FFCP PHASE1:Hg19::chr17:48261981..48262027,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr17:48261981..48262027,- | |||
|id=chr17:48261981..48262027,- | |||
|ontology_enrichment_celltype=CL:0000055!1.62e-41!180;CL:0000057!4.05e-23!75;CL:0000183!2.26e-19!59;CL:0000680!6.55e-19!57;CL:0000056!6.55e-19!57;CL:0000355!6.55e-19!57;CL:0000187!2.40e-18!54;CL:0000393!2.11e-15!60;CL:0000211!2.11e-15!60;CL:0000192!1.63e-14!42;CL:0000514!1.63e-14!42;CL:0000359!3.63e-10!32;CL:0000048!5.08e-10!430;CL:0000723!1.22e-09!436;CL:0002371!1.85e-09!591;CL:0000034!3.47e-09!444;CL:0000144!2.80e-08!625;CL:0002334!8.00e-08!12;CL:0002620!8.66e-08!23;CL:0000222!2.06e-07!119;CL:0000499!8.53e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000187;7.99e-13;55!CL:0000192;1.74e-12;43!CL:0000359;2.06e-11;32!CL:0000134;2.21e-11;55!CL:0000723;3.32e-10;61!CL:0000057;3.97e-10;73!CL:0000048;6.03e-10;58!CL:0000393;9.16e-10;61!CL:0000211;9.16e-10;61!CL:0002320;2.83e-09;188!CL:0002334;3.71e-09;12!CL:0002620;1.29e-07;23!CL:0002494;2.30e-07;16!CL:0000499;2.43e-07;28!CL:0000034;2.80e-07;69!CL:0000327;3.82e-07;15!CL:0000349;5.62e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.95e-25,76;CL:0000187,1.95e-22,55;CL:0000680,2.24e-22,58;CL:0000056,2.24e-22,58;CL:0000355,2.24e-22,58;CL:0000048,1.37e-18,427;CL:0000393,2.15e-18,61;CL:0000211,2.15e-18,61;CL:0000192,9.54e-18,43;CL:0000514,9.54e-18,43;CL:0000723,1.57e-17,433;CL:0000034,3.54e-16,441;CL:0000359,4.73e-12,32;CL:0002334,3.37e-09,12;CL:0000222,3.74e-09,121;CL:0002320,1.02e-07,361;CL:0002620,1.54e-07,23;CL:0002494,1.80e-07,16;CL:0000499,2.75e-07,28;CL:0000327,4.00e-07,15;CL:0000349,5.80e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000514;1.74e-12;43!CL:0000355;6.49e-12;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.84e-22!83;UBERON:0002329!7.84e-22!83;UBERON:0003077!7.84e-22!83;UBERON:0003059!7.84e-22!83;UBERON:0007282!7.84e-22!83;UBERON:0009618!7.84e-22!83;UBERON:0007285!7.84e-22!83;UBERON:0004290!2.52e-19!70;UBERON:0001134!3.01e-19!61;UBERON:0002036!3.01e-19!61;UBERON:0003082!3.01e-19!61;UBERON:0002385!4.33e-19!63;UBERON:0001015!4.33e-19!63;UBERON:0000383!4.33e-19!63;UBERON:0005256!1.15e-16!143;UBERON:0000486!2.32e-15!82;UBERON:0002100!6.36e-12!216;UBERON:0000475!2.69e-11!365;UBERON:0003104!2.15e-08!238;UBERON:0009142!2.15e-08!238;UBERON:0000481!5.10e-08!347;UBERON:0004872!1.65e-07!84;UBERON:0000490!1.68e-07!138;UBERON:0002199!2.73e-07!45;UBERON:0002416!2.73e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;4.45e-09;198!UBERON:0002385;1.76e-08;31!UBERON:0001015;1.76e-08;31!UBERON:0000383;1.76e-08;31!UBERON:0002204;4.53e-07;70!UBERON:0003104;5.58e-07;7!UBERON:0009142;5.58e-07;7!UBERON:0003688;9.49e-07;6!UBERON:0002358;9.49e-07;6!UBERON:0003684;9.49e-07;6!UBERON:0001178;9.49e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.85e-22,62;UBERON:0002036,1.85e-22,62;UBERON:0003082,1.85e-22,62;UBERON:0002385,4.01e-21,64;UBERON:0001015,4.01e-21,64;UBERON:0000383,4.01e-21,64;UBERON:0007524,4.37e-21,73;UBERON:0002329,5.39e-21,71;UBERON:0003059,5.39e-21,71;UBERON:0007282,5.39e-21,71;UBERON:0004290,5.39e-21,71;UBERON:0009618,5.39e-21,71;UBERON:0003077,2.08e-20,72;UBERON:0007285,2.08e-20,72;UBERON:0007503,9.94