FFCP PHASE1:Hg19::chr17:48261972..48261979,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C208 | |||
|description=CAGE_peak_at_chr17:48261972..48261979,- | |||
|id=chr17:48261972..48261979,- | |||
|ontology_enrichment_celltype=CL:0000055!5.76e-26!180;CL:0000057!3.85e-19!75;CL:0000183!3.09e-11!59;CL:0000187!3.44e-10!54;CL:0000680!7.44e-10!57;CL:0000056!7.44e-10!57;CL:0000355!7.44e-10!57;CL:0000048!1.78e-09!430;CL:0000723!7.16e-09!436;CL:0000393!8.15e-09!60;CL:0000211!8.15e-09!60;CL:0002620!1.91e-08!23;CL:0000034!2.03e-08!444;CL:0000192!1.81e-07!42;CL:0000514!1.81e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000632;5.67e-10;3!CL:0000135;1.79e-09;3!CL:0000388;1.79e-09;3!CL:0000197;7.27e-08;6!CL:0000098;7.27e-08;6!CL:0002167;7.27e-08;6!CL:0002569;9.60e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.76e-12,76;CL:0000632,5.96e-10,3;CL:0000135,1.19e-09,3;CL:0000388,1.19e-09,3;CL:0000197,6.68e-08,6;CL:0000098,6.68e-08,6;CL:0002167,6.68e-08,6;CL:0002569,7.85e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!1.68e-10!61;UBERON:0002036!1.68e-10!61;UBERON:0003082!1.68e-10!61;UBERON:0002385!7.79e-10!63;UBERON:0001015!7.79e-10!63;UBERON:0000383!7.79e-10!63;UBERON:0004290!6.17e-09!70;UBERON:0000914!8.10e-09!83;UBERON:0002329!8.10e-09!83;UBERON:0003077!8.10e-09!83;UBERON:0003059!8.10e-09!83;UBERON:0007282!8.10e-09!83;UBERON:0009618!8.10e-09!83;UBERON:0007285!8.10e-09!83;UBERON:0000486!1.07e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0003104;3.81e-10;7!UBERON:0009142;3.81e-10;7!UBERON:0007846;1.79e-09;3!UBERON:0000043;1.79e-09;3!UBERON:0007845;1.79e-09;3!UBERON:0003422;9.60e-08;6!UBERON:0002331;6.03e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.19e-09,3;UBERON:0000043,1.19e-09,3;UBERON:0007845,1.19e-09,3;UBERON:0003422,7.85e-08,6;UBERON:0002331,5.25e-07,10;UBERON:0000358,5.25e-07,10;UBERON:0000307,5.25e-07,10;UBERON:0000091,5.25e-07,10;UBERON:0000087,5.25e-07,10;UBERON:0007010,5.25e-07,10;UBERON:0007806,5.25e-07,10;UBERON:0008780,5.25e-07,10;UBERON:0005728,5.25e-07,10 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.563817616383885,0,0.446961094427288,6.10636966870258,2.53299878168311,0,0,0,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0.487932798790507,0.369363174230364,1.63200552995402,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02290049474824,0.722878304769133,1.50401373190767,0,0,0,0.283604451492204,0.443458794925128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.633152558322899,0.529636723252875,1.72101972449288,0.354668382198357,0,2.1349799145941,1.97334038733728,0,0.538842688278752,0.326923806226917,0.756787138224657,2.30470369792,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0.122834317311768,0,0,0.741800787835671,0,0.718618141816238,0,0,0,3.95079858792754,1.22595118319608,2.85452311922534,1.02088964844019,0.89694817844431,2.13557388818567,0.423863802319124,0.600182192168805,0.92747276314595,1.54584324027377,1.11670113798954,0.843881661206331,0.487185025805993,0.252433774244115,0.368199594569197,0.161646056818812,0.355009592516614,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,3.2925920906512,16.1709582524096,0,0,0,0,0,0.171567810298526,0,0,0,0,0.325808305310325,3.11980435583874,1.44331342025273,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0.87192013766656,0.1466765716419,0.775630294546667,0,0.845302752556,0.26593811658487,0,0,0,0,0.57191197463259,6.51145926469732,1.64648067356154,0.65147236858747,1.77695974371273,0,0.602878754119172,0,0.199945982364114,0,0,0,1.4377491329495,5.7430967917057,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,1.08506009479894,3.95144636908534,7.67244651827796,2.83864347061082,1.40569697991256,1.20378439891088,0,0,0.664225598535437,0.368