FFCP PHASE1:Hg19::chr17:72745333..72745351,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=347bp_to_AB528945_5end | |||
|description=CAGE_peak_1_at_AB528945_5end | |||
|id=chr17:72745333..72745351,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002586;6.40e-11;3!CL:0000182;1.64e-09;12!CL:0000149;2.73e-08;4!CL:0000575;5.62e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,2.03e-11,3;CL:0000182,9.48e-10,12;CL:0000149,1.17e-08,4;CL:0000575,9.03e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.91e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;2.29e-08;4!DOID:1612;2.29e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.20e-08,4;DOID:1612,1.20e-08,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;6.40e-11;3!UBERON:0001782;6.40e-11;3!UBERON:0002365;1.14e-10;31!UBERON:0002330;1.14e-10;31!UBERON:0002107;1.08e-07;19!UBERON:0006925;1.08e-07;19!UBERON:0001829;1.48e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,2.03e-11,3;UBERON:0005424,2.03e-11,3;UBERON:0002365,4.74e-11,31;UBERON:0002330,4.74e-11,31;UBERON:0001781,1.17e-08,4;UBERON:0002107,6.72e-08,19;UBERON:0006925,6.72e-08,19;UBERON:0008836,6.72e-08,19;UBERON:0001829,1.07e-07,2;UBERON:0002530,7.14e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0.61560529038394,0.204000691244253,0,0,0.410623275218653,0.627713197974014,0.0764134057479513,0.164201178899891,0.157421562627358,0.393364276848904,0,0,0,0.90361775633475,2.21852406100073,0.0774672005803016,0.142169232487422,0,0.553995408531877,0.200544447470142,0.651032612147555,0.447830948479849,0,0,0.581592955118259,0.755751887377619,0.242584061187816,0.464858073811369,0.822335776043652,0.309706370895104,0.575384784644301,0.256160706529101,0,0.689491361473237,0.645484683583826,0,0.376484679085209,0.272906150057846,0.449446968890169,0.918251677112708,0,0,0.329851300186716,0.199463657621632,0.852449501065388,0.290209238628584,0.56738522469114,0,0.251248665256743,0.521482918420201,0.217188844705117,1.21079900526674,0.368277635987565,0,0,0,0.419317291016752,0.673971786878971,0.300353785683013,0.16072558669708,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0.786021525498329,0.411202997999018,0.167186495390678,0,0,0,1.33692548262208,0,0.664601683750863,0,0.384273959177026,0.650296737799391,0.822189523018381,1.38175008892924,1.44901542867526,0.296573126324121,0.267540828089713,1.04535523804977,0.339928028092699,0,0.34362744548263,0.759059076058509,0.318565414324097,0,0.950452044448374,0.451725357233318,0.639933055772092,0,0.473554504088034,0.821127996921047,0.604820229674197,0.267440195783507,0.144824403882799,0,0,0,0,0,0.724232594804119,0,0,0.0945348171640679,0.221729397462564,0.351339142772504,0.72038491523742,2.18577172975525,1.11235332835329,0.324547393654683,0,0.132957960518865,0.476981248610684,0.571994910780128,0,0,0,0.347140501607594,0,0,0.275118041940067,0,0,0.71153252537342,0,0,0,0,0.367663080345869,0,0,0.44905874525234,0.112611480483322,0,0,0.366403487860815,0,0,3.05265836499774,0,0,0,0,0,0,0,0,0,0,0,0.454072282934794,0,0,0,0,0,0.352303495931295,0,0,0,0.491337269247072,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0.340296549480063,0,0,0,0,0.103052529238439,0.257640540045629,0.18611685633159,0,0,0.252433774244115,0,0.161646056818812,0,0.201504196455281,0.169560592310488,0.57978255948989,0.545492241181669,0,0.365921118388786,0.265059536642971,0.348581828608555,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0.473227200159376,0.168584690078102,0.482022059766964,0.55146986366197,0.435758888184812,0.71181185733329,1.07865046528132,0.588664395376038,0.769494313892