FFCP PHASE1:Hg19::chr16:12121188..12121212,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_at_chr16:12121188..12121212,+ | |||
|id=chr16:12121188..12121212,+ | |||
|ontology_enrichment_celltype=CL:0002159!3.74e-11!13;CL:0000066!9.93e-10!254;CL:0002076!7.34e-09!43 | |||
|ontology_enrichment_celltype_v019=CL:0002159;1.21e-26;14!CL:0002621;2.85e-13;3!CL:0002166;1.10e-11;3!CL:0000240;2.86e-11;6!CL:0000311;2.86e-11;6!CL:0000079;2.86e-11;6!CL:0000237;2.86e-11;6!CL:0000362;3.28e-11;9!CL:0002077;1.13e-10;34!CL:0000575;1.73e-09;2!CL:0000317;7.71e-09;2!CL:1000448;7.71e-09;2!CL:0002308;7.71e-09;2!CL:0002140;7.71e-09;2!CL:0000076;1.21e-08;63!CL:0000312;3.75e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,5.77e-27,14;CL:0000076,4.95e-18,63;CL:0000066,4.99e-17,253;CL:0002621,2.52e-13,3;CL:0002166,4.56e-12,3;CL:0002077,6.18e-12,34;CL:0000240,2.91e-11,6;CL:0000311,2.91e-11,6;CL:0000079,2.91e-11,6;CL:0000237,2.91e-11,6;CL:0000036,2.91e-11,6;CL:0000357,2.91e-11,6;CL:0000114,2.91e-11,6;CL:0000362,2.95e-11,9;CL:0000575,1.81e-09,2;CL:0000317,6.85e-09,2;CL:1000448,6.85e-09,2;CL:0002308,6.85e-09,2;CL:0002140,6.85e-09,2;CL:0000312,3.58e-08,5 | |||
|ontology_enrichment_development_v019=CL:0000357;2.86e-11;6!CL:0000114;2.86e-11;6 | |||
|ontology_enrichment_disease=DOID:1749!7.28e-14!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.01e-26;14!DOID:0050615;1.98e-08;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.82e-26,14;DOID:305,9.04e-09,106;DOID:0050615,2.37e-08,16;DOID:0050687,5.41e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001004!5.81e-09!72;UBERON:0003296!2.41e-07!4;UBERON:0010133!2.41e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;5.13e-17;4!UBERON:0010133;5.13e-17;4!UBERON:0001949;2.85e-13;3!UBERON:0003729;1.16e-10;13!UBERON:0004807;1.36e-10;22!UBERON:0001894;9.70e-10;7!UBERON:0000007;2.26e-09;2!UBERON:0001905;2.31e-09;2!UBERON:0002757;2.31e-09;2!UBERON:0010134;2.31e-09;2!UBERON:0005408;2.31e-09;2!UBERON:0001899;2.31e-09;2!UBERON:0001003;4.29e-09;15!UBERON:0007376;4.29e-09;15!UBERON:0010371;5.55e-09;31!UBERON:0000344;5.62e-09;20!UBERON:0001708;6.95e-09;4!UBERON:0008895;6.95e-09;4!UBERON:0002419;7.71e-09;2!UBERON:0007771;7.71e-09;2!UBERON:0003297;7.71e-09;2!UBERON:0001821;7.71e-09;2!UBERON:0003487;7.71e-09;2!UBERON:0001820;7.71e-09;2!UBERON:0000486;3.34e-08;12!UBERON:0000165;9.10e-08;28!UBERON:0005911;9.58e-08;36!UBERON:0011159;3.41e-07;5!UBERON:0000161;5.24e-07;19!UBERON:0000166;5.24e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,5.69e-17,4;UBERON:0010133,5.69e-17,4;UBERON:0001949,2.52e-13,3;UBERON:0001004,3.33e-11,74;UBERON:0000153,9.35e-11,62;UBERON:0007811,9.35e-11,62;UBERON:0003729,1.17e-10,13;UBERON:0000033,1.36e-10,56;UBERON:0004807,5.12e-10,28;UBERON:0003102,7.60e-10,99;UBERON:0001894,1.03e-09,7;UBERON:0006222,1.03e-09,7;UBERON:0000007,2.31e-09,2;UBERON:0001905,2.51e-09,2;UBERON:0002757,2.51e-09,2;UBERON:0010134,2.51e-09,2;UBERON:0005408,2.51e-09,2;UBERON:0001899,2.51e-09,2;UBERON:0001708,3.63e-09,4;UBERON:0008895,3.63e-09,4;UBERON:0001003,3.99e-09,15;UBERON:0007376,3.99e-09,15;UBERON:0007383,3.99e-09,15;UBERON:0000344,5.66e-09,20;UBERON:0002419,6.85e-09,2;UBERON:0007771,6.85e-09,2;UBERON:0003297,6.85e-09,2;UBERON:0001821,6.85e-09,2;UBERON:0003487,6.85e-09,2;UBERON:0001820,6.85e-09,2;UBERON:0005089,6.85e-09,2;UBERON:0005088,6.85e-09,2;UBERON:0000166,7.36e-08,22;UBERON:0011159,2.04e-07,5;UBERON:0000165,2.05e-07,29;UBERON:0000930,2.05e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.708397031823113,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0.217010870715852,0,0.32389366601898,0,0,0.377875943688809,0,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0.434377689410233,0.605399502633369,0,0,0,0,0.209658645508376,0.112328631146495,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,7.65020105414339,5.56176664176644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,6.76412986071539,4.90943017063502,6.88331028933609,0.121973706129595,