FFCP PHASE1:Hg19::chr17:46550005..46550012,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:46550005..46550012,- | |||
|id=chr17:46550005..46550012,- | |||
|ontology_enrichment_celltype=CL:1000497!5.81e-09!18;CL:0002518!5.81e-09!18;CL:0000548!7.42e-08!679;CL:0000004!7.42e-08!679;CL:0000255!7.42e-08!679;CL:0000012!1.06e-07!682;CL:0000220!1.22e-07!246;CL:0002321!1.78e-07!248;CL:0002605!3.01e-07!3;CL:0000055!3.35e-07!180;CL:0000239!3.53e-07!3;CL:1000615!3.53e-07!3;CL:0002306!3.53e-07!3;CL:1000507!3.61e-07!12;CL:1000494!3.61e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002605;3.20e-29;3!CL:0000239;5.03e-14;3!CL:1000615;5.03e-14;3!CL:0002306;5.03e-14;3!CL:0000128;6.87e-13;7!CL:0000126;6.87e-13;7!CL:0000127;6.87e-13;7!CL:0000342;3.40e-11;1!CL:0002565;3.40e-11;1!CL:0000228;1.10e-10;1!CL:0002372;1.10e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.40e-29,3;CL:0000239,5.04e-14,3;CL:1000615,5.04e-14,3;CL:0002306,5.04e-14,3;CL:0000128,6.09e-13,7;CL:0000126,6.09e-13,7;CL:0000127,6.09e-13,7;CL:0002453,6.09e-13,7;CL:0000342,3.41e-11,1;CL:0002565,3.41e-11,1;CL:0000228,1.21e-10,1;CL:0002372,1.21e-10,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3111;4.80e-11;1!DOID:3603;4.80e-11;1!DOID:6193;1.10e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,5.05e-11,1;DOID:3603,5.05e-11,1;DOID:6193,1.77e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000058!1.84e-08!26;UBERON:0000488!6.09e-08!4;UBERON:0007625!1.28e-07!11;UBERON:0006853!3.53e-07!3;UBERON:0007685!3.53e-07!3;UBERON:0004134!3.53e-07!3;UBERON:0009773!3.61e-07!12;UBERON:0001231!3.61e-07!12;UBERON:0004810!3.61e-07!12;UBERON:0005256!4.42e-07!143;UBERON:0000475!4.50e-07!365;UBERON:0000483!6.03e-07!309;UBERON:0000119!9.59e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002394;7.91e-22;4!UBERON:0003928;7.91e-22;4!UBERON:0000058;1.92e-15;10!UBERON:0006853;5.03e-14;3!UBERON:0007685;5.03e-14;3!UBERON:0004134;5.03e-14;3!UBERON:0001280;2.06e-13;3!UBERON:0004647;2.06e-13;3!UBERON:0002294;9.69e-13;7!UBERON:0001173;9.69e-13;7!UBERON:0002506;3.40e-11;1!UBERON:0001769;3.40e-11;1!UBERON:0001282;1.10e-10;1!UBERON:0004913;1.10e-10;1!UBERON:0009842;1.10e-10;1!UBERON:0003703;1.10e-10;1!UBERON:0003704;1.10e-10;1!UBERON:0001171;1.10e-10;1!UBERON:0001172;1.10e-10;1!UBERON:0001174;1.10e-10;1!UBERON:0004914;1.10e-10;1!UBERON:0000353;2.01e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,5.47e-25,6;UBERON:0003928,5.47e-25,6;UBERON:0002294,9.11e-17,9;UBERON:0001173,9.11e-17,9;UBERON:0004912,9.11e-17,9;UBERON:0006853,5.04e-14,3;UBERON:0007685,5.04e-14,3;UBERON:0004134,5.04e-14,3;UBERON:0001280,2.82e-13,3;UBERON:0004647,2.82e-13,3;UBERON:0005171,2.82e-13,3;UBERON:0000058,2.89e-12,19;UBERON:0002506,3.41e-11,1;UBERON:0001769,3.41e-11,1;UBERON:0001282,1.46e-10,1;UBERON:0009842,1.46e-10,1;UBERON:0003704,1.46e-10,1;UBERON:0001171,1.46e-10,1;UBERON:0001172,1.46e-10,1;UBERON:0004913,1.61e-10,1;UBERON:0003703,1.61e-10,1;UBERON:0001174,1.61e-10,1;UBERON:0004914,1.61e-10,1;UBERON:0000353,2.28e-10,15;UBERON:0007499,2.71e-09,25;UBERON:0009856,6.24e-09,26;UBERON:0008835,5.61e-07,22;UBERON:0003894,5.61e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0.263766978228454,0,0,0,0.602694528023977,0,0.975865597581014,0.246242116153576,0,0,1.71741592278634,2.6006140763848,2.38531015230125,0,0.0821005894499457,0,0.786728553697808,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.886917589850256,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58891016975863,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0.538168907066586,0,0,0,0,0,0.18611685633159,0.675105328965065,0,0,0,0,0,0.10075209822764,0,0.193260853163297,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,3.25978839567199,0.439001141634502,0,0,0,0,0,1.