FFCP PHASE1:Hg19::chr15:74219026..74219037,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4016 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6665 | |||
|TSSclassifier=weak | |||
|UniProt=Q08397 | |||
|association_with_transcript=223bp_to_ENST00000395162_5end | |||
|description=CAGE_peak_3_at_LOXL1_5end | |||
|id=chr15:74219026..74219037,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.45e-42!180;CL:0000057!8.45e-23!75;CL:0000680!1.75e-21!57;CL:0000056!1.75e-21!57;CL:0000355!1.75e-21!57;CL:0000183!6.60e-20!59;CL:0000187!2.41e-19!54;CL:0000192!7.60e-16!42;CL:0000514!7.60e-16!42;CL:0000393!9.85e-16!60;CL:0000211!9.85e-16!60;CL:0000048!3.30e-15!430;CL:0000359!4.63e-15!32;CL:0000723!2.84e-14!436;CL:0000034!2.17e-13!444;CL:0002371!3.66e-12!591;CL:0000144!4.63e-11!625;CL:0002620!4.63e-10!23;CL:0000548!1.58e-09!679;CL:0000004!1.58e-09!679;CL:0000255!1.58e-09!679;CL:0000222!1.89e-09!119;CL:0000012!3.51e-09!682;CL:0002334!1.55e-08!12;CL:0000136!5.25e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.60e-15;32!CL:0000192;1.09e-12;43!CL:0002334;1.93e-10;12!CL:0002620;3.36e-10;23!CL:0000187;1.46e-08;55!CL:0002559;3.86e-08;5!CL:0002539;9.57e-08;10!CL:0000057;2.29e-07;73!CL:0002320;2.62e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.24e-21,76;CL:0000680,4.00e-17,58;CL:0000056,4.00e-17,58;CL:0000355,4.00e-17,58;CL:0000048,4.68e-17,427;CL:0000723,2.37e-16,433;CL:0000359,1.90e-15,32;CL:0000034,1.91e-15,441;CL:0000192,1.13e-14,43;CL:0000514,1.13e-14,43;CL:0000187,1.48e-14,55;CL:0000393,3.34e-12,61;CL:0000211,3.34e-12,61;CL:0002620,2.33e-10,23;CL:0002334,2.68e-10,12;CL:0002320,3.46e-09,361;CL:0002559,4.44e-08,5;CL:0002539,9.64e-08,10;CL:0000134,9.30e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000514;1.09e-12;43!CL:0000355;8.52e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.94e-23!83;UBERON:0002329!1.94e-23!83;UBERON:0003077!1.94e-23!83;UBERON:0003059!1.94e-23!83;UBERON:0007282!1.94e-23!83;UBERON:0009618!1.94e-23!83;UBERON:0007285!1.94e-23!83;UBERON:0004290!1.21e-21!70;UBERON:0002385!3.30e-19!63;UBERON:0001015!3.30e-19!63;UBERON:0000383!3.30e-19!63;UBERON:0001134!7.33e-19!61;UBERON:0002036!7.33e-19!61;UBERON:0003082!7.33e-19!61;UBERON:0000486!1.65e-18!82;UBERON:0001637!4.74e-12!42;UBERON:0003509!4.74e-12!42;UBERON:0004572!4.74e-12!42;UBERON:0004573!8.90e-11!33;UBERON:0004571!8.90e-11!33;UBERON:0005256!1.52e-10!143;UBERON:0002049!1.04e-09!79;UBERON:0007798!1.04e-09!79;UBERON:0004872!2.15e-09!84;UBERON:0004535!2.51e-08!110;UBERON:0002199!3.19e-08!45;UBERON:0002416!3.19e-08!45;UBERON:0001009!4.17e-08!113;UBERON:0001981!9.03e-08!60;UBERON:0007500!9.03e-08!60;UBERON:0004537!9.03e-08!60;UBERON:0006965!9.03e-08!60;UBERON:0002100!9.50e-08!216;UBERON:0002384!1.47e-07!375;UBERON:0002097!5.62e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.20e-13;33!UBERON:0004571;5.20e-13;33!UBERON:0001637;1.71e-09;42!UBERON:0003509;1.71e-09;42!UBERON:0004572;1.71e-09;42!UBERON:0002073;3.86e-08;5!UBERON:0000947;5.97e-08;21!UBERON:0010191;5.97e-08;21!UBERON:0004905;6.97e-08;8!UBERON:0000982;6.97e-08;8!UBERON:0004770;6.97e-08;8!UBERON:0004237;9.57e-08;10!UBERON:0004695;9.57e-08;10!UBERON:0002111;9.57e-08;10!UBERON:0004178;9.57e-08;10!UBERON:0002384;1.23e-07;198!UBERON:0002204;1.35e-07;70!UBERON:0002199;1.97e-07;46!UBERON:0002416;1.97e-07;46!UBERON:0002097;2.53e-07;41!UBERON:0005284;7.76e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