FFCP PHASE1:Hg19::chr15:75249123..75249134,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54913 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30361 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-169bp_to_ENST00000499788_5end | |||
|description=CAGE_peak_3_at_RPP25_5end | |||
|id=chr15:75249123..75249134,- | |||
|ontology_enrichment_celltype=CL:0000066!3.27e-10!254;CL:0000115!3.25e-07!35;CL:0000148!8.40e-07!10;CL:0000541!8.40e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.41e-10;10!CL:0000147;6.85e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.28e-11,253;CL:0000148,3.92e-10,10;CL:0000541,3.92e-10,10;CL:0000115,1.92e-08,36;CL:0000147,1.59e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.50e-08;29 | |||
|ontology_enrichment_disease=DOID:0050687!8.46e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.71e-11,239;DOID:162,2.03e-11,235;DOID:0050687,1.75e-10,143;DOID:305,1.67e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0008947!5.12e-08!38;UBERON:0003258!5.12e-08!38;UBERON:0001737!7.45e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.97e-10;9!UBERON:0001557;7.97e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.23e-10,9;UBERON:0008947,2.93e-07,38;UBERON:0003258,2.93e-07,38 | |||
|phase1_expression=1.45342703416445,0.642301571672949,0.422863212287913,1.0007329835313,0,1.74467704820074,0,0,0.522371256399677,1.72013755551056,0.697801167972428,0.218441372130172,0.263766978228454,0.247532705920093,0,1.34465029290355,0,0,0.487932798790507,0.369363174230364,0.204000691244253,0.626909442956176,0.572471974262113,0.410623275218653,0.125542639594803,0.458480434487708,0.57470412614962,0.787107813136792,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0.880801318004542,0,0.200544447470142,0,1.11957737119962,1.6194683300949,2.06060454107349,0.581592955118259,0,0.485168122375632,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0.422510572623884,0.212604299965044,1.25795187305026,0.336985893439485,0.600707571366025,0.32145117339416,0.285012743741249,0.99458338599545,0.91332076882317,0,0,0,0.426730222566507,0.400395987036012,1.14950487990897,0.661044872784862,0,0,0.587237189370939,0,0,0,0.263384084775077,0,0,0,0.83593247695339,0,0,0,1.33692548262208,0.589211814949674,0,0.270803863765016,1.40900451698243,1.30059347559878,0.657751618414705,0.552700035571697,0,0.14828656316206,0.535081656179426,0,0.793165398882963,0,0,0,0,0,0,0.150575119077773,0,0,0.710331756132051,0,0.201606743224732,0,0,2.43806866313962,1.34140171940727,1.66221330396589,0.722878304769133,0,0.434539556882471,0,0,0.378139268656271,0.221729397462564,0.175669571386252,0.72038491523742,1.09288586487763,0.370784442784429,1.62273696827342,1.0447784237956,1.46253756570752,0,1.14398982156026,0.371457501329565,0.198762407366705,0,0.694281003215189,0,0.419499436209906,3.57653454522088,1.46296476575767,1.29208379584664,2.13459757612026,1.33888245105868,1.61131726843659,1.52054421143703,1.70843440283719,0,0.81014194788176,0.892997282840798,0.898117490504679,2.25222960966644,3.06633274931766,0.949265659568129,1.83201743930407,0,0,1.3082821564276,0,0.506522046658319,0,0,1.06400514659507,1.68203280042692,1.06748995729705,0.74000264525148,0.622422070799533,0.808264032418128,1.47115712802113,0.454072282934794,0,1.87457145467037,2.18512053781224,1.71141546463335,1.94283284717341,0.939475989150119,1.13311061057692,0.98315564691574,0.204154171254893,0.737005903870608,1.34323515528495,1.18800285728205,0.494533858557114,1.82032272387605,0.718618141816238,1.0100166837244,0.375355559615893