FFCP PHASE1:Hg19::chr16:86965053..86965066,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:86965053..86965066,- | |||
|id=chr16:86965053..86965066,- | |||
|ontology_enrichment_celltype=CL:0000222!1.19e-26!119;CL:0002139!3.03e-20!24;CL:0000213!1.16e-19!57;CL:0000215!1.16e-19!57;CL:0000115!2.52e-15!35;CL:0000220!7.19e-15!246;CL:0002321!1.33e-14!248;CL:0000071!3.12e-14!18;CL:0002546!3.12e-14!18;CL:0002078!2.58e-12!44;CL:0000076!9.38e-12!62;CL:0000359!7.12e-11!32;CL:0000183!4.23e-09!59;CL:0000680!8.22e-09!57;CL:0000056!8.22e-09!57;CL:0000355!8.22e-09!57;CL:0002594!1.28e-08!4;CL:0000187!1.53e-08!54;CL:0000192!3.53e-08!42;CL:0000514!3.53e-08!42;CL:0000066!5.02e-08!254;CL:0005020!1.05e-07!6;CL:0002138!1.05e-07!6;CL:0005022!1.05e-07!6;CL:0000144!1.28e-07!625;CL:0000077!2.90e-07!19;CL:0002543!3.77e-07!6;CL:0000393!3.78e-07!60;CL:0000211!3.78e-07!60;CL:1000413!5.13e-07!9;CL:0000012!6.88e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0002594;1.04e-33;4!CL:0002139;5.10e-21;24!CL:0000359;4.50e-14;32!CL:0002543;4.96e-13;6!CL:0002138;4.96e-13;6!CL:0000115;6.01e-13;36!CL:0000071;2.15e-11;18!CL:1001319;1.20e-09;1!CL:1000600;1.20e-09;1!CL:0000213;2.50e-09;58!CL:0000215;2.50e-09;58!CL:0002078;5.75e-08;45!CL:0000192;6.92e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002594,7.52e-34,4;CL:0002139,3.41e-21,24;CL:0000222,3.90e-19,121;CL:0000359,2.15e-15,32;CL:0000115,8.56e-14,36;CL:0002543,3.36e-13,6;CL:0005020,6.51e-13,6;CL:0002138,6.51e-13,6;CL:0005022,6.51e-13,6;CL:0000213,6.80e-13,58;CL:0000215,6.80e-13,58;CL:0000071,1.33e-11,18;CL:0002546,1.33e-11,18;CL:0000192,3.38e-11,43;CL:0000514,3.38e-11,43;CL:0002078,7.90e-11,45;CL:0002321,8.09e-10,250;CL:1001319,1.25e-09,1;CL:1000600,1.25e-09,1;CL:0000187,1.57e-08,55;CL:0000680,4.90e-08,58;CL:0000056,4.90e-08,58;CL:0000355,4.90e-08,58;CL:0000393,1.37e-07,61;CL:0000211,1.37e-07,61 | |||
|ontology_enrichment_development_v019=CL:0005022;4.96e-13;6!CL:0002546;2.15e-11;18!CL:0000514;6.92e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.25e-25!69;UBERON:0002049!9.63e-25!79;UBERON:0007798!9.63e-25!79;UBERON:0004872!2.82e-22!84;UBERON:0001981!5.91e-22!60;UBERON:0007500!5.91e-22!60;UBERON:0004537!5.91e-22!60;UBERON:0006965!5.91e-22!60;UBERON:0004535!1.54e-20!110;UBERON:0001637!1.68e-20!42;UBERON:0003509!1.68e-20!42;UBERON:0004572!1.68e-20!42;UBERON:0001009!1.26e-19!113;UBERON:0003914!6.63e-16!118;UBERON:0001986!3.12e-14!18;UBERON:0004638!3.12e-14!18;UBERON:0004852!3.12e-14!18;UBERON:0004573!6.41e-13!33;UBERON:0004571!6.41e-13!33;UBERON:0000487!5.55e-11!22;UBERON:0000490!1.62e-09!138;UBERON:0006914!3.03e-09!25;UBERON:0004111!7.17e-09!241;UBERON:0001310!1.28e-08!4;UBERON:0001134!7.40e-08!61;UBERON:0002036!7.40e-08!61;UBERON:0003082!7.40e-08!61;UBERON:0000486!7.46e-08!82;UBERON:0000914!9.08e-08!83;UBERON:0002329!9.08e-08!83;UBERON:0003077!9.08e-08!83;UBERON:0003059!9.08e-08!83;UBERON:0007282!9.08e-08!83;UBERON:0009618!9.08e-08!83;UBERON:0007285!9.08e-08!83;UBERON:0000477!1.04e-07!286;UBERON:0004290!1.38e-07!70;UBERON:0002385!1.98e-07!63;UBERON:0001015!1.98e-07!63;UBERON:0000383!1.98e-07!63;UBERON:0003915!5.13e-07!9;UBERON:0004700!5.13e-07!9;UBERON:0001917!5.13e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001310;1.04e-33;4!UBERON:0000055;4.65e-19;65!UBERON:0010260;3.82e-15;9!UBERON:0007500;9.05e-14;56!UBERON:0001981;9.05e-14;56!UBERON:0004537;9.05e-14;56!UBERON:0001637;1.17e-13;42!UBERON:0003509;1.17e-13;42!UBERON:0004572;1.17e-13;42!UBERON:0002049;3.13e-12;75!UBERON:0007798;3.13e-12;75!UBERON:0004638;2.15e-11;18!UBERON:0001986;2.15e-11;18!UBERON:0004852;2.15e-11;18!UBERON:0001473;6.60e-10;8!UBERON:0004536;6.60e-10;8!UBERON:0006558;6.60e-10;8!UBERON:0004645;1.20e-09;1!UBERON:0001256;1.20e-09;1!UBERON:0001259;1.20e-09;1!UBERON:0000487;2.71e-09;22!UBERON:0001638;7.33e-09;9!UBERON:0003920;7.33e-09;9!UBERON:0004582;7.33e-09;9!UBERON:0003914;1.16e-08;74!UBERON:0000490;1.85e-08;33!UBERON:0006914;3.70e-08;25!UBERON:0002465;5.05e-08;10!UBERON:0000025;7.20e-08;93!UBERON:0004535;1.14e-07;109 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001310,7.52e-34,4;UBERON:0000055,2.80e-28,68;UBERON:0002049,2.65e-24,78;UBERON:0007798,2.65e-24,78;UBERON:0007500,1.84e-21,59;UBERON:0001981,1.84e-21,59;UBERON:0004537,1.84e-21,59;UBERON:0006965,1.84e-21,59;UBERON:0004535,5.15e-19,109;UBERON:0001009,1.99e-18,112;UBERON:0001637,4.25e-18,42;UBERON:0003509,4.25e-18,42;UBERON:0004572,4.25e-18,42;UBERON:0004872,3.62e-17,83;UBERON:0010260,3.32e-15,9;UBERON:0004638,1.33e-11,18;UBERON:0001986,1.33e-11,18;UBERON:0004852,1.33e-11,18;UBERON:0003914,1.81e-11,117;UBERON:0001473,8.07e-10,8;UBERON:0004536,8.07e-10,8;UBERON:0006558,8.07e-10,8;UBERON:0004645,1.25e-09,1;UBERON:0001256,1.25e-09,1;UBERON:0001259,1.25e-09,1;UBERON:0000487,1.84e-09,22;UBERON:0001638,5.67e-09,9;UBERON:0003920,5.67e-09,9;UBERON:0004582,5.67e-09,9;UBERON:0000490,1.56e-08,148;UBERON:0006914,2.65e-08,25;UBERON:0004111,5.15e-08,240;UBERON:0002465,5.92e-08,10;UBERON:0001134,1.88e-07,62;UBERON:0002036,1.88e-07,62;UBERON:0003082,1.88e-07,62;UBERON:0002385,3.47e-07,64;UBERON:0001015,3.47e-07,64;UBERON:0000383,3.47e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0,0,0,0,0,0,0,0,0,1.39133685156694,0.860234595106124,0,0.56530794192401,0,0.550236083880135,1.67195973229448,0,0.35576626268671,0.33472061276467,0.805658634218294,0.760272105718513,0,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,1.53316637465883,1.89853131913626,1.09921046358244,0,0,0,0.993943903390637,0.25326102332916,0.264818361626438,0,0,0,0,2.96001058100592,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0.149448680551801,0,0,0.280901613404497,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.567160915800105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0,0.117408694235822,1.15493158208859,1.38895653772983,1.14152491