FFCP PHASE1:Hg19::chr17:46276793..46276808,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:46276793..46276808,- | |||
|id=chr17:46276793..46276808,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002262;2.67e-08;2!CL:1000398;2.67e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,2.48e-08,2;CL:1000398,2.48e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006298;2.75e-15;1!UBERON:0008801;2.75e-15;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;1.60e-16;14!DOID:1325;3.04e-09;7!DOID:3904;3.04e-09;7!DOID:3910;1.61e-08;2!DOID:3905;2.22e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.47e-16,14;DOID:1325,3.04e-09,7;DOID:3904,3.04e-09,7;DOID:3910,1.61e-08,2;DOID:3905,2.22e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0001008!9.07e-08!45;UBERON:0001829!1.78e-07!2;UBERON:0003064!5.67e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;9.30e-29;2!UBERON:0001044;1.23e-21;6!UBERON:0003293;1.23e-21;6!UBERON:0003294;1.23e-21;6!UBERON:0010047;1.23e-21;6!UBERON:0003408;1.23e-21;6!UBERON:0000167;1.23e-21;6!UBERON:0001041;1.87e-16;14!UBERON:0001000;1.44e-15;1!UBERON:0005352;1.44e-15;1!UBERON:0001831;2.75e-15;1!UBERON:0001736;2.75e-15;1!UBERON:0001567;2.75e-15;1!UBERON:0004921;1.19e-08;33!UBERON:0004903;1.61e-08;2!UBERON:0002173;1.61e-08;2!UBERON:0002186;1.61e-08;2!UBERON:0001281;2.67e-08;2!UBERON:0003497;2.67e-08;2!UBERON:0003909;2.67e-08;2!UBERON:0003835;2.67e-08;2!UBERON:0004089;2.67e-08;2!UBERON:0002365;1.87e-07;31!UBERON:0002330;1.87e-07;31!UBERON:0000161;3.05e-07;19!UBERON:0000166;3.05e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.43e-28,2;UBERON:0001044,1.69e-21,6;UBERON:0003293,1.69e-21,6;UBERON:0003294,1.69e-21,6;UBERON:0010047,1.69e-21,6;UBERON:0000167,1.69e-21,6;UBERON:0001000,1.34e-15,1;UBERON:0005352,1.34e-15,1;UBERON:0001736,3.17e-15,1;UBERON:0006298,3.17e-15,1;UBERON:0001831,3.66e-15,1;UBERON:0001567,3.66e-15,1;UBERON:0008801,3.66e-15,1;UBERON:0003408,3.58e-13,10;UBERON:0004903,1.61e-08,2;UBERON:0002173,1.61e-08,2;UBERON:0002186,1.61e-08,2;UBERON:0001281,2.48e-08,2;UBERON:0003497,2.48e-08,2;UBERON:0003909,2.48e-08,2;UBERON:0003835,2.48e-08,2;UBERON:0004089,3.08e-08,2;UBERON:0002365,1.73e-07,31;UBERON:0002330,1.73e-07,31;UBERON:0001041,1.76e-07,87;UBERON:0000058,2.54e-07,19;UBERON:0004921,6.40e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0.402829317109147,0.760272105718513,0,0,0,0.803697554556718,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.647747748306418,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,3.40963376167696,0,0,0,0,0,0,0,0,0.19924798825107,0,0,2.86352311006033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,2.76209081994573,0,0,0,0.300646838828985,0.103688191397247,0,0,0,0,0.284609546029793,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0.137041924646751,0,0,0.391102765469606,0,0,0,0,4.58146384663663,1.88754497648161,0,0,0,0.135904206073614,0.104602846312333,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0,2.39460383124975,0,0,0.453248366080503,0.146552233678082,0,0,0,0,0,0,0.78602152549833,0.828478110694391,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0.455324382702595,0,0,0,0,0,0,0.111231401892069,0.078493092850514,0,4.48435461302062,0,0,0,0.142953088353313,0,6.85824409671939,0,0,0,0,0,2.15113679410139,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.05777061400041,0,0,1.41095188908457,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37618785021362,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0.179650404213174,0,0.611207220914332,0,0.665756774185513,0,0 | |||
|short_description=p@chr17:46276793..46276808,- | |||
}} |
Revision as of 15:59, 20 January 2014
Short description: | p@chr17:46276793..46276808, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:46276793..46276808, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 2.48e-08 | 2 |
endothelial cell of hepatic sinusoid | 2.48e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.43e-28 | 2 |
saliva-secreting gland | 1.69e-21 | 6 |
gland of oral region | 1.69e-21 | 6 |
gland of foregut | 1.69e-21 | 6 |
oral gland | 1.69e-21 | 6 |
oral cavity | 1.69e-21 | 6 |
vas deferens | 1.34e-15 | 1 |
spermatic cord | 1.34e-15 | 1 |
submandibular gland | 3.17e-15 | 1 |
submandibular gland primordium | 3.17e-15 | 1 |
parotid gland | 3.66e-15 | 1 |
cheek | 3.66e-15 | 1 |
parotid gland primordium | 3.66e-15 | 1 |
gland of gut | 3.58e-13 | 10 |
bronchoalveolar duct junction | 1.61e-08 | 2 |
alveolar duct | 1.61e-08 | 2 |
bronchiole | 1.61e-08 | 2 |
hepatic sinusoid | 2.48e-08 | 2 |
abdomen blood vessel | 2.48e-08 | 2 |
sinusoid | 2.48e-08 | 2 |
abdominal segment blood vessel | 2.48e-08 | 2 |
midface | 3.08e-08 | 2 |
exocrine gland | 1.73e-07 | 31 |
exocrine system | 1.73e-07 | 31 |
foregut | 1.76e-07 | 87 |
duct | 2.54e-07 | 19 |
subdivision of digestive tract | 6.40e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.47e-16 | 14 |
bronchus cancer | 3.04e-09 | 7 |
bronchogenic carcinoma | 3.04e-09 | 7 |
lung adenocarcinoma | 1.61e-08 | 2 |
lung carcinoma | 2.22e-07 | 9 |