781,0,0,0.8231480226628,0,1.26755034821831,1.96565443335525,0,0.441463099414651,1.10689594688802,0.171567810298526,0.219500570817251,0,0.201057944823262,1.38882667737794,0,0,0,0,0.234817388471643,0.144366447761074,0,0.190254152234598,1.58040879591855,0.858486162094873,0,0,0.148631162288728,0,0.503946384596579,0.283550194484773,0,0.290633938513962,0,1.47798971368783,0.704387472105808,1.03664057770386,1.00883967391873,0.75745460055828,0.253991577168676,0.763976851116555,0,0,0.205654985406647,0,0.285826432630578,0.336393253036082,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0.325736184293735,0,0.791951872933429,0.602878754119172,0,1.69954085009497,0,0,0,0.718874566474748,0,0,0.434343920002738,0.205476322550383,0.358121926479791,2.01753259188349,0.394061520403854,0.862510299438069,0.641715181398742,0,0,0,0.670065061337395,0,0.749007023947182,8.97484377612075,0.828831026872071,0,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0,0,0.173767228936166,3.91602314925481,0.686286847621712,1.03384013061444,0.647142602455851,0.74709290462411,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0,0,0,0.116210378459959,0.604297247958111,0,0.184161977871793,0,0,0,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0.223874754722178,0.219259876645935,0,2.56450125116389,1.64007322849853,1.95227036798582,0.9273691048295,0.27470839445503,0.330037999682352,0,0,0,0,0,0,0,0.214840489736547,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0.767693373934002,0,0,0,0,0,0,0,0,0,0.975267478179181,0,1.05650146756755,0.272999822815972,0.424216295861138,0,0,0,0,0,0,0,0.6196469961995,0.281695602532241,0,0.392996164052485,0,0,0,0,0.379473173765715,0.349934720244983,0.288666338176536,0.670302275535787,0,0.470719003883896,0.43050537267123,1.68471475667626,0,0.229723400206959,0,0,0.569647187174163,0,0.411362273086194,1.94541993357815,0.540031437238115,0,0,0,0.245040215981032,0.371606350251437,0.144269212976445,0.142283686696828,0.478278818186467,0.399158742865633,1.7235483311913,0.846694330895531,0.649243880549111,1.12318871245384,0.228234679033192,1.09675927041116,0,1.69291777801603,0.1605880751037,0.605399121573143,0,0.343505344755765,0.921722292925374,0,0.166849141711909,0,0,0,0.270455678475983,0,0,0.935702702041099,0,0,1.00299045849731,0.284136146806413,0,0.593929361665277,0,0,0.140669416410513,0.111308705022906,0,0.211125408127993,0,0,0.251932747854276,0,0,0,0.269605053441981,0.895105873378046,0.511572370226872,0,0,0,0,0.463840490809256,0,1.82299432759663,4.37299999980979,0,0.455173793141999,0,0.236387681767936,0,0,0,0,0.482385754501632,0,0.110579259931225,0.591095237907095,0.658156191461918,0.435753854075961,1.53366118706464,0.384751292518985,0.455768223388005,1.1528195219403,0.897576444097721,0.977826347298073,0,0,0.533034776018635,1.02193298195737,0.31396051279005,0,0,0.588187602953219,0.503464760927528,0.189753732724185,0.317873157960757,0,0.326465616318295,0.565412285735763,0.216388639742091,0.995261931078505,0.707660516026713,0,0,0.123563938946503,0,0.202203398942031,0,0,0,0.782658475728359,0.485560759068186,2.36750641709634,0,0.30607276163049,0.063186579628488,0.300646838828985,0.311064574191741,0,0,0,0,0,0.554698692052555,0.520679215005393,0.391969589657511,0.435296032902013,0.17472666824203,0.171986032471617,0.580537987734511,0.365446585430928,0.410577285266046,1.06687918137261,0.264768380074501,0.225980740780532,0,0,0,0.586654148204409,0.240476460754601,0.640358984218058,0,0.144090417154106,0.229073192331831,0.171594997861965,0,0,0.942776138467182,0.815425236441684,1.255234155748,0.101998217636322,0,0.600420288