FFCP PHASE1:Hg19::chr16:55540311..55540323,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C351 | |||
|description=CAGE_peak_at_chr16:55540311..55540323,+ | |||
|id=chr16:55540311..55540323,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.10e-25!180;CL:0000057!1.78e-18!75;CL:0000048!1.54e-12!430;CL:0000723!7.66e-12!436;CL:0000034!5.92e-11!444;CL:0002620!1.50e-10!23;CL:0002371!1.58e-09!591;CL:0000219!1.97e-08!390;CL:0000144!3.01e-08!625;CL:0002320!4.63e-08!365;CL:0000680!8.01e-08!57;CL:0000056!8.01e-08!57;CL:0000355!8.01e-08!57;CL:0002334!1.34e-07!12;CL:0002539!1.58e-07!10;CL:0000134!2.04e-07!358;CL:0000499!8.27e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002539;1.56e-15;10!CL:0000134;2.47e-12;55!CL:0000048;1.93e-11;58!CL:0000723;6.43e-11;61!CL:0000569;1.04e-10;4!CL:0000135;3.68e-09;3!CL:0000388;3.68e-09;3!CL:0000034;4.18e-09;69!CL:0002559;1.88e-08;5!CL:0002570;1.89e-07;8!CL:0002620;9.37e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,9.31e-16,10;CL:0000048,2.89e-14,427;CL:0000723,7.91e-14,433;CL:0000034,2.90e-13,441;CL:0000134,1.15e-11,354;CL:0002320,3.76e-11,361;CL:0000057,4.45e-11,76;CL:0000569,1.12e-10,4;CL:0000011,1.12e-10,4;CL:0000219,6.48e-10,386;CL:0000135,4.24e-09,3;CL:0000388,4.24e-09,3;CL:0002559,1.74e-08,5;CL:0002570,2.83e-07,8;CL:0000136,6.72e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000011;1.04e-10;4 | |||
|ontology_enrichment_disease=DOID:2394!4.43e-12!14;DOID:193!4.16e-07!29;DOID:120!4.61e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.87e-13;14!DOID:17;7.04e-08;5!DOID:450;7.04e-08;5!DOID:66;7.04e-08;5!DOID:423;7.04e-08;5!DOID:0080000;7.04e-08;5!DOID:11722;7.04e-08;5!DOID:120;1.99e-07;27!DOID:193;8.95e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.04e-13,14;DOID:17,5.31e-08,5;DOID:450,5.31e-08,5;DOID:66,5.31e-08,5;DOID:423,5.31e-08,5;DOID:0080000,5.31e-08,5;DOID:11722,5.31e-08,5;DOID:120,2.40e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0002199!6.39e-10!45;UBERON:0002416!6.39e-10!45;UBERON:0000914!5.05e-09!83;UBERON:0002329!5.05e-09!83;UBERON:0003077!5.05e-09!83;UBERON:0003059!5.05e-09!83;UBERON:0007282!5.05e-09!83;UBERON:0009618!5.05e-09!83;UBERON:0007285!5.05e-09!83;UBERON:0002384!5.64e-09!375;UBERON:0003102!8.18e-09!95;UBERON:0002097!4.61e-08!40;UBERON:0000947!4.69e-08!21;UBERON:0010191!4.69e-08!21;UBERON:0004290!4.73e-08!70;UBERON:0001135!8.09e-08!15;UBERON:0004237!1.58e-07!10;UBERON:0004695!1.58e-07!10;UBERON:0002111!1.58e-07!10;UBERON:0004178!1.58e-07!10;UBERON:0001134!1.82e-07!61;UBERON:0002036!1.82e-07!61;UBERON:0003082!1.82e-07!61;UBERON:0000486!2.21e-07!82;UBERON:0002385!5.76e-07!63;UBERON:0001015!5.76e-07!63;UBERON:0000383!5.76e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;1.56e-15;10!UBERON:0004695;1.56e-15;10!UBERON:0002111;1.56e-15;10!UBERON:0004178;1.56e-15;10!UBERON:0000947;1.76e-12;21!UBERON:0010191;1.76e-12;21!UBERON:0001135;2.79e-12;15!UBERON:0007846;3.68e-09;3!UBERON:0000043;3.68e-09;3!UBERON:0007845;3.68e-09;3!UBERON:0002073;1.88e-08;5!UBERON:0001013;1.74e-07;14!UBERON:0002384;2.68e-07;198!UBERON:0004457;4.29e-07;9!UBERON:0000042;4.29e-07;9!UBERON:0002199;6.99e-07;46!UBERON:0002416;6.99e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,9.31e-16,10;UBERON:0004695,9.31e-16,10;UBERON:0002111,9.31e-16,10;UBERON:0004178,9.31e-16,10;UBERON:0000947,1.26e-12,21;UBERON:0010191,1.26e-12,21;UBERON:0001135,2.43e-12,15;UBERON:0002384,8.07e-12,371;UBERON:0002199,2.62e-09,46;UBERON:0002416,2.62e-09,46;UBERON:0007846,4.24e-09,3;UBERON:0000043,4.24e-09,3;UBERON:0007845,4.24e-09,3;UBERON:0002073,1.74e-08,5;UBERON:0005086,1.74e-08,5;UBERON:0002097,3.22e-08,41;UBERON:0001013,2.39e-07,14;UBERON:0004573,3.94e-07,33;UBERON:0004571,3.94e-07,33 | |||
