FFCP PHASE1:Hg19::chr16:2521503..2521514,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4917 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8030 | |||
|TSSclassifier=strong | |||
|UniProt=O00634 | |||
|association_with_transcript=3bp_to_ENST00000293973,NM_006181,uc002cqj.2_5end | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_5_at_NTN3_5end | |||
|id=chr16:2521503..2521514,+ | |||
|ontology_enrichment_celltype=CL:0000242!1.60e-10!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.72e-66;2!CL:0000242;1.72e-66;2!CL:0000312;2.22e-27;5!CL:0000240;5.13e-23;6!CL:0000311;5.13e-23;6!CL:0000079;5.13e-23;6!CL:0000237;5.13e-23;6!CL:0002535;5.48e-18;2!CL:0000362;1.01e-15;9!CL:0002159;1.77e-10;14!CL:0000095;5.63e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.45e-66,2;CL:0000312,2.08e-27,5;CL:0000240,4.86e-23,6;CL:0000311,4.86e-23,6;CL:0000079,4.86e-23,6;CL:0000237,4.86e-23,6;CL:0000036,4.86e-23,6;CL:0000357,4.86e-23,6;CL:0000114,4.86e-23,6;CL:0002535,5.48e-18,2;CL:0000362,9.73e-16,9;CL:0002159,1.72e-10,14;CL:0000095,5.54e-08,17;CL:0000123,5.54e-08,17 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.27e-34;1!CL:0000357;5.13e-23;6!CL:0000114;5.13e-23;6 | |||
|ontology_enrichment_disease=DOID:3119!1.29e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:4362;5.35e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,5.35e-08,5 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;5.48e-18;2!UBERON:0004801;5.48e-18;2!UBERON:0001003;7.58e-10;15!UBERON:0007376;7.58e-10;15!UBERON:0000002;7.17e-07;6!UBERON:0001560;7.17e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,5.48e-18,2;UBERON:0004801,5.48e-18,2;UBERON:0001003,7.41e-10,15;UBERON:0007376,7.41e-10,15;UBERON:0007383,7.41e-10,15;UBERON:0000002,7.17e-07,6;UBERON:0001560,7.17e-07,6 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14117339516596,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3678976191108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0.520874984799877,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,5.1516839638757,2.75349954360568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0.169732529954025,0,0.247871528518004,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316027223465453,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0.129177819672012,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0.406896178315738,0,0,0 | |||
|short_description=p5@NTN3 | |||
}} |
Revision as of 01:53, 12 January 2014
Short description: | p5@NTN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NTN3_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | 3bp_to_ENST00000293973, NM_006181, uc002cqj.2_5end |
EntrezGene: | NTN3 |
HGNC: | 8030 |
UniProt: | O00634 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.45e-66 | 2 |
keratinocyte | 2.08e-27 | 5 |
stratified squamous epithelial cell | 4.86e-23 | 6 |
keratin accumulating cell | 4.86e-23 | 6 |
stratified epithelial cell | 4.86e-23 | 6 |
keratinizing barrier epithelial cell | 4.86e-23 | 6 |
epithelial fate stem cell | 4.86e-23 | 6 |
stratified epithelial stem cell | 4.86e-23 | 6 |
surface ectodermal cell | 4.86e-23 | 6 |
epithelial cell of cervix | 5.48e-18 | 2 |
epidermal cell | 9.73e-16 | 9 |
general ecto-epithelial cell | 1.72e-10 | 14 |
neuron associated cell | 5.54e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 5.54e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 5.48e-18 | 2 |
cervix epithelium | 5.48e-18 | 2 |
skin epidermis | 7.41e-10 | 15 |
outer epithelium | 7.41e-10 | 15 |
enveloping layer of ectoderm | 7.41e-10 | 15 |
uterine cervix | 7.17e-07 | 6 |
neck of organ | 7.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 5.35e-08 | 5 |