,4.76e-18,73;UBERON:0002329,9.45e-18,71;UBERON:0003059,9.45e-18,71;UBERON:0007282,9.45e-18,71;UBERON:0004290,9.45e-18,71;UBERON:0009618,9.45e-18,71;UBERON:0003077,2.48e-17,72;UBERON:0007285,2.48e-17,72;UBERON:0000486,1.09e-15,83;UBERON:0001134,2.50e-15,62;UBERON:0002036,2.50e-15,62;UBERON:0003082,2.50e-15,62;UBERON:0007503,4.58e-15,78;UBERON:0004573,6.07e-15,33;UBERON:0004571,6.07e-15,33;UBERON:0002385,1.60e-14,64;UBERON:0001015,1.60e-14,64;UBERON:0000383,1.60e-14,64;UBERON:0001637,1.35e-12,42;UBERON:0003509,1.35e-12,42;UBERON:0004572,1.35e-12,42;UBERON:0002199,6.99e-11,46;UBERON:0002416,6.99e-11,46;UBERON:0002384,3.94e-10,371;UBERON:0002097,9.22e-10,41;UBERON:0002204,3.98e-08,167;UBERON:0000947,4.43e-08,21;UBERON:0010191,4.43e-08,21;UBERON:0002073,4.44e-08,5;UBERON:0005086,4.44e-08,5;UBERON:0002049,5.09e-08,78;UBERON:0007798,5.09e-08,78;UBERON:0004905,8.47e-08,8;UBERON:0000982,8.47e-08,8;UBERON:0004770,8.47e-08,8;UBERON:0004237,9.64e-08,10;UBERON:0004695,9.64e-08,10;UBERON:0002111,9.64e-08,10;UBERON:0004178,9.64e-08,10;UBERON:0005256,2.97e-07,122;UBERON:0007500,5.57e-07,59;UBERON:0001981,5.57e-07,59;UBERON:0004537,5.57e-07,59;UBERON:0006965,5.57e-07,59;UBERON:0005284,7.51e-07,5 | |||
|phase1_expression=1.45342703416445,0.856402095563933,1.9733616573436,1.0007329835313,0.446961094427288,3.48935409640147,0,5.05375898741465,1.30592814099919,0,0,0,0,3.83675694176145,7.95353701746998,1.34465029290355,0,3.65155045193687,0,1.84681587115182,4.48801520737357,1.25381888591235,0.286235987131057,0.273748850145768,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.255725123687061,6.86734389530676,5.51471701699479,3.62116297402059,0,2.43317435151318,0.189069634328136,0.221729397462564,0.527008714158756,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,5.96366342034382,3.92554586160197,3.97227542439656,9.75244510545967,4.61068896857864,3.92474320099615,0,1.48000529050296,0,0.538842688278752,0.326923806226917,4.69208025699287,4.60940739583999,0,2.49728061464256,1.71141546463335,0.747243402759005,0.23486899728753,0,0,3.0623125688234,0.859840221182376,1.85986406116378,0,0,2.73048408581408,1.43723628363248,0.336672227908132,0.125118519871964,0.277064115484183,1.31693286264251,3.37136575378922,1.35214253015937,0.567160915800105,5.202299434977,1.70845911054854,4.4505699243508,3.90118424909723,0.92747276314595,2.57640540045629,4.83903826462134,19.4092782077456,4.48210223741514,3.5340728394176,2.94559675655358,2.90962902273861,8.52023022039874,1.61203357164224,1.01736355386293,0,0,0,0,0,0,0.10366105501537,0,0,25.0319251727706,22.513432836751,8.28809528114883,4.17931135228781,10.1063127433742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,1.76113041353732,0,0,0,0.790204397959275,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.22001485746285,0.129271715757778,14.3062578340753,0,0.26593811658487,1.04007436911366,0.257207374262142,0,1.3321108950805,0,0.542621605391443,0,0,0,0,0,0,0.299918973546171,0,0,0,20.6077375722761,3.44585807502342,5.70547620162874,7.23906533337896,5.95881335396112,4.47652408099739,0,0,0,0,0,0,0,0,0,0,0,1.24324654030811,3.0672872929785,5.50187573165645,1.08506009479894,6.03115498439341,10.8841683166269,7.254311091561,13.1198384791839,37.6182624659649,15.9185252839189,9.31257641632544,0.664225598535437,5.8998133933345,1.82455590382974,23.1045365806034,8.5785855952714,0,0.215714200818617,0,0,0,