FFCP PHASE1:Hg19::chr15:52483579..52483605,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10681 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4401 | |||
|TSSclassifier=strong | |||
|UniProt=O14775 | |||
|association_with_transcript=-13bp_to_ENST00000261837_5end | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_5_at_GNB5_5end | |||
|id=chr15:52483579..52483605,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;6.30e-21;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.40e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!1.10e-40!2;UBERON:0002757!1.10e-40!2;UBERON:0010134!1.10e-40!2;UBERON:0002784!1.10e-40!2;UBERON:0005408!1.10e-40!2;UBERON:0001899!1.10e-40!2;UBERON:0003296!6.33e-21!4;UBERON:0010133!6.33e-21!4;UBERON:0000966!6.40e-17!5;UBERON:0005388!6.40e-17!5;UBERON:0001802!6.40e-17!5;UBERON:0000970!2.79e-16!20;UBERON:0002104!1.58e-15!21;UBERON:0000020!3.26e-14!23;UBERON:0001032!1.23e-13!24;UBERON:0004456!1.23e-13!24;UBERON:0001894!2.12e-12!7;UBERON:0006222!2.12e-12!7;UBERON:0000019!5.03e-10!19;UBERON:0000047!5.03e-10!19;UBERON:0004088!5.03e-10!19;UBERON:0003072!5.03e-10!19;UBERON:0003071!5.03e-10!19;UBERON:0004128!5.03e-10!19;UBERON:0001456!3.96e-09!21;UBERON:0003056!3.96e-08!61;UBERON:0005085!9.13e-07!29 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;6.38e-79;2!UBERON:0002757;6.38e-79;2!UBERON:0010134;6.38e-79;2!UBERON:0005408;6.38e-79;2!UBERON:0001899;6.38e-79;2!UBERON:0003296;3.66e-40;4!UBERON:0010133;3.66e-40;4!UBERON:0002784;3.66e-40;4!UBERON:0001894;1.70e-23;7!UBERON:0000966;2.74e-09;5!UBERON:0005388;2.74e-09;5!UBERON:0001802;2.74e-09;5!UBERON:0000970;5.26e-09;20!UBERON:0002104;1.27e-08;21!UBERON:0000020;5.87e-08;23!UBERON:0001032;1.15e-07;24!UBERON:0004456;1.15e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,7.79e-79,2;UBERON:0002757,7.79e-79,2;UBERON:0010134,7.79e-79,2;UBERON:0005408,7.79e-79,2;UBERON:0001899,7.79e-79,2;UBERON:0003296,4.05e-40,4;UBERON:0010133,4.05e-40,4;UBERON:0002784,4.05e-40,4;UBERON:0001894,1.80e-23,7;UBERON:0006222,1.80e-23,7;UBERON:0000970,1.27e-08,21;UBERON:0002104,1.27e-08,21;UBERON:0000966,5.92e-08,6;UBERON:0005388,5.92e-08,6;UBERON:0001802,5.92e-08,6;UBERON:0000020,1.15e-07,24;UBERON:0001032,1.15e-07,24;UBERON:0004456,1.15e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0.846458889008016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.5642474110285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,4.37168838884471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2238322911546,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439762066981716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@GNB5 | |||
}} |
Revision as of 23:37, 11 January 2014
Short description: | p5@GNB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GNB5_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | -13bp_to_ENST00000261837_5end |
EntrezGene: | GNB5 |
HGNC: | 4401 |
UniProt: | O14775 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 7.79e-79 | 2 |
regional part of epithalamus | 7.79e-79 | 2 |
secretory circumventricular organ | 7.79e-79 | 2 |
circumventricular organ | 7.79e-79 | 2 |
epithalamus | 7.79e-79 | 2 |
gland of diencephalon | 4.05e-40 | 4 |
neuroendocrine gland | 4.05e-40 | 4 |
regional part of diencephalon | 4.05e-40 | 4 |
diencephalon | 1.80e-23 | 7 |
future diencephalon | 1.80e-23 | 7 |
eye | 1.27e-08 | 21 |
visual system | 1.27e-08 | 21 |
retina | 5.92e-08 | 6 |
photoreceptor array | 5.92e-08 | 6 |
posterior segment of eyeball | 5.92e-08 | 6 |
sense organ | 1.15e-07 | 24 |
sensory system | 1.15e-07 | 24 |
entire sense organ system | 1.15e-07 | 24 |