,0.554128230968366,0,0,1.95309476578576,1.36118619792025,0,0,0,0,0.103052529238439,0,0.558350568994769,0,0.292311015483596,0,0.184099797284599,0.323292113637624,0.710019185033229,0.10075209822764,0.339121184620975,0.386521706326594,0.545492241181669,0.286804595389004,1.58565817968474,1.45782745153634,2.09149097165133,1.0366105501537,2.27088765788066,1.82488679537915,0,0,0,0,0.721879481669586,3.19428360107579,3.87744787179634,3.13314338848527,2.86764329104224,1.74303555273925,4.74541238222193,3.50561401216427,2.35465758150415,2.69323009862473,0,5.60967095213783,2.057870056657,2.94017422771084,0,0.982827216677626,0,0,0.860919069801795,0,0.109750285408626,0,0.301586917234893,0.185176890317059,3.9096996637239,5.19967392639789,0,0.115930404975077,0.234817388471643,1.87676382089396,1.38895653772983,1.33177906564219,0,3.43394464837949,1.72351904261178,1.17002132569619,1.18904929830983,0,0,0,0.0895585227028483,0.290633938513962,0.383382679165211,0,0.264145302039678,0.414656231081544,0.144119953416961,0.50496973370552,2.92090313743978,4.20187268114105,4.68869788840188,3.4214489204541,2.26220483947312,3.30377363628309,2.00078502841405,0.784917590417525,0,0.95339771567235,0.646358578788889,10.7296933755565,0,0.797814349754612,1.04007436911366,0,0,0,0.714889968290738,4.34097284313154,1.64648067356154,0.325736184293735,0.355391948742546,1.58390374586686,1.20575750823834,0.871533458600294,0.699810938274399,1.2162378064119,3.01354254859276,0,0.479249710983165,0,0,0.144781306667579,0.205476322550383,0.179060963239896,1.00876629594175,0,0,0,0.254094624222463,1.30139853857622,0,0.670065061337395,0,0,0,0,0.36807447515742,0,0,0.207970861530807,0.535286966391485,0.157702415033935,0,0.601892199455438,0,2.0694614258501,0.664225598535437,0.553107505625109,0.434418072340414,0.979005787313703,0.686286847621712,0.206768026122887,0.215714200818617,0,2.42502057157008,0,0.30239029332968,0.744323423456331,0,1.68396056659844,0.512556597022804,0.511707249066704,0.64341568457443,0,0.771048469013278,2.66342587969691,0.98552587216571,0,0.697262270759755,2.41718899183244,0.40101294060657,0.736647911487171,0.918515585316854,0.364182336013434,0.262248829918848,1.35359883872224,0.462092022626489,1.56869953835371,0,0.105551628892876,1.13733384070897,1.53084334748864,0.863663664408557,6.16909010761157,0.812839312631559,0.501689773854853,0.764628819135115,0.831076008928724,0.223874754722178,0.219259876645935,0,1.28225062558195,0.984043937099117,0.976135183992909,0.721287081534056,0.0915694648183434,0.41254749960294,0,0,0,0.580024309752732,1.07834031980251,0.767518373630648,0.689182862422653,0.107420244868274,0.435050081742686,1.27839941124151,0.356128142586949,0.330569830721956,0.1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| |||
|short_description=p3@RPP25 | |||
}} |
Revision as of 00:34, 12 January 2014
Short description: | p3@RPP25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RPP25_5end |
Coexpression cluster: | NA |
Association with transcript: | -169bp_to_ENST00000499788_5end |
EntrezGene: | RPP25 |
HGNC: | 30361 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.28e-11 | 253 |
melanocyte | 3.92e-10 | 10 |
melanoblast | 3.92e-10 | 10 |
endothelial cell | 1.92e-08 | 36 |
pigment cell | 1.59e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.23e-10 | 9 |
respiratory primordium | 2.93e-07 | 38 |
endoderm of foregut | 2.93e-07 | 38 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.71e-11 | 239 |
cancer | 2.03e-11 | 235 |
cell type cancer | 1.75e-10 | 143 |
carcinoma | 1.67e-08 | 106 |