|phase1_expression=0.726713517082227,1.07050261945492,0.563817616383885,4.00293193412522,1.78784437770915,1.74467704820074,0,0.631719873426831,1.04474251279935,0,0,0,0,0.37129905888014,0.662794751455832,4.03395087871065,6.02694528023977,2.19093027116212,3.41552959153355,0.369363174230364,0,0,0.85870796139317,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,1.15877215168659,0,1.45990461090791,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0,2.98183171017191,0.506522046658319,1.05927344650575,5.16305917347865,1.77334191099179,0,0,0.98667019366864,0.311211035399766,0,0.163461903113459,0,0.576175924479999,0,0.312160076830321,0,0.597794722207204,0,0,0,0.204154171254893,0.245668634623536,0.103325781175765,2.37600571456411,3.70900393917835,0,0,0,0,0,0.877955241761676,0.612975591598039,1.50238058906597,0.113432183160021,1.25572744982203,1.49490172172997,1.69545520927649,2.70081986475962,0.92747276314595,1.03056216018252,0.558350568994769,1.68776332241266,0.584622030967192,1.51460264546469,1.10459878370759,0.969876340912871,2.13005755509969,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0,0,0.36497735907583,1.56449532329816,3.21620469096443,0,5.10804720835177,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0.646358578788889,0,0,2.12750493267896,1.04007436911366,0,0,0,0.57191197463259,1.62786481617433,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.723906533337896,1.2328579353023,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.623912584592421,1.24900292158013,1.41932173530541,0.937131319941706,0.300946099727719,0,0,0.664225598535437,0,0.781952530212746,0.195801157462741,0,0,0,0,0,0,0,1.98486246255021,0.61384789315225,2.52594084989766,0.896974044789907,0,1.93024705372329,0,1.3878872442239,0.710246901252508,0.410635780069046,1.55776328755086,0.813472649219715,0,0.601519410909855,0,0.574072240823034,0.910455840033585,1.57349297951309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0.48335359146061,0.154048617114644,0.15350367472613,0,0.537101224341368,0,0.170453254832202,0.0890320356467374,0,0,0,0,1.85938219718914,3.77774816196768,1.3940745403212,0,1.59691809095107,0,0.55597265731176,0,0.372158369359667,0.316379424718726,0,0,0.855877976067841,0,0,1.07923474549989,0.823611089208164,0.353437207037059,0,0,0,0,0.974853958525138,0,0.272999822815972,1.41405431953713,0,0,0,0.438450885253763,0,0.655894752046633,0.202910376962704,0,0.281695602532241,0,0,0,0.354761064070598,3.37772216476263,7.57378253807774,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02268682502155,0,1.24415835064723,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,1.70913083770502,0,0.359030577639089,0.108647371922008,0,0.549585560411174,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0.832048038078832,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0.397429223405979,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0.713987523454252,0.866851769704557,