FFCP PHASE1:Hg19::chr16:55867146..55867153,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=100653057,1066 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1863 | |||
|TSSclassifier=strong | |||
|UniProt=P23141,E9PAU8 | |||
|association_with_transcript=-71bp_to_ENST00000360526,ENST00000361503,ENST00000422046,NM_001025194,NM_001025195,NM_001266,uc002eil.2,uc002eim.2,uc002ein.2_5end | |||
|coexpression_cluster_id=C1133 | |||
|description=CAGE_peak_3_at_CES1_5end | |||
|id=chr16:55867146..55867153,- | |||
|ontology_enrichment_celltype=CL:0000181!2.31e-15!12;CL:0000417!2.31e-15!12;CL:0000668!2.31e-15!12;CL:0000414!2.31e-15!12;CL:0000412!2.31e-15!12;CL:0000182!2.31e-15!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.57e-18;12!CL:0000136;1.46e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.62e-18,12;CL:0000136,2.02e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.15e-14;11!UBERON:0009497;2.21e-12;13!UBERON:0000358;5.70e-08;1!UBERON:0006242;5.70e-08;1!UBERON:0003104;6.18e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.26e-07;1!DOID:1357;1.26e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.35e-07,1;DOID:1357,1.35e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.46e-21!115;UBERON:0002107!6.35e-11!19;UBERON:0006925!6.35e-11!19;UBERON:0008836!6.35e-11!19;UBERON:0002368!1.85e-10!35;UBERON:0009854!2.65e-10!23;UBERON:0005057!5.73e-10!26;UBERON:0009497!2.57e-09!25;UBERON:0000015!2.57e-09!25;UBERON:0002423!2.57e-09!25;UBERON:0006235!2.57e-09!25;UBERON:0004161!2.57e-09!25;UBERON:0002530!3.40e-09!59;UBERON:0008835!4.59e-09!22;UBERON:0003894!4.59e-09!22;UBERON:0004921!4.74e-09!129;UBERON:0004185!4.74e-09!129;UBERON:0009856!9.10e-09!26;UBERON:0001007!1.57e-08!155;UBERON:0001555!1.57e-08!155;UBERON:0007026!1.57e-08!155;UBERON:0003929!2.08e-08!54;UBERON:0000949!2.26e-08!45;UBERON:0002365!4.26e-08!31;UBERON:0002330!4.26e-08!31;UBERON:0007499!1.16e-07!25;UBERON:0004119!1.39e-07!169;UBERON:0000925!1.39e-07!169;UBERON:0006595!1.39e-07!169;UBERON:0005911!8.90e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.11e-15;19!UBERON:0006925;1.11e-15;19!UBERON:0002423;2.65e-15;25!UBERON:0002365;1.25e-09;31!UBERON:0002330;1.25e-09;31!UBERON:0000059;1.82e-09;11!UBERON:0002135;3.93e-08;1!UBERON:0006834;5.70e-08;1!UBERON:0002171;1.26e-07;1!UBERON:0001764;1.26e-07;1!UBERON:0001825;1.26e-07;1!UBERON:0006518;1.26e-07;1!UBERON:0008949;1.26e-07;1!UBERON:0000101;1.26e-07;1!UBERON:0002167;1.26e-07;1!UBERON:0002368;1.43e-07;33!UBERON:0001155;6.15e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.12e-15,19;UBERON:0006925,1.12e-15,19;UBERON:0008836,1.12e-15,19;UBERON:0009497,2.90e-15,25;UBERON:0000015,2.90e-15,25;UBERON:0002423,2.90e-15,25;UBERON:0006235,2.90e-15,25;UBERON:0004161,2.90e-15,25;UBERON:0008835,1.99e-13,22;UBERON:0003894,1.99e-13,22;UBERON:0009854,8.27e-13,23;UBERON:0007499,1.02e-11,25;UBERON:0009856,3.09e-11,26;UBERON:0000059,1.48e-09,11;UBERON:0002365,2.73e-09,31;UBERON:0002330,2.73e-09,31;UBERON:0003929,3.22e-08,54;UBERON:0002368,3.92e-08,35;UBERON:0002135,4.07e-08,1;UBERON:0006834,4.35e-08,1;UBERON:0004921,7.44e-08,118;UBERON:0002171,9.72e-08,1;UBERON:0006518,9.72e-08,1;UBERON:0008949,9.72e-08,1;UBERON:0000101,9.72e-08,1;UBERON:0002167,9.72e-08,1;UBERON:0001764,1.35e-07,1;UBERON:0001825,1.35e-07,1;UBERON:0007023,3.48e-07,114;UBERON:0001155,5.67e-07,9;UBERON:0001007,5.94e-07,145;UBERON:0001555,5.94e-07,145;UBERON:0007026,5.94e-07,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0.257575567634187,0,0,0.242584061187816,0,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0,0.580418477257168,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597794722207204,0,0,0,0,0,0.206651562351531,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,1.96565443335