FFCP PHASE1:Hg19::chr15:50647370..50647405,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2553 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4074 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000396464,ENST00000558970,ENST00000560825,ENST00000560896_5end | |||
|description=CAGE_peak_2_at_GABPB1_5end | |||
|id=chr15:50647370..50647405,- | |||
|ontology_enrichment_celltype=CL:0000012!7.86e-09!682;CL:0000548!2.08e-08!679;CL:0000004!2.08e-08!679;CL:0000255!2.08e-08!679 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.95e-07;29 | |||
|ontology_enrichment_disease=DOID:162!1.24e-18!235;DOID:14566!5.48e-18!239;DOID:305!6.69e-14!106;DOID:0050687!1.04e-11!143;DOID:0050686!9.03e-10!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.26e-18,235;DOID:14566,5.50e-18,239;DOID:305,6.68e-14,106;DOID:0050687,1.05e-11,143;DOID:0050686,9.02e-10,137 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.15e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.41e-07;9!UBERON:0001557;4.41e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.15e-07,9 | |||
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| |||
|short_description=p2@GABPB1 | |||
}} |
Revision as of 23:29, 11 January 2014
Short description: | p2@GABPB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GABPB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000396464, ENST00000558970, ENST00000560825, ENST00000560896_5end |
EntrezGene: | GABPB1 |
HGNC: | 4074 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 5.15e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.26e-18 | 235 |
disease of cellular proliferation | 5.50e-18 | 239 |
carcinoma | 6.68e-14 | 106 |
cell type cancer | 1.05e-11 | 143 |
organ system cancer | 9.02e-10 | 137 |