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0.542999601753713,1.72844298240254,1.30634944043764,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,2.23882204330311,1.16856654923612,1.66441758450784,3.97746311077687,3.77351852628863,0.889811221596536,2.97492088916001,1.20984739010591,2.48699520932449,3.54852359975121,0.63718706865481,2.69881867298163,1.08684069813382,2.90294345488599,2.65841714557995,2.08698024724694,1.35231848097497,2.66563648518157,0.813741466409323,3.09142720644351,0.966695013382396,0.928067519756987,1.19428766609585,0.400027764663154,1.03018711554838,2.35724642136143,0,0.57785949122191,0,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0.106691729694141,0,0,0.736423801007363,0,0,0,0,0,0.109209638192014,0,0,0,0,0.318004350653419,0,0,2.1160556621441,1.531227386766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,1.61364054962816,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,1.71488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0.801711364730253,0,0,0,0,0,0.170426809518315,0,0,0.31020638566432,2.8666168169323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0.679708458751268,0,0.0644578879735772,0,0,0,0,0,0,0,0.157771562193185,0,0,0,7.81189538150178,6.00828317220844,2.16313281061895,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.476128862927481,0,0,0.33639558774184,0,0,0.217716747896961,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:55540311..55540323,+ | |||
}} |
Revision as of 03:39, 12 January 2014
Short description: | p@chr16:55540311..55540323, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:55540311..55540323, + |
Coexpression cluster: | C351_Fibroblast_Smooth_mesenchymal_Adipocyte_tenocyte_Synoviocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 9.31e-16 | 10 |
multi fate stem cell | 2.89e-14 | 427 |
somatic stem cell | 7.91e-14 | 433 |
stem cell | 2.90e-13 | 441 |
mesenchymal cell | 1.15e-11 | 354 |
connective tissue cell | 3.76e-11 | 361 |
fibroblast | 4.45e-11 | 76 |
cardiac mesenchymal cell | 1.12e-10 | 4 |
migratory trunk neural crest cell | 1.12e-10 | 4 |
motile cell | 6.48e-10 | 386 |
fibrocyte | 4.24e-09 | 3 |
tendon cell | 4.24e-09 | 3 |
hair follicle cell | 1.74e-08 | 5 |
mesenchymal stem cell of adipose | 2.83e-07 | 8 |
fat cell | 6.72e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 9.31e-16 | 10 |
arterial system smooth muscle | 9.31e-16 | 10 |
artery smooth muscle tissue | 9.31e-16 | 10 |
aorta smooth muscle tissue | 9.31e-16 | 10 |
aorta | 1.26e-12 | 21 |
aortic system | 1.26e-12 | 21 |
smooth muscle tissue | 2.43e-12 | 15 |
connective tissue | 8.07e-12 | 371 |
integument | 2.62e-09 | 46 |
integumental system | 2.62e-09 | 46 |
dense regular connective tissue | 4.24e-09 | 3 |
tendon | 4.24e-09 | 3 |
regular connective tissue | 4.24e-09 | 3 |
hair follicle | 1.74e-08 | 5 |
hair follicle placode | 1.74e-08 | 5 |
skin of body | 3.22e-08 | 41 |
adipose tissue | 2.39e-07 | 14 |
systemic artery | 3.94e-07 | 33 |
systemic arterial system | 3.94e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.04e-13 | 14 |
musculoskeletal system disease | 5.31e-08 | 5 |
myotonic disease | 5.31e-08 | 5 |
muscle tissue disease | 5.31e-08 | 5 |
myopathy | 5.31e-08 | 5 |
muscular disease | 5.31e-08 | 5 |
myotonic dystrophy | 5.31e-08 | 5 |
female reproductive organ cancer | 2.40e-07 | 27 |