FFCP PHASE1:Hg19::chr15:41057899..41057937,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2644 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4194 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=81bp_to_ENST00000558467_5end | |||
|description=CAGE_peak_2_at_GCHFR_5end | |||
|id=chr15:41057899..41057937,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.72e-11;3!CL:0000067;1.72e-11;3!CL:0005012;1.72e-11;3!CL:0002304;1.72e-11;3!CL:0000075;1.25e-10;27!CL:0000306;1.53e-08;4!CL:0002222;1.53e-08;4!CL:0002224;1.53e-08;4!CL:1000507;2.34e-08;10!CL:1000494;2.34e-08;10!CL:0000650;1.61e-07;2!CL:1000500;1.61e-07;2!CL:1000618;1.61e-07;2!CL:1001318;1.61e-07;2!CL:0002173;1.61e-07;2!CL:0002549;3.84e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.74e-11,3;CL:0000067,1.74e-11,3;CL:0005012,1.74e-11,3;CL:0002304,1.74e-11,3;CL:0000075,1.70e-10,27;CL:0000306,1.50e-08,4;CL:0002222,1.50e-08,4;CL:0002224,1.50e-08,4;CL:1000507,2.54e-08,10;CL:1000494,2.54e-08,10;CL:0000650,1.84e-07,2;CL:1000500,1.84e-07,2;CL:1000618,1.84e-07,2;CL:1001318,1.84e-07,2;CL:0002173,1.84e-07,2;CL:0002549,1.90e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.20e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000064!1.01e-11!219;UBERON:0000063!2.97e-11!97;UBERON:0003075!5.56e-10!86;UBERON:0007284!5.56e-10!86;UBERON:0002346!1.77e-09!90;UBERON:0002680!5.69e-09!9;UBERON:0001895!5.69e-09!9;UBERON:0010092!5.69e-09!9;UBERON:0004733!1.15e-08!12;UBERON:0002028!1.15e-08!12;UBERON:0007277!1.15e-08!12;UBERON:0000153!1.34e-08!129;UBERON:0007811!1.34e-08!129;UBERON:0000033!9.47e-08!123;UBERON:0004732!9.87e-08!13;UBERON:0000481!1.28e-07!347;UBERON:0003076!1.34e-07!15;UBERON:0003057!1.34e-07!15;UBERON:0004121!2.14e-07!169;UBERON:0000924!3.52e-07!173;UBERON:0006601!3.52e-07!173;UBERON:0002037!4.87e-07!6;UBERON:0006215!4.87e-07!6;UBERON:0002616!5.75e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;2.74e-19;11!UBERON:0000488;7.37e-15;4!UBERON:0001801;7.87e-15;14!UBERON:0002037;3.00e-13;6!UBERON:0000019;3.84e-13;19!UBERON:0000047;3.84e-13;19!UBERON:0004088;3.84e-13;19!UBERON:0010230;3.84e-13;19!UBERON:0000020;6.60e-13;23!UBERON:0000970;2.15e-12;20!UBERON:0001032;2.79e-12;24!UBERON:0004456;2.79e-12;24!UBERON:0002104;1.02e-11;21!UBERON:0001456;1.02e-11;21!UBERON:0001778;1.72e-11;3!UBERON:0001775;1.72e-11;3!UBERON:0006876;1.03e-10;11!UBERON:0002203;6.82e-10;6!UBERON:0001768;6.82e-10;6!UBERON:0002200;6.82e-10;6!UBERON:0002680;1.00e-08;9!UBERON:0001895;1.00e-08;9!UBERON:0010371;1.11e-08;31!UBERON:0010077;1.53e-08;4!UBERON:0005389;1.53e-08;4!UBERON:0000484;1.53e-08;4!UBERON:0000965;1.53e-08;4!UBERON:0001803;1.53e-08;4!UBERON:0004211;2.34e-08;10!UBERON:0009773;2.34e-08;10!UBERON:0001231;2.34e-08;10!UBERON:0004810;2.34e-08;10!UBERON:0006562;1.43e-07;2!UBERON:0003567;1.61e-07;2!UBERON:0003838;1.61e-07;2!UBERON:0003586;1.61e-07;2!UBERON:0005169;1.61e-07;2!UBERON:0002321;1.61e-07;2!UBERON:0005215;1.61e-07;2!UBERON:0002303;1.61e-07;2!UBERON:0002319;1.61e-07;2!UBERON:0005629;3.84e-07;2!UBERON:0005358;3.84e-07;2!UBERON:0001886;3.84e-07;2!UBERON:0004086;3.84e-07;2!UBERON:0005282;3.84e-07;2!UBERON:0005281;3.84e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,3.53e-19,11;UBERON:0001801,7.38e-15,14;UBERON:0000488,7.44e-15,4;UBERON:0002037,2.30e-13,6;UBERON:0006215,2.30