0.604780586659361,6.20269519546942,2.76231551918512,3.08726103876381,8.58532300013196,1.02341449813341,4.18220194973379,5.93672265779964,0.925258162815933,1.77561725313127,2.21743321237285,1.03850885836724,1.39452454151951,0,0,0,0.574072240823034,1.63882051206045,1.31124414959424,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0.447749509444357,0,0,1.53870075069834,0.984043937099117,0.650756789328606,0,0,0,0,0,0,0.96670718292122,1.07834031980251,1.84204409671355,0.137836572484531,0.751941714077915,1.0151168573996,0.255679882248303,0.445160178233687,0,0,0,0,5.11330104227014,20.4628025439916,3.485186350803,10.1651081458109,2.66153015158511,7.82939692867565,2.22389062924704,1.00187420719394,4.46590043231601,13.9206946876239,1.33441135746677,8.70052490458535,7.70290178461057,8.90969094192623,0,0,0.823611089208164,0.235624804691373,4.44801459461295,1.58510321173008,0.842516912477962,0,2.43713489631284,2.11300293513511,0.409499734223957,0.565621727814851,7.910568163417,3.30819206127675,3.3171948762061,11.3997230165978,3.47265320560013,0,0.202910376962704,0.6196469961995,1.40847801266121,0.143411352204052,0.196498082026242,0.35667105148125,1.41904425628239,12.2442428472645,10.5374365747169,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,1.79323189425963,0,0,0,0,1.86623752597084,0,0,0,0.0986434056369336,0,11.1136990144637,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02197054811161,0,0.103688191397247,0,0,0,0,0,0.554698692052555,0,0,0,0,0,0,0,0,0.193978032976839,0,0.677942222341597,0,0,0,0,0.0801588202515337,0.213452994739353,0.19980960958213,0,0,0,0.14405479798815,0.124252535565433,0,0.407712618220842,0.627617077873999,0.407992870545287,0,0,0,0,1.28929632425987,0,0.279282401272254,0,0,0,0.429226048136571,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0.179287339332845,0,0,0.662091970365432,0,16.2899880526114,9.50643640321395,15.0230185650328,0,0,1.70388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0,0.992332043623902,0,0,0,0.544017803369474,1.0027595760908,0.612691153526923,0.327872630709804,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,2.08956724041624,0.467426619694449,2.77402930751307,9.28074725847937,13.0815308911339,27.5841478694926,1.37304041038154,6.2004678742928,0.93262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| |||
|short_description=p3@LOXL1 | |||
}} |
Revision as of 00:28, 12 January 2014
Short description: | p3@LOXL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOXL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 223bp_to_ENST00000395162_5end |
EntrezGene: | LOXL1 |
HGNC: | 6665 |
UniProt: | Q08397 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.24e-21 | 76 |
muscle precursor cell | 4.00e-17 | 58 |
myoblast | 4.00e-17 | 58 |
multi-potent skeletal muscle stem cell | 4.00e-17 | 58 |
multi fate stem cell | 4.68e-17 | 427 |
somatic stem cell | 2.37e-16 | 433 |
vascular associated smooth muscle cell | 1.90e-15 | 32 |
stem cell | 1.91e-15 | 441 |
smooth muscle cell | 1.13e-14 | 43 |
smooth muscle myoblast | 1.13e-14 | 43 |
muscle cell | 1.48e-14 | 55 |
electrically responsive cell | 3.34e-12 | 61 |
electrically active cell | 3.34e-12 | 61 |
skin fibroblast | 2.33e-10 | 23 |
preadipocyte | 2.68e-10 | 12 |
connective tissue cell | 3.46e-09 | 361 |
hair follicle cell | 4.44e-08 | 5 |
aortic smooth muscle cell | 9.64e-08 | 10 |
mesenchymal cell | 9.30e-07 | 354 |