FFCP PHASE1:Hg19::chr17:995135..995149,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=81 | |||
|TSSclassifier=strong | |||
|UniProt=Q6ZT60 | |||
|association_with_transcript=-35bp_to_uc002fsh.1_5end | |||
|coexpression_cluster_id=C2451 | |||
|description=CAGE_peak_25_at_ABR_5end | |||
|id=chr17:995135..995149,- | |||
|ontology_enrichment_celltype=CL:0002623!1.45e-16!3;CL:0000622!4.01e-10!5;CL:0002076!1.32e-09!43;CL:0000154!1.67e-08!6;CL:0000068!2.42e-07!3;CL:0000069!2.42e-07!3;CL:0000307!2.42e-07!3;CL:0000377!2.42e-07!3;CL:0002231!3.68e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002623;9.55e-47;3!CL:0000622;2.20e-28;5!CL:0000154;8.79e-24;6!CL:0000150;4.31e-16;9!CL:0002251;1.47e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.21e-46,3;CL:0000622,2.53e-28,5;CL:0000154,9.87e-24,6;CL:0000150,4.66e-16,9;CL:0002251,1.52e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0009143;6.47e-17;1!UBERON:0004874;2.08e-16;1!UBERON:0008814;4.70e-09;2!UBERON:0010056;4.70e-09;2!UBERON:0007297;7.21e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001044!2.77e-21!6;UBERON:0003293!2.77e-21!6;UBERON:0003294!2.77e-21!6;UBERON:0010047!2.77e-21!6;UBERON:0000167!2.77e-21!6;UBERON:0000161!3.53e-18!35;UBERON:0000078!4.03e-17!18;UBERON:0006947!9.47e-16!3;UBERON:0004054!9.47e-16!3;UBERON:0000166!1.73e-14!21;UBERON:0007023!9.30e-13!115;UBERON:0003408!1.13e-12!10;UBERON:0005904!6.13e-12!4;UBERON:0001004!1.44e-10!72;UBERON:0000165!1.53e-10!28;UBERON:0000930!1.53e-10!28;UBERON:0003101!3.78e-10!22;UBERON:0000079!3.78e-10!22;UBERON:0000077!1.54e-09!130;UBERON:0004921!1.54e-09!129;UBERON:0004185!1.54e-09!129;UBERON:0001444!1.18e-08!48;UBERON:0001041!2.71e-08!98;UBERON:0004119!3.90e-08!169;UBERON:0000925!3.90e-08!169;UBERON:0006595!3.90e-08!169;UBERON:0002530!4.80e-08!59;UBERON:0001723!7.90e-08!3;UBERON:0001033!7.90e-08!3;UBERON:0010056!7.90e-08!3;UBERON:0000464!1.45e-07!104;UBERON:0003135!1.50e-07!11;UBERON:0003102!2.62e-07!95;UBERON:0001007!2.84e-07!155;UBERON:0001555!2.84e-07!155;UBERON:0007026!2.84e-07!155;UBERON:0002365!4.45e-07!31;UBERON:0002330!4.45e-07!31;UBERON:0003126!6.59e-07!7;UBERON:0001005!6.59e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;8.79e-24;6!UBERON:0003293;8.79e-24;6!UBERON:0003294;8.79e-24;6!UBERON:0010047;8.79e-24;6!UBERON:0003408;8.79e-24;6!UBERON:0000167;8.79e-24;6!UBERON:0001041;5.27e-18;14!UBERON:0002372;7.57e-17;1!UBERON:0001961;7.57e-17;1!UBERON:0001744;7.57e-17;1!UBERON:0001042;7.57e-17;1!UBERON:0001735;7.57e-17;1!UBERON:0000989;2.08e-16;1!UBERON:0001301;2.08e-16;1!UBERON:0008811;2.08e-16;1!UBERON:0000165;7.77e-14;28!UBERON:0000161;2.41e-13;19!UBERON:0000166;2.41e-13;19!UBERON:0000002;5.09e-11;6!UBERON:0001560;5.09e-11;6!UBERON:0004921;4.46e-10;33!UBERON:0006562;4.34e-09;2!UBERON:0003127;5.28e-09;2!UBERON:0000341;5.28e-09;2!UBERON:0002365;3.64e-08;31!UBERON:0002330;3.64