FFCP PHASE1:Hg19::chr17:4642716..4642727,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58191 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16642 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H2A7 | |||
|association_with_transcript=495bp_to_ENST00000293778,NM_001100812,NM_022059,uc002fyr.3,uc002fys.3_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_7_at_CXCL16_5end | |||
|id=chr17:4642716..4642727,- | |||
|ontology_enrichment_celltype=CL:0000766!1.46e-52!76;CL:0000557!2.23e-45!71;CL:0002057!5.41e-44!42;CL:0000839!1.66e-42!70;CL:0002009!3.57e-42!65;CL:0002194!2.73e-40!63;CL:0000576!2.73e-40!63;CL:0000040!2.73e-40!63;CL:0000559!2.73e-40!63;CL:0000860!9.31e-40!45;CL:0000763!1.89e-33!112;CL:0000049!1.89e-33!112;CL:0000738!2.72e-27!140;CL:0002031!1.25e-18!124;CL:0000037!4.43e-17!172;CL:0000566!4.43e-17!172;CL:0002087!1.30e-16!119;CL:0002032!1.44e-16!165;CL:0000837!1.44e-16!165;CL:0000988!7.29e-16!182;CL:0002393!1.41e-09!9;CL:0002397!1.41e-09!9;CL:0000094!3.16e-09!8;CL:0000990!9.74e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.10e-77;33!CL:0002057;7.10e-77;33!CL:0000473;3.35e-72;39!CL:0000234;3.35e-72;39!CL:0000576;1.33e-67;48!CL:0000766;6.12e-54;69!CL:0000763;2.68e-24;100!CL:0000094;2.67e-21;8!CL:0000738;1.90e-18;136!CL:0002087;1.00e-16;104!CL:0002393;2.88e-15;6!CL:0002397;2.88e-15;6!CL:0000081;4.38e-15;11!CL:0000453;3.58e-13;5!CL:0000235;5.33e-11;6!CL:0000988;3.21e-09;177!CL:0000767;6.84e-09;3!CL:0002619;8.50e-09;3!CL:0000775;1.00e-08;3!CL:0000219;1.34e-08;193!CL:0000875;2.82e-08;3!CL:0002396;2.82e-08;3!CL:0000990;3.61e-07;8!CL:0000771;4.42e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.31e-123,72;CL:0000473,7.17e-116,48;CL:0000234,7.17e-116,48;CL:0002009,4.72e-108,61;CL:0000860,3.06e-106,42;CL:0002057,3.06e-106,42;CL:0000557,2.48e-105,67;CL:0002194,4.04e-103,59;CL:0000576,4.04e-103,59;CL:0000040,4.04e-103,59;CL:0000559,4.04e-103,59;CL:0000839,9.23e-99,66;CL:0000763,9.92e-93,108;CL:0000049,9.92e-93,108;CL:0000738,1.30e-75,136;CL:0000037,2.14e-58,168;CL:0002032,1.95e-57,161;CL:0000837,1.95e-57,161;CL:0000988,1.14e-54,177;CL:0002031,3.86e-53,120;CL:0002087,2.80e-51,115;CL:0000134,1.45e-22,354;CL:0002393,4.33e-22,9;CL:0002397,4.33e-22,9;CL:0002320,7.95e-22,361;CL:0000094,3.43e-21,8;CL:0000219,3.22e-19,386;CL:0000048,4.97e-16,427;CL:0000723,1.37e-15,433;CL:0000034,5.07e-15,441;CL:0000081,5.22e-15,11;CL:0000453,3.22e-13,5;CL:0000235,6.50e-11,6;CL:0002619,7.53e-09,3;CL:0000767,8.63e-09,3;CL:0000775,1.02e-08,3;CL:0000875,1.73e-08,3;CL:0002396,1.73e-08,3;CL:0000990,3.42e-07,8;CL:0000771,4.42e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.09e-75;42!CL:0000049;6.78e-26;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.60e-39!80;UBERON:0002390!1.23e-35!102;UBERON:0003061!1.23e-35!102;UBERON:0001474!1.28e-35!86;UBERON:0002193!2.64e-34!112;UBERON:0002405!3.30e-32!115;UBERON:0004765!4.96e-31!101;UBERON:0001434!4.96e-31!101;UBERON:0002204!6.07e-15!167;UBERON:0003081!8.97e-13!216;UBERON:0007023!6.20e-10!115;UBERON:0000062!2.09e-09!511;UBERON:0000467!4.55e-07!625;UBERON:0000480!5.52e-07!626 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.25e-95,76;UBERON:0001474,4.66e-87,82;UBERON:0002390,2.67e-79,98;UBERON:0003061,2.67e-79,98;UBERON:0004765,3.55e-78,90;UBERON:0002405,3.10e-75,93;UBERON:0002193,1.04e-70,108;UBERON:0001434,4.72e-69,100;UBERON:0002204,5.75e-36,167;UBERON:0003081,4.10e-31,203;UBERON:0002384,1.07e-22,371;UBERON:0000926,4.21e-15,315;UBERON:0004120,4.21e-15,315;UBERON:0006603,4.21e-15,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14691421479123,3.0706351847777,4.4896675761662,0,0,0.739508020333575,0,0,0,1.66198622559563,2.80762226458198,4.55722828503289,3.35873211359887,3.2389366601898,3.34848237924443,11.4864608635856,13.9814099164859,4.85168122375632,16.2700325833979,16.446715520873,10.5300166104335,21.001544639517,10.7587496742222,9.22280696565482,21.3742322056703,12.2642089880927,10.8341189275473,20.8948996892291,14.4640259530658,6.74170453335254,25.4049630667849,24.3906060577831,15.983428144976,12.2044981069085,11.7683557996763,11.08184351385,23.2167390902867,18.7237124148076,10.5879782329248,12.3111845975804,13.5585558789252,8.47036494349955,19.3727840842678,14.7311054395026,7.59509729858123,3.38008458099107,2.33864729961548,1.04829322754188,1.23561494261145,1.50176892841506,0.964353520182481,3.70516566863623,1.59133341759272,1.82664