44331342025273,0.811512834825538,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,4.21720947081732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0.144781306667579,0,0,0.112085143993527,0,0.646882724578552,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0.308419387605311,0.177561725313127,0,0.519254429183621,0,0,0,0,0.114814448164607,0,0,0.451199612907412,0.385076685522074,0.784349769176855,0,0.422206515571503,0,0,0,0,0,0,2.54876273045038,4.15538004464362,0.895499018888713,0,0,0.256450125116389,0,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0,0,0,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0,0,1.73986598415015,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0,0.563391205064483,0.286822704408103,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,2.84136146806413,0,0,0,0,0,0.111308705022906,0.329607748453519,0,0,0,0,0.102268682502155,0,0,2.15684042753584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36730467016401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45668227720456,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.416024019039416,0,0,0,0,1.0319161948297,0,0,0,0,0,0,0.548167698587004,0,0.0633107959558787,0,0,0,0,0,0,0,0,0.248505071130865,0,0,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.465788870628778,0,0,0,0,0,0,0.363697318405119,0,0,0.398095888698616,0.800055529326307,0,0,0,0,0,0,0,0,0,0.358177682162975,0,0,6.00743096215996,0.964570191354574,0,0,0,0,0,0,0,0,0,0.491545817507439,2.53574548030352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,1.03499260351932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0.778619813244484,0,0,0,0,0.863710364874486,0.47775168788705,0,0,0,0,0,0,0,0,0,0.473328002922261,0.426067023795788,0,0,0.31020638566432,1.91107787795487,0,0.490751168076215,0.121917924982269,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0.325613074443898,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:46550005..46550012,- | |||
}} |
Revision as of 15:59, 20 January 2014
Short description: | p@chr17:46550005..46550012, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:46550005..46550012, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.40e-29 | 3 |
brush border epithelial cell | 5.04e-14 | 3 |
kidney cortex tubule cell | 5.04e-14 | 3 |
epithelial cell of proximal tubule | 5.04e-14 | 3 |
oligodendrocyte | 6.09e-13 | 7 |
macroglial cell | 6.09e-13 | 7 |
astrocyte | 6.09e-13 | 7 |
oligodendrocyte precursor cell | 6.09e-13 | 7 |
pigment cell (sensu Vertebrata) | 3.41e-11 | 1 |
iris pigment epithelial cell | 3.41e-11 | 1 |
multinucleate cell | 1.21e-10 | 1 |
myotube | 1.21e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
bile duct | 5.47e-25 | 6 |
digestive system duct | 5.47e-25 | 6 |
biliary system | 9.11e-17 | 9 |
biliary tree | 9.11e-17 | 9 |
biliary bud | 9.11e-17 | 9 |
renal cortex tubule | 5.04e-14 | 3 |
region of nephron tubule | 5.04e-14 | 3 |
proximal tubule | 5.04e-14 | 3 |
liver parenchyma | 2.82e-13 | 3 |
liver lobule | 2.82e-13 | 3 |
hepatic duct | 2.82e-13 | 3 |
duct | 2.89e-12 | 19 |
iris epithelium | 3.41e-11 | 1 |
iris | 3.41e-11 | 1 |
intralobular bile duct | 1.46e-10 | 1 |
acinus | 1.46e-10 | 1 |
intrahepatic bile duct | 1.46e-10 | 1 |
portal lobule | 1.46e-10 | 1 |
hepatic acinus | 1.46e-10 | 1 |
hepatopancreatic ampulla | 1.61e-10 | 1 |
extrahepatic bile duct | 1.61e-10 | 1 |
common bile duct | 1.61e-10 | 1 |
duodenal papilla | 1.61e-10 | 1 |
parenchyma | 2.28e-10 | 15 |
epithelial sac | 2.71e-09 | 25 |
sac | 6.24e-09 | 26 |
hepatic diverticulum | 5.61e-07 | 22 |
liver primordium | 5.61e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 5.05e-11 | 1 |
mucinous cystadenocarcinoma | 5.05e-11 | 1 |
epithelioid sarcoma | 1.77e-10 | 1 |