e-08;31!UBERON:0004175;4.65e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,9.87e-24,6;UBERON:0003293,9.87e-24,6;UBERON:0003294,9.87e-24,6;UBERON:0010047,9.87e-24,6;UBERON:0000167,9.87e-24,6;UBERON:0000166,1.44e-17,22;UBERON:0002372,7.57e-17,1;UBERON:0001961,7.57e-17,1;UBERON:0001744,7.57e-17,1;UBERON:0001735,7.57e-17,1;UBERON:0000989,1.41e-16,1;UBERON:0008811,1.41e-16,1;UBERON:0006258,1.41e-16,1;UBERON:0005876,1.41e-16,1;UBERON:0004874,1.41e-16,1;UBERON:0001301,1.93e-16,1;UBERON:0003408,1.61e-14,10;UBERON:0000165,2.42e-13,29;UBERON:0000930,2.42e-13,29;UBERON:0000002,5.36e-11,6;UBERON:0001560,5.36e-11,6;UBERON:0000161,9.41e-11,36;UBERON:0003127,5.08e-09,2;UBERON:0000341,5.49e-09,2;UBERON:0000153,1.01e-08,62;UBERON:0007811,1.01e-08,62;UBERON:0001041,3.05e-08,87;UBERON:0002365,3.27e-08,31;UBERON:0002330,3.27e-08,31;UBERON:0007023,6.18e-08,114;UBERON:0001444,6.82e-08,49;UBERON:0001004,2.91e-07,74;UBERON:0001042,4.01e-07,10;UBERON:0009145,4.01e-07,10;UBERON:0000033,6.73e-07,56 | |||
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|short_description=p25@ABR | |||
}} |
Revision as of 12:56, 20 January 2014
Short description: | p25@ABR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_ABR_5end |
Coexpression cluster: | C2451_salivary_esophagus_tonsil_tongue_trachea_throat_cervix |
Association with transcript: | -35bp_to_uc002fsh.1_5end |
EntrezGene: | ABR |
HGNC: | 81 |
UniProt: | Q6ZT60 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.21e-46 | 3 |
acinar cell | 2.53e-28 | 5 |
protein secreting cell | 9.87e-24 | 6 |
glandular epithelial cell | 4.66e-16 | 9 |
epithelial cell of alimentary canal | 1.52e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 9.87e-24 | 6 |
gland of oral region | 9.87e-24 | 6 |
gland of foregut | 9.87e-24 | 6 |
oral gland | 9.87e-24 | 6 |
oral cavity | 9.87e-24 | 6 |
oral opening | 1.44e-17 | 22 |
tonsil | 7.57e-17 | 1 |
mucosa-associated lymphoid tissue | 7.57e-17 | 1 |
lymphoid tissue | 7.57e-17 | 1 |
tonsillar ring | 7.57e-17 | 1 |
penis | 1.41e-16 | 1 |
intromittent organ | 1.41e-16 | 1 |
lateral plate mesenchyme | 1.41e-16 | 1 |
undifferentiated genital tubercle | 1.41e-16 | 1 |
somatopleure | 1.41e-16 | 1 |
epididymis | 1.93e-16 | 1 |
gland of gut | 1.61e-14 | 10 |
mouth | 2.42e-13 | 29 |
stomodeum | 2.42e-13 | 29 |
uterine cervix | 5.36e-11 | 6 |
neck of organ | 5.36e-11 | 6 |
orifice | 9.41e-11 | 36 |
open tracheal system trachea | 5.08e-09 | 2 |
throat | 5.49e-09 | 2 |
anterior region of body | 1.01e-08 | 62 |
craniocervical region | 1.01e-08 | 62 |
foregut | 3.05e-08 | 87 |
exocrine gland | 3.27e-08 | 31 |
exocrine system | 3.27e-08 | 31 |
adult organism | 6.18e-08 | 114 |
subdivision of head | 6.82e-08 | 49 |
respiratory system | 2.91e-07 | 74 |
chordate pharynx | 4.01e-07 | 10 |
pharyngeal region of foregut | 4.01e-07 | 10 |
head | 6.73e-07 | 56 |