FFCP PHASE1:Hg19::chr15:76443020..76443024,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C513 | |||
|description=CAGE_peak_at_chr15:76443020..76443024,- | |||
|id=chr15:76443020..76443024,- | |||
|ontology_enrichment_celltype=CL:0002368!4.98e-18!13;CL:0002076!5.09e-16!43;CL:0002202!2.20e-13!9;CL:0002632!2.20e-13!9;CL:0000223!2.76e-10!59;CL:0002328!1.02e-08!3;CL:0000068!1.56e-08!3;CL:0000069!1.56e-08!3;CL:0000307!1.56e-08!3;CL:0000377!1.56e-08!3;CL:0000066!6.55e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.87e-42;13!CL:0002202;1.27e-39;9!CL:0002632;1.27e-39;9!CL:0000307;1.09e-30;3!CL:0002328;3.34e-30;3!CL:0002336;4.10e-23;1!CL:0002261;4.10e-23;1!CL:0002170;4.10e-23;1!CL:0002076;3.69e-14;42!CL:0000575;2.90e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.64e-42,13;CL:0002202,1.21e-39,9;CL:0002632,1.21e-39,9;CL:0000068,1.09e-30,3;CL:0000069,1.09e-30,3;CL:0000307,1.09e-30,3;CL:0000377,1.09e-30,3;CL:0002328,3.10e-30,3;CL:0002336,2.62e-23,1;CL:0002261,2.62e-23,1;CL:0002170,2.62e-23,1;CL:0002076,5.83e-19,42;CL:0000223,9.48e-14,58;CL:0000575,3.24e-12,2 | |||
|ontology_enrichment_development_v019=CL:0000377;1.09e-30;3!CL:0000223;9.37e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!8.61e-10!14;DOID:14566!3.71e-08!239;DOID:0060058!4.89e-08!10;DOID:162!5.47e-08!235 | |||
|ontology_enrichment_disease_v019=DOID:3151;1.87e-23;1!DOID:3149;1.87e-23;1!DOID:3451;1.96e-12;2!DOID:4159;1.96e-12;2!DOID:0060122;1.96e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,2.10e-23,1;DOID:3149,2.10e-23,1;DOID:3451,2.07e-12,2;DOID:4159,2.07e-12,2;DOID:0060122,2.07e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0001004!2.14e-09!72;UBERON:0000065!5.63e-09!53;UBERON:0004815!1.02e-08!3;UBERON:0002031!1.02e-08!3;UBERON:0007196!3.76e-08!14;UBERON:0001558!3.76e-08!14;UBERON:0003729!5.58e-08!5;UBERON:0000072!5.28e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;3.34e-30;3!UBERON:0002031;3.34e-30;3!UBERON:0007196;5.11e-24;15!UBERON:0001558;5.11e-24;15!UBERON:0002185;1.41e-18;5!UBERON:0003126;8.94e-14;7!UBERON:0001005;8.94e-14;7!UBERON:0000485;1.44e-13;7!UBERON:0005178;2.10e-11;34!UBERON:0002224;2.10e-11;34!UBERON:0000065;2.30e-11;44!UBERON:0000072;2.01e-10;37!UBERON:0005181;8.99e-10;35!UBERON:0000014;7.48e-07;4!UBERON:0000964;9.10e-07;4!UBERON:0010409;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,3.10e-30,3;UBERON:0002031,3.10e-30,3;UBERON:0007196,4.96e-24,15;UBERON:0001558,4.96e-24,15;UBERON:0002185,1.35e-18,5;UBERON:0003126,8.94e-14,7;UBERON:0001005,8.94e-14,7;UBERON:0005178,7.37e-11,34;UBERON:0002224,7.37e-11,34;UBERON:0000485,8.79e-11,9;UBERON:0005181,1.47e-10,35;UBERON:0000065,1.92e-10,54;UBERON:0008947,9.35e-10,38;UBERON:0003258,9.35e-10,38;UBERON:0000072,5.94e-08,47;UBERON:0001004,1.19e-07,74;UBERON:0000915,3.23e-07,52;UBERON:0000014,7.70e-07,4;UBERON:0000964,9.63e-07,4;UBERON:0010409,9.63e-07,4;UBERON:0004348,9.63e-07,4;UBERON:0005427,9.63e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,2.75826367343678,1.204823675113,0.369754010166788,0.0774672005803016,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.804231779293047,1.66659201285353,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.141775097242386,0.626909658919938,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275673144969061,0,0,0,0,0.165284915360978,0.768760269460425,1.65896526242959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,6.03272047982209,11.9780083347455,0,0,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,0.490080431962063,0,0,0.0711418433484141,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796554137998498,0,0.472775363535873,0.344743373241465,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0.0979923974143777,0.34823682632161,0,0,0.0967563312890851,0,0.0821154570532092,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0.135904206073614,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0.2249738915515,0,0,2.34804281319486,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74988244777264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0.320075189082423,0.516644938982447,0,0,0.139879507719444,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.917142992608395,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.766574565837572,0,0,0,0,0,0.576169937778896,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0.691259661814092,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684466602170562,0,0,0,0.651226148887796,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:76443020..76443024,- | |||
}} |
Revision as of 00:39, 12 January 2014
Short description: | p@chr15:76443020..76443024, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:76443020..76443024, - |
Coexpression cluster: | C513_Tracheal_Bronchial_squamous_bronchial_Small_oral_medulloblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.64e-42 | 13 |
epithelial cell of tracheobronchial tree | 1.21e-39 | 9 |
epithelial cell of lower respiratory tract | 1.21e-39 | 9 |
duct epithelial cell | 1.09e-30 | 3 |
branched duct epithelial cell | 1.09e-30 | 3 |
tracheal epithelial cell | 1.09e-30 | 3 |
tracheoblast | 1.09e-30 | 3 |
bronchial epithelial cell | 3.10e-30 | 3 |
buccal mucosa cell | 2.62e-23 | 1 |
endothelial cell of viscerocranial mucosa | 2.62e-23 | 1 |
keratinized cell of the oral mucosa | 2.62e-23 | 1 |
endo-epithelial cell | 5.83e-19 | 42 |
endodermal cell | 9.48e-14 | 58 |
corneal epithelial cell | 3.24e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 3.10e-30 | 3 |
epithelium of bronchus | 3.10e-30 | 3 |
tracheobronchial tree | 4.96e-24 | 15 |
lower respiratory tract | 4.96e-24 | 15 |
bronchus | 1.35e-18 | 5 |
trachea | 8.94e-14 | 7 |
respiratory airway | 8.94e-14 | 7 |
thoracic cavity element | 7.37e-11 | 34 |
thoracic cavity | 7.37e-11 | 34 |
simple columnar epithelium | 8.79e-11 | 9 |
thoracic segment organ | 1.47e-10 | 35 |
respiratory tract | 1.92e-10 | 54 |
respiratory primordium | 9.35e-10 | 38 |
endoderm of foregut | 9.35e-10 | 38 |
segment of respiratory tract | 5.94e-08 | 47 |
respiratory system | 1.19e-07 | 74 |
thoracic segment of trunk | 3.23e-07 | 52 |
zone of skin | 7.70e-07 | 4 |
cornea | 9.63e-07 | 4 |
eye surface | 9.63e-07 | 4 |
optic eminence | 9.63e-07 | 4 |
corneal primordium | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.10e-23 | 1 |
keratoacanthoma | 2.10e-23 | 1 |
skin carcinoma | 2.07e-12 | 2 |
skin cancer | 2.07e-12 | 2 |
integumentary system cancer | 2.07e-12 | 2 |