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.93876284338815,5.62008766288098,10.2539551859863,2.12953423864618,0,0,0,0,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,1.87467667973554,1.84780341018745,1.98485136139341,0,0.290633938513962,1.91691339582606,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0.541892875087706,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,2.29706215198469,2.60024098414608,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.638063562472921,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92444225451024,3.35151137767894,0,0.0941438007767792,0.86101074534246,0,1.33029046061003,2.52695740227655,0,0,0,0,0,0,0,0,0.106824071127473,0,1.22520107990516,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0.140669416410513,0,0,0,0,0,0.251932747854276,0,0.123084805461069,0,1.07842021376792,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,0,0,2.27586896570999,1.01701460117107,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.153900517007594,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,3.5277263069176,1.48000651186684,0.34945333648406,0,0,0,0.0821154570532092,0.290967049465258,0,0.225980740780532,0,0,0,0,0.721429382263803,0,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275078873194468,0,0,0.77380195455795,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0,0,1.34340638123612,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,8.45778026780006,0,0.157204305099666,0,0,3.95223263795889,0.852548188666271,2.55336503108073,0,0,0,0,2.51286554000375,0,0,0,0,0.110929051536852,0.124192805882767,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02496607435179,0,0,0.138258436151731,0,0,0,0,0,3.38099397373803,0,0,0,0,0,0.559518030877778,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,4.02405645854205,0.235939446695481,1.46742878817343,0,0,0,0,0.300841313397029,0,0,0,0,4.28782650029431,0,0,0,0.0634158101939068,0,0.548257766857182,0,0,0,8.57122937405259,3.02655349996942,4.85572483389305,6.60220354918763,0,0.115233987555779,0,0,0,0,0.556157009460346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0.22910686854405,0,0,0,0.294450700845729,0,0,0,0,1.45713297917742,0.233939463462106,1.59160620129095,0,0,0,5.88755089910027,0.0771741581079447,0,32.9222107453066,0,2.12108892391463,0,0,0,0,0,0,0.0999411559249289,0.535661815816973,8.82237179289229,6.49955070182263,0,0.917458566809082,0.143339583151451,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0.476128862927481,0.904244737704086,1.61394257169231,0.112131862580613,0,0,1.30630048738177,0,0.673520530145875,1.36272190246085,0.332660356546013,0.569822880276821,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | |||
|short_description=p@chr16:12121188..12121212,+ | |||
}} |
Revision as of 02:25, 12 January 2014
Short description: | p@chr16:12121188..12121212, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:12121188..12121212, + |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 5.77e-27 | 14 |
squamous epithelial cell | 4.95e-18 | 63 |
epithelial cell | 4.99e-17 | 253 |
gingival epithelial cell | 2.52e-13 | 3 |
epithelial cell of Malassez | 4.56e-12 | 3 |
ecto-epithelial cell | 6.18e-12 | 34 |
stratified squamous epithelial cell | 2.91e-11 | 6 |
keratin accumulating cell | 2.91e-11 | 6 |
stratified epithelial cell | 2.91e-11 | 6 |
keratinizing barrier epithelial cell | 2.91e-11 | 6 |
epithelial fate stem cell | 2.91e-11 | 6 |
stratified epithelial stem cell | 2.91e-11 | 6 |
surface ectodermal cell | 2.91e-11 | 6 |
epidermal cell | 2.95e-11 | 9 |
corneal epithelial cell | 1.81e-09 | 2 |
sebum secreting cell | 6.85e-09 | 2 |
epithelial cell of sweat gland | 6.85e-09 | 2 |
epithelial cell of skin gland | 6.85e-09 | 2 |
acinar cell of sebaceous gland | 6.85e-09 | 2 |
keratinocyte | 3.58e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.82e-26 | 14 |
carcinoma | 9.04e-09 | 106 |
respiratory system cancer | 2.37e-08 | 16 |
cell type cancer | 5.41e-07 | 143 |