738337083406,0.260650843404249,1.56640925970192,2.74514739048685,0,0,0,0,1.66435439510497,0.30239029332968,0.744323423456331,1.2276957863045,3.36792113319688,0.640695746278505,0,4.98647155545183,0,0,0.355123450626254,0.164254312027618,0,0.116210378459959,0,0,0,0.459257792658427,0.364182336013434,0.524497659837696,0,0,0.784349769176855,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0.366277859273374,0.082509499920588,0,0,0,0.096670718292122,0.308097234229289,0.307007349452259,0.137836572484531,0.429680979473094,0.290033387828457,0.596586391912706,0.801288320820636,0,0,0,0,1.39453664789186,1.25924938732256,0,0,0.532306030317022,0,0.18532421910392,0.143124886741991,0.372158369359667,0.316379424718726,1.90630193923825,0.767693373934002,0.42793898803392,0,0,0.719489830333259,1.09814811894422,0.824686816419805,0.202182481573316,0,0.421258456238981,1.46290121726877,0.487426979262569,0,0,0.707027159768564,0,0.551365343546124,0.66343897524122,0,0,1.9676842561399,0,0,0.563391205064483,0.286822704408103,0.88424136911809,0.35667105148125,0,0.422215270595328,0.329294892959902,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846452843541768,0.113942055847001,0,0,0,0,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,4.81546588379273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,2.48578814858586,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0.201550417460179,6.48539790376326,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0.25426853765475,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895528817321244,1.40227985908335,0,0.189403005275089,0.50313580350515,0,0,0.907385542579434,0.621748802331122,0.147855149989634,0,0,0.465788870628778,0.829412415681711,0,0.521745061811734,2.25386413495828,1.14241563650639,0.406870733204662,0.363697318405119,0.214821114084977,0.464033759878494,0.796191777397232,0.400027764663154,0.686791410365586,1.34699795506368,1.26184898228651,0,0.214441591374926,0,0.226705925512272,0.231522474323834,0,0.179088841081487,0.617602894321944,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13503190713367,0,0,0,0,0,0,0,0,0,0,0,5.40607396110812,0,0,5.99549104274163,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4324388592045,0,0.397832444232549,0,1.61364054962816,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,8.21842848458546,0,0,0,0,0,0.173858272302579,3.20684545892101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4794432940146,36.4283244794355,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,2.9585900930838,5.09781344063451,0,0,0,0,0,0,1.46067277649303,0,0,0.157771562193185,0,0.436350690340377,1.058053681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| |||
|short_description=p@chr17:48261972..48261979,- | |||
}} |
Revision as of 16:10, 20 January 2014
Short description: | p@chr17:48261972..48261979, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48261972..48261979, - |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.76e-12 | 76 |
hepatic stellate cell | 5.96e-10 | 3 |
fibrocyte | 1.19e-09 | 3 |
tendon cell | 1.19e-09 | 3 |
receptor cell | 6.68e-08 | 6 |
sensory epithelial cell | 6.68e-08 | 6 |
olfactory epithelial cell | 6.68e-08 | 6 |
mesenchymal stem cell of umbilical cord | 7.85e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.19e-09 | 3 |
tendon | 1.19e-09 | 3 |
regular connective tissue | 1.19e-09 | 3 |
mesenchyme of umbilical cord | 7.85e-08 | 6 |
umbilical cord | 5.25e-07 | 10 |
blastocyst | 5.25e-07 | 10 |
blastula | 5.25e-07 | 10 |
bilaminar disc | 5.25e-07 | 10 |
inner cell mass | 5.25e-07 | 10 |
cleaving embryo | 5.25e-07 | 10 |
connecting stalk | 5.25e-07 | 10 |
inner cell mass derived epiblast | 5.25e-07 | 10 |
extraembryonic mesoderm | 5.25e-07 | 10 |