FFCP PHASE1:Hg19::chr17:6544372..6544386,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84817 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28218 | |||
|TSSclassifier=weak | |||
|UniProt=Q9BRA2 | |||
|association_with_transcript=150bp_to_NM_032731,uc002gdf.3_5end | |||
|coexpression_cluster_id=C3668 | |||
|description=CAGE_peak_1_at_TXNDC17_5end | |||
|id=chr17:6544372..6544386,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.20e-37!679;CL:0000004!1.20e-37!679;CL:0000255!1.20e-37!679;CL:0000012!1.79e-36!682;CL:0000066!4.49e-33!254;CL:0002321!1.07e-27!248;CL:0000220!1.32e-27!246;CL:0000003!3.39e-26!722;CL:0000144!1.22e-20!625;CL:0000063!3.96e-18!578;CL:0002371!5.17e-18!591;CL:0000222!7.81e-14!119;CL:0000223!3.68e-11!59;CL:0000076!2.67e-10!62;CL:0000055!7.95e-10!180;CL:0002076!1.19e-09!43;CL:0002368!3.84e-08!13;CL:0000680!5.45e-08!57;CL:0000056!5.45e-08!57;CL:0000355!5.45e-08!57;CL:0000393!5.74e-08!60;CL:0000211!5.74e-08!60;CL:0000183!2.03e-07!59;CL:0000187!2.11e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002368;3.89e-08;13!CL:0002076;2.46e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.65e-33,253;CL:0002321,6.09e-28,250;CL:0000222,5.34e-14,121;CL:0000223,8.07e-11,58;CL:0000076,1.25e-10,63;CL:0002076,2.64e-09,42;CL:0002368,3.84e-08,13;CL:0000680,9.25e-08,58;CL:0000056,9.25e-08,58;CL:0000355,9.25e-08,58;CL:0000393,9.55e-08,61;CL:0000211,9.55e-08,61;CL:0000187,3.52e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!4.66e-12!239;DOID:162!2.08e-11!235;DOID:305!3.27e-08!106;DOID:0050687!4.93e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,4.66e-12,239;DOID:162,2.08e-11,235;DOID:305,3.27e-08,106;DOID:0050687,4.93e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0003104!2.56e-13!238;UBERON:0009142!2.56e-13!238;UBERON:0000490!1.16e-11!138;UBERON:0002100!1.80e-11!216;UBERON:0005256!7.24e-11!143;UBERON:0003914!1.75e-10!118;UBERON:0000486!1.07e-08!82;UBERON:0000914!5.56e-07!83;UBERON:0002329!5.56e-07!83;UBERON:0003077!5.56e-07!83;UBERON:0003059!5.56e-07!83;UBERON:0007282!5.56e-07!83;UBERON:0009618!5.56e-07!83;UBERON:0007285!5.56e-07!83;UBERON:0002049!5.82e-07!79;UBERON:0007798!5.82e-07!79;UBERON:0004119!6.18e-07!169;UBERON:0000925!6.18e-07!169;UBERON:0006595!6.18e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,3.18e-12,148;UBERON:0002100,1.02e-11,199;UBERON:0003914,1.17e-10,117;UBERON:0005256,2.06e-09,122;UBERON:0000486,1.67e-08,83;UBERON:0003104,3.61e-08,160;UBERON:0009142,3.61e-08,160;UBERON:0007503,4.79e-08,78;UBERON:0004119,4.92e-07,160;UBERON:0000925,4.92e-07,160;UBERON:0006595,4.92e-07,160;UBERON:0002049,6.86e-07,78;UBERON:0007798,6.86e-07,78 | |||
|phase1_expression=44.8745596798275,48.3867183993622,48.4883150090141,87.0637695672235,60.3397477476839,110.786992560747,58.2589719787114,97.284860507732,15.6711376919903,150.389169138923,100.48336818803,54.6103430325431,56.1823663626606,38.4913357705745,46.7270299776361,130.431078411644,116.922738436652,99.3221722926828,100.514156550844,53.1882970891724,64.6682191244282,41.0625685136295,30.6272506230231,69.3953335119523,48.7105441627835,48.522512649949,55.4178978787134,66.6680317726863,30.6824135942145,23.0297638858328,8.51488678238418,570.041159176935,126.807691805643,140.506523863379,29.4375362205146,80.7521240528554,23.7816355861226,7.20194031091441,6.41742231904453,6.2933152507597,8.50878802111712,8.74512898251245,10.3030227053675,19.6287622352412,18.5159212407517,27.654582975411,18.1294648786434,12.7462045286766,18.8920886246013,16.9738511470069,10.246428261164,21.5198829198613,11.721353145045,9.03678557017357,12.1883837934908,14.306417805238,15.5556505532972,35.9557575112135,20.2015368964796,17.009238435033,19.1801137739712,23.0895910130701,8.17800996248691,17.4752147718405,14.2202526928006,6.80862269629368,6.22822248995575,11.3061899365534,7.82224377630302,18.0266741105247,13.3187890579341,8.83866326370155,14.5572698222807,31.6882929467913,21.8982428963995,37.948214837016,18.1972382457322,19.0724653908713,18.4834424701642,35.6265929676561,22.079751169099,29.2262646023414,22.879511779972,14.7457425040775,33.8013516468151,26.4572737991234,18.0178194166206,26.4386122379062,25.7807500386096,27.6675588815256,12.5226853204079,9.39579502993502,8.41001101875504,11.8954195721123,10.0891541336676,22.3876472058815,10.8190373562608,16.1134412727158,24.2609768819421,45.6419132416551,24.1182477308857,17.9910166179199,21.4309401248702,50.4689369689836,30.3444084699082,31.4578130308742,33.5796791068619,63.1490206247579,62.1683681336218,49.1669334764992,58.5862037705999,37.3845980598218,17.0529547636369,9.63146981122967,18.8163942848958,57.2212180622709,34.8730649177748,27.1465681