340759,0,0,0,0,0,0.93733833986777,1.17587489739202,0.850650583454319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50719688529793,4.35766729300147,0.399891964728228,0,0,0,0,0,0,0.723906533337896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.164254312027618,0.519254429183621,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0.656029291399411,0.325378394664303,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0.255225424989168,0,0.464845549297286,0.94443704049192,0.6970372701606,0,1.06461206063404,0,0.18532421910392,1.14499909393593,0,0,0,0,0,0.318203247925937,0.78494864019923,0,0,0,1.01091240786658,0,0.421258456238981,0,0,0,0,0.141405431953713,0,1.10273068709225,0,0.876901770507525,0,0,1.21746226177622,1.239293992399,1.40847801266121,0,0,2.1400263088875,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.81681780955361,0,0,0,0,0,0,0,0,0,0.261177619741208,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0.400794101257669,0,0,0,0,0,0,0,0,1.22313785466253,0.836822770498666,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,0,0,0,0,0.228840068396924,0.151230923763239,0.310874401165561,0,0.159296767163702,0,0,0.414706207840855,0,0.521745061811734,0.300515217994437,0,0,0.181848659202559,0.107410557042488,0,0.398095888698616,0.400027764663154,0,0.336749488765919,0,0,0,0,0.906823702049089,0.231522474323834,0,0.895444205407437,0,0.219284049578707,0,0.192914038270915,0.675769762612291,0,0.345430341731199,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.346576998451015,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22104902916462,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:86965053..86965066,- | |||
}} |
Revision as of 12:40, 20 January 2014
Short description: | p@chr16:86965053..86965066, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:86965053..86965066, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical artery | 7.52e-34 | 4 |
endothelial cell of vascular tree | 3.41e-21 | 24 |
mesodermal cell | 3.90e-19 | 121 |
vascular associated smooth muscle cell | 2.15e-15 | 32 |
endothelial cell | 8.56e-14 | 36 |
vein endothelial cell | 3.36e-13 | 6 |
lymphangioblast | 6.51e-13 | 6 |
endothelial cell of lymphatic vessel | 6.51e-13 | 6 |
vascular lymphangioblast | 6.51e-13 | 6 |
lining cell | 6.80e-13 | 58 |
barrier cell | 6.80e-13 | 58 |
blood vessel endothelial cell | 1.33e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.33e-11 | 18 |
smooth muscle cell | 3.38e-11 | 43 |
smooth muscle myoblast | 3.38e-11 | 43 |
meso-epithelial cell | 7.90e-11 | 45 |
embryonic cell | 8.09e-10 | 250 |
bladder cell | 1.25e-09 | 1 |
lower urinary tract cell | 1.25e-09 | 1 |
muscle cell | 1.57e-08 | 55 |
muscle precursor cell | 4.90e-08 | 58 |
myoblast | 4.90e-08 | 58 |
multi-potent skeletal muscle stem cell | 4.90e-08 | 58 |
electrically responsive cell | 1.37e-07 | 61 |
electrically active cell | 1.37e-07 | 61 |