e-20,78;UBERON:0000486,3.44e-17,83;UBERON:0005256,1.76e-13,122;UBERON:0003104,1.98e-13,160;UBERON:0009142,1.98e-13,160;UBERON:0004872,3.70e-09,83;UBERON:0000490,5.60e-09,148;UBERON:0002384,2.99e-08,371;UBERON:0002100,1.13e-07,199;UBERON:0002049,2.92e-07,78;UBERON:0007798,2.92e-07,78;UBERON:0004535,3.23e-07,109;UBERON:0002199,5.72e-07,46;UBERON:0002416,5.72e-07,46;UBERON:0001637,6.74e-07,42;UBERON:0003509,6.74e-07,42;UBERON:0004572,6.74e-07,42;UBERON:0000926,7.50e-07,315;UBERON:0004120,7.50e-07,315;UBERON:0006603,7.50e-07,315;UBERON:0003688,9.61e-07,6;UBERON:0002358,9.61e-07,6;UBERON:0003684,9.61e-07,6;UBERON:0001178,9.61e-07,6 | |||
|phase1_expression=78.4850598448805,26.7625654863729,60.1875305489797,30.0219895059391,55.870136803411,28.7871712953122,12.6649939084155,1.89515962028049,0.522371256399677,1.47440361900905,0.697801167972428,5.02415155899396,11.605747042052,3.21792517696121,3.64537113300707,6.72325146451775,7.23233433628772,3.65155045193687,5.85519358548608,8.00286877499121,9.38403179723564,8.46327747990837,1.43117993565528,0.958120975510189,2.25976751270645,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,4.87613732627923,9.38981203585091,12.786256184353,25.3007406669196,47.1257635997736,11.2980284789442,24.6538643585841,19.4653948121054,3.49778823507051,11.5299286680533,7.55379156960884,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,100.88530619415,13.2962037247809,4.36950296683622,18.9312169694217,10.6400514659507,10.0921968025615,27.7547388897233,39.2201401983284,2.17847724779836,5.25371621071783,2.61539044981534,21.0386824426455,20.1661573568,1.17160715916898,0,1.1409436430889,0.298897361103602,0.822041490506354,0.323745888736263,1.26405726032024,2.44985005505872,1.47401180774122,0.619954687054593,39.2040942903078,37.5845732503406,4.55080680969013,21.5585442544872,2.52504170931099,0.500474079487857,0.554128230968366,34.6792320495862,45.3601937782549,32.4514207238249,13.4984297960425,9.14887142013196,50.826658538819,34.7568317901681,13.5040993237981,15.251774327289,8.75977836155139,25.4980093174278,30.2109634711867,13.0565586916006,5.3011092591264,23.7488738497132,11.8001621477733,15.9754316632476,8.7654325458047,10.3431961309397,0,1.36373060295417,0,0.121973706129595,0,0.116193942869518,0.310983165046111,0.504641701751257,0,3.12899064659632,8.36213219650751,1.38134921352481,6.03678306441573,7.21879481669586,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,22.4386838085513,55.562491529739,92.6154881728914,0,0,0,0,0,2.74508496477641,0.109750285408626,0,0,0.0925884451585296,1.3032332212413,1.03993478527958,2.88662684050547,0.811512834825538,12.9149563659404,0.144366447761074,0,0,0,0,0.246217006087397,0,0,0.93733833986777,1.17587489739202,0.283550194484773,0,0,0.383382679165211,0,0,0.207328115540772,0,0,0.190493682876507,0,0,1.71072446022705,0.719792448923265,0,0,2.46688385559794,6.10344096366592,4.18028229179415,56.8795549334222,21.4593867511129,6.762422020448,21.8069255599594,15.6011155367049,6.17297698229141,5.67396528093113,1.5985330740966,34.6006744652717,174.724156936045,18.1112874091769,15.6353368460993,30.9190995406015,9.50342247520115,6.02878754119172,2.61460037580088,1.89948683245908,0,0,0,52.238218497165,65.4713034254449,1.42636905040718,7.09428402671138,3.08214483825575,0.716243852959582,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,3.43536176813592,2.50085260529839,0.813795071099207,117.711507626437,66.7324418101385,55.511250091945,24.8339799784552,36.1135319673263,0,2.0694614258501,14.6129631677796,8.29661258437664,4.08352987999989,16.6430983843329,36.0300595001399,0,0,0,2.12189300012382,59.9167582237789,7.55975733324201,89.3188108147597,61.384789315225,65.3938020029061,94.1822747029402,33.2609711893357,126.270328097732,17.8101679733989,3.70103265126373,10.6537035187876,6.98080826117378,4.15403543346897,9.18061989833678,0,0.200506470303285,0,15.0406927095635,6.00900854422166,8.1297137274843,0,0.231046011313244,1.56869953835371,1.46139224653261,0.316654886678627,0,0,1.51141141271498,0,8.94123243894714,4.51520796469368,0,0,0.671624264166535,0,0,0.256450125116389,1.31205858279882,0.976135183992909,0.824328093181778,2.93022287418699,1.23764249880882,0.574265537996172,1.30012049207304,57.8462147438974,3.67348729510063,5.23765298189791,5.83313963959292,3.44591431211326,7.94909812025225,7.54086808353988,3.15338521439573,36.3250705438688,0.165284915360978,0.576570202095319,0.255225424989168,0,4.18360994367557,25.4998000932818,1.3940745403212,2.15623506123262,7.45228442443831,6.08953094452551,2.03856641014312,1.28812398067792,10.048275972711,12.3387975640303,23.2568836587066,23.03080121802,6.84702380854273,3.5002357271853,6.27958912159384,21.0450775372478,18.6685180220517,12.1346774416057,4.44801459461295,1.58510321173008,2.94880919367287,22.4311519981212,2.43713489631284,1.05650146756755,8.87249424151907,19.6553550415661,3.39024349860728,7.71911480964574,3.3171948762061,1.75380354101505,9.83918408253369,13.7737897929793,7.10186319369464,4.02770547529675,7.60578126837052,6.59692220138637,30.2607046320413,7.133421029625,1.77380532035299,5.06658324714394,6.91519275215794,5.31262443272001,1.39973888097993,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,1.43246690842614,0.890894042497916,0,0,0,0,0,0,0.19924798825107,0.2762839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| |||
|short_description=p@chr17:48261981..48262027,- | |||
}} |
Revision as of 16:10, 20 January 2014
Short description: | p@chr17:48261981..48262027, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48261981..48262027, - |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.95e-25 | 76 |
muscle cell | 1.95e-22 | 55 |
muscle precursor cell | 2.24e-22 | 58 |
myoblast | 2.24e-22 | 58 |
multi-potent skeletal muscle stem cell | 2.24e-22 | 58 |
multi fate stem cell | 1.37e-18 | 427 |
electrically responsive cell | 2.15e-18 | 61 |
electrically active cell | 2.15e-18 | 61 |
smooth muscle cell | 9.54e-18 | 43 |
smooth muscle myoblast | 9.54e-18 | 43 |
somatic stem cell | 1.57e-17 | 433 |
stem cell | 3.54e-16 | 441 |
vascular associated smooth muscle cell | 4.73e-12 | 32 |
preadipocyte | 3.37e-09 | 12 |
mesodermal cell | 3.74e-09 | 121 |
connective tissue cell | 1.02e-07 | 361 |
skin fibroblast | 1.54e-07 | 23 |
cardiocyte | 1.80e-07 | 16 |
stromal cell | 2.75e-07 | 28 |
extracellular matrix secreting cell | 4.00e-07 | 15 |
extraembryonic cell | 5.80e-07 | 19 |