931278,29.6033039662818,17.2025323735012,23.4390043388311,22.810849066761,20.4782161945771,21.117790840479,24.9861453104692,19.6525119196534,26.2760959014735,20.1606743224732,17.918493117495,15.4962112154595,58.5136479153508,104.629334113767,97.175547001083,61.0832167529917,49.1311152423172,39.2534066383832,33.4020097761462,41.8505988460267,49.0635701081512,85.3658180230871,68.5111328406383,17.8131542676889,201.455294425776,249.167145551137,65.2340261245914,63.0349649023347,80.5725240744323,5.24679373471752,8.57992366170192,4.82894751728434,45.9141161017089,85.1632249155063,84.3551418906454,102.88604543017,119.976838756033,59.7006151009946,54.9656761991812,51.1665183155271,39.8458214209115,40.8359147572898,53.1734698584074,95.7942853205326,31.728067481262,108.460608702031,89.1156142669936,59.2057198523449,88.2400434420847,80.4045970650921,99.6558143528241,52.2096112762471,83.9063987201265,9.22462922052443,15.511210565933,419.522478161118,67.091213478868,69.1402593688606,33.1022952033047,34.4203944898576,60.2936249737207,84.1016400213461,86.466686541061,64.3802301368788,22.7184055841829,72.6090522455619,92.3559752591042,40.1097183259068,31.1134999219199,48.9731792532635,127.361311346771,63.8928440129783,76.9660704841775,68.2294437120274,75.7565379642856,77.9501977197479,40.4225259084689,64.4880165886782,27.4846577927536,23.7600571456411,42.0353779773547,77.3637157647322,63.9570146216452,59.0859759978772,47.7952745910903,32.6935656271336,50.0434487804155,60.0716079766079,35.9068960786766,117.062013021142,33.1870826024395,48.4775272618148,96.4290150276006,51.0154863343484,77.9077121042598,33.4932702059318,55.6489400431454,23.7974628460185,65.5751044734867,61.5938409155639,53.8491907057451,32.0059192501248,42.6011511019937,71.5339897416246,79.5239177936187,578.816255224074,386.208506756622,441.965881494455,41.3490863779328,71.831134430245,64.1390564639742,46.3364915918706,69.8928756925491,144.896011553105,53.1928409921374,32.8052878478371,37.2964287651697,61.2965665002212,110.447560695447,155.336828452315,189.489191647786,169.430754008088,159.705672516506,166.459895286598,179.376588047989,188.62900011607,189.74615677621,220.075373773335,188.96779638391,134.632102851308,51.446751416425,79.3847041481927,105.20667890212,113.025129917927,69.1224190817243,23.3975442689765,38.6183697025377,108.773991729265,249.791649590032,138.254156506872,330.237674372207,146.660097131111,35.5131052788254,189.268130920883,140.001401764515,35.2428431124234,57.0606253986093,61.0670074029342,82.8744067512133,69.0622572611592,45.831855081638,41.2073357805539,22.4057475539532,51.7149425957715,43.2516682260199,817.359032364695,516.713026339692,925.791384992784,235.628473231194,319.697332365358,183.256920640971,21.1845192295256,39.7978921739782,10.3664057770386,8.79131715843465,7.44830357215642,35.4953229093225,12.6056180434232,10.5495702489042,25.6608669034058,52.5448487713983,91.6046326423948,27.4393375325355,56.8504597630979,61.4703697054925,70.478092673933,77.175214307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| |||
|short_description=p1@TXNDC17 | |||
}} |
Revision as of 13:22, 20 January 2014
Short description: | p1@TXNDC17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TXNDC17_5end |
Coexpression cluster: | C3668_Mallassezderived_Prostate_Urothelial_Bronchial_Gingival_Small_Esophageal |
Association with transcript: | 150bp_to_NM_032731, uc002gdf.3_5end |
EntrezGene: | TXNDC17 |
HGNC: | 28218 |
UniProt: | Q9BRA2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.65e-33 | 253 |
embryonic cell | 6.09e-28 | 250 |
mesodermal cell | 5.34e-14 | 121 |
endodermal cell | 8.07e-11 | 58 |
squamous epithelial cell | 1.25e-10 | 63 |
endo-epithelial cell | 2.64e-09 | 42 |
respiratory epithelial cell | 3.84e-08 | 13 |
muscle precursor cell | 9.25e-08 | 58 |
myoblast | 9.25e-08 | 58 |
multi-potent skeletal muscle stem cell | 9.25e-08 | 58 |
electrically responsive cell | 9.55e-08 | 61 |
electrically active cell | 9.55e-08 | 61 |
muscle cell | 3.52e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 3.18e-12 | 148 |
trunk | 1.02e-11 | 199 |
epithelial tube | 1.17e-10 | 117 |
trunk mesenchyme | 2.06e-09 | 122 |
multilaminar epithelium | 1.67e-08 | 83 |
mesenchyme | 3.61e-08 | 160 |
entire embryonic mesenchyme | 3.61e-08 | 160 |
epithelial vesicle | 4.79e-08 | 78 |
endoderm-derived structure | 4.92e-07 | 160 |
endoderm | 4.92e-07 | 160 |
presumptive endoderm | 4.92e-07 | 160 |
vasculature | 6.86e-07 | 78 |
vascular system | 6.86e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 4.66e-12 | 239 |
cancer | 2.08e-11 | 235 |
carcinoma | 3.27e-08 | 106 |
cell type cancer | 4.93e-07 | 143 |