709789,0.136905378891993,0,0,0.525774708558629,0,0.229160424011684,0,0.399358000997982,0.429226048136571,0,0,0,0,1.10296455230113,1.64831716762333,1.81989568406299,2.75596948241297,0.677386656526276,0,0.272406812223151,0,0.275078873194468,0,0,0,0.303747783290123,0.335434687599266,0.630445658393585,0.314727528809989,0,0,0,0,0,0,0,0,0.653174720218818,0,0.246277562248017,0.170388021785422,0,1.61207457045891,0,0,0.13223260174269,0.171086837884329,0,0,0,0,0,0.988058159489721,0.121792598380896,0,0,0,0,0.327872630709804,0,0,0.610131324509816,0.1251909307065,0,0.110929051536852,0.496771223531068,0.691743174681154,0.124980407962107,0,0,0,0.936669811613763,0.28984205722165,0,0,0,0.189403005275089,0.50313580350515,1.77962244319307,0,0.151230923763239,0,0,0,0,0,0,0,0,0.601030435988874,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0.857766365499703,0,0,0,0,0.358177682162975,1.85280868296583,1.53498834705095,0.353378291891762,1.54331230616732,1.35153952522458,2.56241518587947,0,0,0,0,0,0,0.327609848846413,0.491545817507439,0.211312123358627,0.19998739585493,0.320075189082423,0.172214979660816,0.567515953566836,0,0.419638523158333,0.622077260032973,0,0.431299245586727,0,0,0,0,0.247871528518004,0,0.318004350653419,0,0,0.352675943690684,0.3062454773532,0.321146125482298,0,0,0,0,0.553258019713743,0.161475645631851,0,0.588886311006154,0.11796972334774,0.733714394086716,0,0,0,0,0.0752103283492573,0.20170506870352,0,0.523813388962845,0.327543835020193,0,0.337687923091973,0,0.413373593002368,0.19024743058172,0,1.64477330057155,0,0,0.255524855279191,0,0,0,0,0,0.115233987555779,0.342976018874837,0.203909198930495,0.460409414939944,0.236387681767936,0.222462803784138,0.313972371402056,0.314231179832004,0,0,2.15927591218621,0,0.500335809236594,0.158013611732727,0,0.173858272302579,0,0.62164849248911,0.51215543128185,0,1.29068207646083,0.118332000730565,0.426067023795788,1.27016115057279,0,0.31020638566432,0,0.559277158988962,0.490751168076215,1.34109717480496,0,0,0,0,0,0,0.118920090777569,0.11294608203896,0,0.150962843566674,2.2380505851304,1.96703604453562,0,0,0,0,0.297046400327086,0,0,0.281951753939561,0.193373663920732,0.499705779624645,0.178553938605658,0,0.160482733378337,0,1.37618785021362,0.143339583151451,0,0.271965960763659,0,0,0.371995018166751,0,0.432626562123789,0.126166424835079,0.437062287854782,0.506794004045748,0,0.26721740526556,0.18378979906969,0.250707539292375,0.227336094654718,0,0,0.20686599172379,0.426467963801962,0,0.904244737704086,0.620747142958579,0.112131862580613,0.25458863311266,0.202117188958219,0.653150243690884,0,0.606168477131288,0.358611026963382,0,0.162806537221949,0,0,0.269475606319761,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p1@AB528945 | |||
}} |
Revision as of 17:14, 20 January 2014
Short description: | p1@AB528945 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB528945_5end |
Coexpression cluster: | NA |
Association with transcript: | 347bp_to_AB528945_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 2.03e-11 | 3 |
hepatocyte | 9.48e-10 | 12 |
visual pigment cell | 1.17e-08 | 4 |
corneal epithelial cell | 9.03e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 2.03e-11 | 3 |
presumptive retinal pigmented epithelium | 2.03e-11 | 3 |
exocrine gland | 4.74e-11 | 31 |
exocrine system | 4.74e-11 | 31 |
layer of retina | 1.17e-08 | 4 |
liver | 6.72e-08 | 19 |
digestive gland | 6.72e-08 | 19 |
liver bud | 6.72e-08 | 19 |
major salivary gland | 1.07e-07 | 2 |
gland | 7.14e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.20e-08 | 4 |
breast cancer | 1.20e-08 | 4 |