e-13,6;UBERON:0000019,2.39e-12,20;UBERON:0000047,2.39e-12,20;UBERON:0010312,2.39e-12,20;UBERON:0004088,2.39e-12,20;UBERON:0010230,2.39e-12,20;UBERON:0003072,2.39e-12,20;UBERON:0004128,2.39e-12,20;UBERON:0003071,2.39e-12,20;UBERON:0000020,2.67e-12,24;UBERON:0001032,2.67e-12,24;UBERON:0004456,2.67e-12,24;UBERON:0000970,1.13e-11,21;UBERON:0002104,1.13e-11,21;UBERON:0001778,1.74e-11,3;UBERON:0001775,1.74e-11,3;UBERON:0001456,4.62e-11,22;UBERON:0006876,7.07e-11,11;UBERON:0002203,6.86e-10,6;UBERON:0001768,6.86e-10,6;UBERON:0002200,6.86e-10,6;UBERON:0005085,5.42e-09,31;UBERON:0002680,8.42e-09,9;UBERON:0001895,8.42e-09,9;UBERON:0010092,8.42e-09,9;UBERON:0010077,1.50e-08,4;UBERON:0005389,1.50e-08,4;UBERON:0000484,1.50e-08,4;UBERON:0002546,1.50e-08,4;UBERON:0000965,1.50e-08,4;UBERON:0001803,1.50e-08,4;UBERON:0003073,1.50e-08,4;UBERON:0005426,1.50e-08,4;UBERON:0004810,2.54e-08,10;UBERON:0003567,1.84e-07,2;UBERON:0003838,1.84e-07,2;UBERON:0003586,1.84e-07,2;UBERON:0005169,1.84e-07,2;UBERON:0002321,1.84e-07,2;UBERON:0005215,1.84e-07,2;UBERON:0002303,1.84e-07,2;UBERON:0002319,1.84e-07,2;UBERON:0005629,1.90e-07,2;UBERON:0005358,1.90e-07,2;UBERON:0001886,1.90e-07,2;UBERON:0004086,1.90e-07,2;UBERON:0005282,1.90e-07,2;UBERON:0005281,1.90e-07,2 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,1.0007329835313,0,0,2.53299878168311,0,0,0,0,0,0,0.495065411840187,1.98838425436749,0,0,0,0,0.861847406537515,2.04000691244253,1.56727360739044,0.572471974262113,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0.919421224478927,0,0,0.232401601740905,0,0,0,0,0,0.223915474239924,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,7.9409246417817,14.1906814376041,15.8102614247627,0.0654895377488563,0.728590576585084,1.48313777113772,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0,1.81628913173918,1.72852777344,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0.300091096084402,0,0,0,0,0,0.252433774244115,0.0920498986422993,0.484938170456436,0,0,0,0.966304265816484,0.545492241181669,0,0.365921118388786,0.397589304964456,1.04574548582567,0.829288440122964,1.00928340350251,1.82488679537915,0,1.28648187638577,0,0,0,0.236613600079688,0.168584690078102,0,0.441175890929576,0.435758888184812,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,1.96565443335525,0,0.441463099414651,0,51.4703430895577,0,0,0.201057944823262,0,0,0,20.2063878835383,8.46291956318061,2.46558257895225,0,0,0.190254152234598,0,0,0,0.468008530278475,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0.300343057843917,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0.266422179016099,0,1.08524321078289,1.64648067356154,0,0.355391948742546,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0.224170287987055,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0.36807447515742,1.00034104211935,0.271265023699736,0,0,0,0,0.300946099727719,4.5481500811197,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0,0,1.02341449813341,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0.902399225814824,0.308061348417659,2.35304930753057,24.8436681910543,0.844413031143006,0,0,0.215915916102139,0,1.35473218771926,4.01351819083883,0.254876273045038,0,8.73111543416495,0.219259876645935,0,1.02580050046556,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0.384380134730212