FFCP PHASE1:Hg19::chr17:49198216..49198236,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9043 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14524 | |||
|TSSclassifier=strong | |||
|UniProt=A6H8U5,O60271 | |||
|association_with_transcript=0bp_to_ENST00000262013,ENST00000357122,NM_001130527,NM_001130528,NM_003971,uc002itb.2,uc002itc.2,uc002itd.2_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_SPAG9_5end | |||
|id=chr17:49198216..49198236,- | |||
|ontology_enrichment_celltype=CL:0000766!3.31e-18!76;CL:0000557!2.89e-16!71;CL:0002057!4.10e-16!42;CL:0000860!4.95e-15!45;CL:0002009!9.12e-15!65;CL:0002194!1.01e-13!63;CL:0000576!1.01e-13!63;CL:0000040!1.01e-13!63;CL:0000559!1.01e-13!63;CL:0000839!1.69e-13!70;CL:0000763!4.08e-08!112;CL:0000049!4.08e-08!112;CL:0000738!1.13e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.16e-18;33!CL:0002057;2.16e-18;33!CL:0000473;3.66e-14;39!CL:0000234;3.66e-14;39!CL:0000576;3.61e-10;48!CL:0000766;1.17e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.28e-19,72;CL:0000557,3.16e-17,67;CL:0000860,4.10e-16,42;CL:0002057,4.10e-16,42;CL:0002009,1.01e-15,61;CL:0000473,3.89e-15,48;CL:0000234,3.89e-15,48;CL:0002194,1.23e-14,59;CL:0000576,1.23e-14,59;CL:0000040,1.23e-14,59;CL:0000559,1.23e-14,59;CL:0000839,2.63e-14,66;CL:0000763,2.03e-08,108;CL:0000049,2.03e-08,108;CL:0000738,6.65e-08,136 | |||
|ontology_enrichment_development_v019=CL:0002057;2.40e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.63e-13!80;UBERON:0002390!3.10e-13!102;UBERON:0003061!3.10e-13!102;UBERON:0001474!5.05e-13!86;UBERON:0004765!9.23e-13!101;UBERON:0001434!9.23e-13!101;UBERON:0002193!4.96e-11!112;UBERON:0000062!1.87e-10!511;UBERON:0007023!1.97e-10!115;UBERON:0002405!2.61e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.29e-14,76;UBERON:0002390,8.88e-14,98;UBERON:0003061,8.88e-14,98;UBERON:0001474,1.17e-13,82;UBERON:0001434,1.69e-12,100;UBERON:0004765,6.23e-12,90;UBERON:0002193,1.92e-11,108;UBERON:0002405,7.49e-11,93;UBERON:0007023,3.39e-10,114 | |||
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| |||
|short_description=p1@SPAG9 | |||
}} |
Revision as of 16:20, 20 January 2014
Short description: | p1@SPAG9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPAG9_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000262013, ENST00000357122, NM_001130527, NM_001130528, NM_003971, uc002itb.2, uc002itc.2, uc002itd.2_5end |
EntrezGene: | SPAG9 |
HGNC: | 14524 |
UniProt: | A6H8U5O60271 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.28e-19 | 72 |
granulocyte monocyte progenitor cell | 3.16e-17 | 67 |
classical monocyte | 4.10e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.10e-16 | 42 |
macrophage dendritic cell progenitor | 1.01e-15 | 61 |
defensive cell | 3.89e-15 | 48 |
phagocyte | 3.89e-15 | 48 |
monopoietic cell | 1.23e-14 | 59 |
monocyte | 1.23e-14 | 59 |
monoblast | 1.23e-14 | 59 |
promonocyte | 1.23e-14 | 59 |
myeloid lineage restricted progenitor cell | 2.63e-14 | 66 |
myeloid cell | 2.03e-08 | 108 |
common myeloid progenitor | 2.03e-08 | 108 |
leukocyte | 6.65e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.29e-14 | 76 |
hematopoietic system | 8.88e-14 | 98 |
blood island | 8.88e-14 | 98 |
bone element | 1.17e-13 | 82 |
skeletal system | 1.69e-12 | 100 |
skeletal element | 6.23e-12 | 90 |
hemolymphoid system | 1.92e-11 | 108 |
immune system | 7.49e-11 | 93 |
adult organism | 3.39e-10 | 114 |