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,0.361439152384566,0,1.01392563272577,0,0,0,0,0,0.589405839739707,0,0,0.324547393654683,0.522389211897802,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44905874525234,0,0,0,0,18.4492584410489,11.6334079244498,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0.718618141816238,0,0,0,0,0,0.901428353439581,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0.286804595389004,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,1.96565443335525,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0.858486162094873,1.23108503043699,2.57404691653161,3.26988557035202,0,0.671928512795438,0.141775097242386,0,0,0,0.985326475791887,1.84901711427775,1.4512968087854,0.864719720501769,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,3.01354254859276,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,2.24702107184155,2.99161459204025,7.0450637284126,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.620304078368662,1.2942852049117,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.184161977871793,0,0,0,1.35359883872224,0.308061348417659,0,0,0.105551628892876,0,0.170093705276516,0,0,0.270946437543853,0,0.254876273045038,0,0.447749509444357,0,0,0,0.328014645699706,0,0.206082023295445,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0.192190067365106,0,0.30347334256665,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0.238231775457789,1.23408681925858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,1.02555725490326,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.20453736500431,0,0,0.179736702294654,0,0,0,0,1.11136990144637,0,1.02044907978036,0,0,0,0,0.227586896570999,0,0,0,0,0.347249989866585,0,0.241192877250816,0,0,0.295547618953547,0.658156191461918,0,0.139423744278603,0.0769502585037971,0,0,0,0.434589487688032,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.176915129006678,0,0,0,0,0.67401132980677,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.568679216656392,0.150323419414493,0,0,0,0,0,0,0,0,0,0.261177619741208,0.17472666824203,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0.640358984218058,0,0.144090417154106,0,0,0,0,0.235694034616795,0,0.104602846312333,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0,0,0.399358000997982,0.858452096273142,0,0.0671834724867263,0,0,0,0.164831716762333,0,0,0,0,0.408610218334727,0,0,0,2.92466059016951,3.0952078182318,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0.258565912723101,0.26446520348538,0.342173675768659,0,0.747511887973863,0,1.65695622138878,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0.683060432355218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0.260994291965212,0,0.231522474323834,0,0,0,0,0,0,0.337884881306145,0,0,0,0.138258436151731,1.55888247071511,3.32162100783408,3.27130788511688,0,0.245772908753719,0,0,0,0,0,0,0,0.622077260032973,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0.3062454773532,0.449604575675217,0,0,0,0,0.0691572524642179,0,0,0,0,0.366857197043358,0.231051332300676,0,0,0,0,0.40341013740704,0,0,0.163771917510097,0.295712172434091,0,0,0.413373593002368,0.19024743058172,0,0,0,0,0.638812138197976,0,0.336283722218824,0.606965604236632,0.455324382702595,0.266107110487916,0,0,0.135939465953663,0.0657727735628491,0,0.222462803784138,0.078493092850514,0.157115589916002,0.840816489941367,0,0,0,0.285906176706625,0,0,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,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| |||
|short_description=p7@CXCL16 | |||
}} |
Revision as of 13:13, 20 January 2014
Short description: | p7@CXCL16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CXCL16_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 495bp_to_ENST00000293778, NM_001100812, NM_022059, uc002fyr.3, uc002fys.3_5end |
EntrezGene: | CXCL16 |
HGNC: | 16642 |
UniProt: | Q9H2A7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.25e-95 | 76 |
bone element | 4.66e-87 | 82 |
hematopoietic system | 2.67e-79 | 98 |
blood island | 2.67e-79 | 98 |
skeletal element | 3.55e-78 | 90 |
immune system | 3.10e-75 | 93 |
hemolymphoid system | 1.04e-70 | 108 |
skeletal system | 4.72e-69 | 100 |
musculoskeletal system | 5.75e-36 | 167 |
lateral plate mesoderm | 4.10e-31 | 203 |
connective tissue | 1.07e-22 | 371 |
mesoderm | 4.21e-15 | 315 |
mesoderm-derived structure | 4.21e-15 | 315 |
presumptive mesoderm | 4.21e-15 | 315 |