156679895773023,0,0.169291777801603,0.642352300414798,0.605399121573143,0,0.343505344755765,0,0,0.166849141711909,0.586164286206121,0.278406173895242,0,0.270455678475983,0.33307196799782,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0.16480387422676,2.95575571379191,0,0,1.0077309914171,0,0.246169610922139,0,0.0898683511473268,0,0,0,0,0,0,0,0,1.04171104434093,0,0,0.568967241427498,1.5255219017566,1.18193840883968,0.689486746482929,0,1.38899995946634,0,0,0,0,0,0,0,0.139423744278603,0,0,1.1528195219403,1.34636466614658,0.108647371922008,0,0,0,0,0.627921025580099,0,0.451191321234361,0,0,0,0.158936578980379,0.210998064528027,0.163232808159148,0.282706142867882,0,0,0.176915129006678,0,0,0.494255755786011,0.522109747527277,0.202203398942031,0,0.234264445725339,0.364909578431332,0.978323094660449,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0.783532859223623,0,0.171986032471617,0.483781656445426,0.584714536689484,0.410577285266046,0.193978032976839,0,0,0.685209623233754,0.19871461170299,0.0633107959558787,1.95551382734803,0,0,0,1.29681375438695,0.114536596165916,0.686379991447858,0,0,0.707082103850386,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.393915911536118,0.164831716762333,0.404421263125109,0,0.169346664131569,0,0,0.482259445395058,0.687697182986169,0,0,0,0,0.335434687599266,0,0.104909176269996,0,0,0.767660789277781,0,0,0.25426853765475,0,0,0,0,0.410462603746695,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,2.07522952404346,0.37494122388632,0,0,0,0.936669811613763,1.01444720027578,0,0,0,0,0,0,0,0,0,0.295710299979268,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0.231522474323834,0,0.358177682162975,0,0,0.353378291891762,0.38582807654183,0.506827321959218,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0.633936370075881,0,0.320075189082423,0,0,0.552317850755522,0.139879507719444,0,0,0,0.471797825567689,1.41972529649618,0.169732529954025,1.06287460050841,0.247871528518004,0,0,0.788617450012533,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0.322951291263702,0,0.196295437002051,0,0.366857197043358,0.808679663052368,0.381382095467167,0,0.198916222116275,0,0,0,4.97622719514703,0.163771917510097,0,0,0,0,0.19024743058172,0,0,0,0.175871244359621,0.383287282918786,0,0,0,0,0.0887023701626388,0.345701962667338,0,0.0679697329768317,0,0.118193840883968,0.778619813244484,0,0.157115589916002,0,0.913158720509496,0,1.43325506366115,0,2.05417695252545,0.348724276104376,0,0,0,0.17071847709395,0,0,0,0.170426809518315,0,0,0,0,0.671132590786754,0.687051635306701,0.121917924982269,0,0,0,0,1.871515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| |||
|short_description=p@chr18:666834..666841,+ | |||
}} |
Revision as of 18:16, 20 January 2014
Short description: | p@chr18:666834..666841, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:666834..666841, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.30e-08 | 7 |
germ cell | 3.30e-08 | 7 |
epithelial cell of lung | 1.33e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 1.33e-07 | 19 |
lung epithelium | 1.33e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 5.36e-21 | 7 |
bronchogenic carcinoma | 5.36e-21 | 7 |
cell type cancer | 1.73e-15 | 143 |
carcinoma | 2.21e-14 | 106 |
cancer | 2.29e-14 | 235 |
disease of cellular proliferation | 5.94e-14 | 239 |
lung small cell carcinoma | 7.24e-14 | 4 |
lung carcinoma | 9.14e-11 | 9 |
organ system cancer | 3.28e-10 | 137 |
lung cancer | 1.07e-09 | 15 |
respiratory system cancer | 4.47e-09 | 16 |
islet cell tumor | 9.91e-08 | 1 |
endocrine pancreas cancer | 9.91e-08 | 1 |
pancreatic endocrine carcinoma | 9.91e-08 | 1 |