525,1.18157981336281,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26690225624989,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0.481764225311099,0,0,0.687010689511529,0,0.671028323677248,0,0.19538809540204,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,2.78947183551498,0.828851746593443,0,0,0,0,0,0,0,4.04437963111428,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.538651809526579,0.113942055847001,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,1.99052386215701,1.14994833854341,2.4441205797345,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.678923115418936,0,0.225980740780532,0,0,0.0633107959558787,0,0,2.13452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0721064139948,0.916641696046735,0,0.199679000498991,0,0,0.0671834724867263,0,2.32991899054908,1.3393140992228,0.988990300573997,1.07845670166696,0.196854963029498,0,0,0,0,0,0,0,0,0,0.335434687599266,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66380584195206,0,0,0,0,0.704815022316672,0.961086713109252,0.471612915298998,1.65695622138878,0,0,0,0,5.98419583706421,6.7686271386129,6.43325711203269,2.29510841496863,1.25643277000187,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0.943595651135378,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,1.27857558193737,0,0.781514011233092,0,0,0,0,0,0,0.19024743058172,0,0,0.496211178389294,1.05522746615772,0,0.535701835878287,0.336283722218824,0,0,0.0887023701626388,0,0.685952037749674,0,0,0,0,2.51177897121645,0,0,1.82631744101899,0,0,0.428859265059938,0,0,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,6.12870804384764,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,1.0661699095049,0,0.129177819672012,0,0,0.0636471582781649,0.808468755832877,0.653150243690884,0,0,0.430333232356058,0.332660356546013,0,0,0,0,2.34640942403454,2.93379466038879,0.406896178315738,0,0,0 | |||
|short_description=p3@CES1 | |||
}} |
Revision as of 03:40, 12 January 2014
Short description: | p3@CES1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CES1_5end |
Coexpression cluster: | C1133_mature_smooth_bladder_aorta_heart_adipose_penis |
Association with transcript: | -71bp_to_ENST00000360526, ENST00000361503, ENST00000422046, NM_001025194, NM_001025195, NM_001266, uc002eil.2, uc002eim.2, uc002ein.2_5end |
EntrezGene: | 100653057,1066 |
HGNC: | 1863 |
UniProt: | P23141E9PAU8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.62e-18 | 12 |
fat cell | 2.02e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
liver | 1.12e-15 | 19 |
digestive gland | 1.12e-15 | 19 |
liver bud | 1.12e-15 | 19 |
epithelium of foregut-midgut junction | 2.90e-15 | 25 |
anatomical boundary | 2.90e-15 | 25 |
hepatobiliary system | 2.90e-15 | 25 |
foregut-midgut junction | 2.90e-15 | 25 |
septum transversum | 2.90e-15 | 25 |
hepatic diverticulum | 1.99e-13 | 22 |
liver primordium | 1.99e-13 | 22 |
digestive tract diverticulum | 8.27e-13 | 23 |
epithelial sac | 1.02e-11 | 25 |
sac | 3.09e-11 | 26 |
large intestine | 1.48e-09 | 11 |
exocrine gland | 2.73e-09 | 31 |
exocrine system | 2.73e-09 | 31 |
gut epithelium | 3.22e-08 | 54 |
endocrine gland | 3.92e-08 | 35 |
mitral valve | 4.07e-08 | 1 |
uterus or analog | 4.35e-08 | 1 |
subdivision of digestive tract | 7.44e-08 | 118 |
lower lobe of right lung | 9.72e-08 | 1 |
right lung lobe | 9.72e-08 | 1 |
lower lobe of lung | 9.72e-08 | 1 |
lobe of lung | 9.72e-08 | 1 |
right lung | 9.72e-08 | 1 |
maxillary sinus | 1.35e-07 | 1 |
paranasal sinus | 1.35e-07 | 1 |
adult organism | 3.48e-07 | 114 |
colon | 5.67e-07 | 9 |
digestive system | 5.94e-07 | 145 |
digestive tract | 5.94e-07 | 145 |
primitive gut | 5.94e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.35e-07 | 1 |
maxillary sinus cancer | 1.35e-07 | 1 |