FFCP PHASE1:Hg19::chr15:55906703..55906714,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=283659 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=26373 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-83bp_to_AK022857_5end | |||
|coexpression_cluster_id=C1742 | |||
|description=CAGE_peak_4_at_PRTG_5end | |||
|id=chr15:55906703..55906714,- | |||
|ontology_enrichment_celltype=CL:0002322!7.56e-13!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;5.92e-51;5!CL:0000148;5.77e-26;10!CL:0000147;8.52e-19;14!CL:0002321;1.34e-17;15!CL:0000710;2.14e-13;20!CL:0000075;4.12e-10;27!CL:0002077;8.03e-08;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.65e-51,5;CL:0000148,6.56e-26,10;CL:0000541,6.56e-26,10;CL:0000147,9.34e-19,14;CL:0000710,2.28e-13,20;CL:0000333,5.73e-11,41;CL:0000075,4.32e-10,27;CL:0002077,3.76e-08,34;CL:0000133,7.27e-08,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.29e-08!143;DOID:305!6.71e-08!106;DOID:14566!3.45e-07!239;DOID:162!4.90e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.13e-12;22!DOID:2994;2.13e-12;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.09e-12,22;DOID:2994,2.09e-12,22 | |||
|ontology_enrichment_uberon=UBERON:0000160!2.82e-07!27 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0.265059536642971,1.2781333715647,2.28054321033815,1.00928340350251,0.36497735907583,0,0,0,0,0,0,0,0.241011029883482,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.165018999841176,0,0,0,0.193341436584244,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0.0897576444097721,0.434589487688032,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0.296521128680622,0,0.104421949505455,0,0,0,0.182454789215666,0,0.242780379534093,0.394584402849391,0,0,0,0.150323419414493,0,0,0.661983911750998,0,0,0.569219092059585,0,0,0,0,0,0,0,0.0730893170861856,0.164230914106418,0,0,0.451961481561065,0,0,0,0.195551382734803,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472699093843342,0.247247575143499,0.337017719270924,0,0,0,0.136203406111576,0.643012593860077,0,0.415440338029185,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,1.38348634936231,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504143392443436,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0.261906694481422,0,0.147856086217045,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.236387681767936,0,0,0,0.280272163313789,0.913158720509496,0,0,0,0.316027223465453,0.348724276104376,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0.218559560503957,0,0,0.235676547101626,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65882632021729,3.27796715891087,2.66066852124018,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0.23806443146374,0,0,0,0.12729431655633,0.404234377916439,0,0,0,0,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p4@PRTG | |||
}} |
Revision as of 23:42, 11 January 2014
Short description: | p4@PRTG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_4_at_PRTG_5end |
Coexpression cluster: | C1742_teratocarcinoma_H9_hepatoblastoma_pancreatic_choriocarcinoma_pineal_mesodermal |
Association with transcript: | -83bp_to_AK022857_5end |
EntrezGene: | PRTG |
HGNC: | 26373 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.65e-51 | 5 |
melanocyte | 6.56e-26 | 10 |
melanoblast | 6.56e-26 | 10 |
pigment cell | 9.34e-19 | 14 |
neurecto-epithelial cell | 2.28e-13 | 20 |
migratory neural crest cell | 5.73e-11 | 41 |
columnar/cuboidal epithelial cell | 4.32e-10 | 27 |
ecto-epithelial cell | 3.76e-08 | 34 |
neurectodermal cell | 7.27e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.09e-12 | 22 |
germ cell cancer | 2.09e-12 | 22 |