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0.633322905892992,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,49.9936652876574,0,0.245040215981032,0,0,0.426851060090485,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.71623345421307,0.296964680832639,0.614321404198464,0,0.281338832821026,0,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.520855522170466,0.699679999969566,0,0.1137934482855,9.40738506083235,2.36387681767936,0,0,0,0,0.120596438625408,1.52581736317083,1.43753037910592,3.54657142744257,0.438770794307945,0,0.139423744278603,0.230850775511391,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,1.63232808159148,0.141353071433941,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,4.6525771089503,0.661983911750998,0.941798755221676,2.38944859545918,0,0,17.8766530485185,0.685946781900644,0,0.17472666824203,0.171986032471617,0,0.0730893170861856,0.0821154570532092,11.0567478796798,0.882561266915003,0,0,0,0.126621591911757,0.195551382734803,0.320635281006135,0,0.19980960958213,0,0,0,0,0.124252535565433,1.17847017308398,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0.803765742325096,0.137539436597234,1.24632101408756,0,0,0,1.0063040627978,0.0788057072991982,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0.170388021785422,0,0,0,0.646414781807753,0.26446520348538,0,1.40963004463334,0.427149650270779,0,0,0,0,0.365377795142688,0,0.544017803369474,0,0,0.327872630709804,0,0,0.122026264901963,0.250381861413,0,0.776503360757966,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0.214441591374926,0,0,0.231522474323834,0,0,4.32322026025361,0,0,0,0.168942440653073,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,1.24415452006595,5.88314107996798,0.646948868380091,0,0,0.169732529954025,0,0,0,0,0,0,0.352675943690684,0,0.128458450192919,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,4.1421595563606,0.397832444232549,0.0752103283492573,0.20170506870352,0,0,0,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0,0,0,0,1.53314913167514,0,0,0,0,0,0,0.171488009437418,0.951576261675644,0.131545547125698,0.354581522651905,0,0,0.157115589916002,0,0,0.215927591218621,0,0.214429632529969,0.632054446930906,0.929931402945002,0,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| |||
|short_description=p2@GCHFR | |||
}} |
Revision as of 23:02, 11 January 2014
Short description: | p2@GCHFR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GCHFR_5end |
Coexpression cluster: | NA |
Association with transcript: | 81bp_to_ENST00000558467_5end |
EntrezGene: | GCHFR |
HGNC: | 4194 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.74e-11 | 3 |
ciliated epithelial cell | 1.74e-11 | 3 |
multi-ciliated epithelial cell | 1.74e-11 | 3 |
non-pigmented ciliary epithelial cell | 1.74e-11 | 3 |
columnar/cuboidal epithelial cell | 1.70e-10 | 27 |
crystallin accumulating cell | 1.50e-08 | 4 |
vertebrate lens cell | 1.50e-08 | 4 |
lens epithelial cell | 1.50e-08 | 4 |
kidney tubule cell | 2.54e-08 | 10 |
nephron tubule epithelial cell | 2.54e-08 | 10 |
mesangial cell | 1.84e-07 | 2 |
kidney interstitial cell | 1.84e-07 | 2 |
juxtaglomerular complex cell | 1.84e-07 | 2 |
renal interstitial pericyte | 1.84e-07 | 2 |
extraglomerular mesangial cell | 1.84e-07 | 2 |
fibroblast of choroid plexus | 1.90e-07 | 2 |