FFCP PHASE1:Hg19::chr15:40669843..40669854,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C420 | |||
|description=CAGE_peak_at_chr15:40669843..40669854,- | |||
|id=chr15:40669843..40669854,- | |||
|ontology_enrichment_celltype=CL:0002573!7.68e-22!2;CL:0002591!8.86e-17!1;CL:0000243!7.87e-09!15;CL:0000125!7.87e-09!15;CL:0000030!7.87e-09!15;CL:0000339!7.87e-09!15;CL:0000095!5.88e-08!17;CL:0000123!5.88e-08!17;CL:0000188!1.17e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002573;1.28e-53;2!CL:0002591;2.21e-40;1!CL:0000243;2.04e-10;15!CL:0000125;2.04e-10;15!CL:0000095;1.99e-09;17!CL:0002319;6.43e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,1.28e-53,2;CL:0002591,3.30e-40,1;CL:0000243,2.04e-10,15;CL:0000125,2.04e-10,15;CL:0000030,2.04e-10,15;CL:0000339,2.04e-10,15;CL:0000095,1.99e-09,17;CL:0000123,1.99e-09,17;CL:0002319,6.43e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000339;2.04e-10;15!UBERON:0007123;3.22e-09;5 | |||
|ontology_enrichment_disease=DOID:4235!2.63e-16!1 | |||
|ontology_enrichment_disease_v019=DOID:4556;1.83e-14;3!DOID:3908;3.22e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,1.83e-14,3;DOID:3908,3.22e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0002046!2.85e-13!5;UBERON:0004117!2.85e-13!5;UBERON:0007689!2.85e-13!5;UBERON:0007123!2.85e-13!5;UBERON:0003091!2.85e-13!5;UBERON:0009722!3.21e-13!11;UBERON:0007690!3.21e-13!11;UBERON:0008814!7.44e-10!15;UBERON:0007497!4.70e-09!2;UBERON:0003643!4.70e-09!2;UBERON:0003504!4.70e-09!2;UBERON:0003469!4.70e-09!2;UBERON:0003496!4.70e-09!2;UBERON:0004797!4.70e-09!2;UBERON:0002012!4.70e-09!2;UBERON:0008886!4.70e-09!2;UBERON:0007303!4.70e-09!2;UBERON:0002061!4.70e-09!2;UBERON:0005432!4.70e-09!2;UBERON:0004363!4.70e-09!2;UBERON:0000010!6.55e-08!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;5.69e-21;2!UBERON:0002012;5.69e-21;2!UBERON:0008886;5.69e-21;2!UBERON:0000010;1.03e-18;8!UBERON:0002046;3.22e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,6.96e-21,2;UBERON:0007497,6.96e-21,2;UBERON:0003643,6.96e-21,2;UBERON:0003504,6.96e-21,2;UBERON:0003469,6.96e-21,2;UBERON:0003496,6.96e-21,2;UBERON:0002012,6.96e-21,2;UBERON:0008886,6.96e-21,2;UBERON:0007303,6.96e-21,2;UBERON:0002061,6.96e-21,2;UBERON:0005432,6.96e-21,2;UBERON:0004363,6.96e-21,2;UBERON:0000010,1.03e-18,8;UBERON:0009722,2.33e-15,11;UBERON:0007690,2.33e-15,11;UBERON:0004145,2.09e-14,3;UBERON:0008814,8.47e-10,18;UBERON:0002046,2.97e-09,5;UBERON:0004117,2.97e-09,5;UBERON:0007689,2.97e-09,5;UBERON:0007123,2.97e-09,5;UBERON:0003091,2.97e-09,5;UBERON:0003498,3.49e-09,5;UBERON:0005985,3.49e-09,5;UBERON:0010188,7.25e-08,6;UBERON:0002539,7.25e-08,6;UBERON:0003351,7.25e-08,6;UBERON:0008816,7.25e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307007349452259,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16160370171347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.1532640379894,5.79451152362272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34558235096736,0.25458863311266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:40669843..40669854,- | |||
}} |
Revision as of 23:01, 11 January 2014
Short description: | p@chr15:40669843..40669854, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:40669843..40669854, - |
Coexpression cluster: | C420_schwannoma_salivary_Mammary_skin_squamous_Smooth_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 1.28e-53 | 2 |
smooth muscle cell of the pulmonary artery | 3.30e-40 | 1 |
glial cell (sensu Vertebrata) | 2.04e-10 | 15 |
glial cell | 2.04e-10 | 15 |
glioblast | 2.04e-10 | 15 |
glioblast (sensu Vertebrata) | 2.04e-10 | 15 |
neuron associated cell | 1.99e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 1.99e-09 | 17 |
neural cell | 6.43e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 6.96e-21 | 2 |
developing epithelial placode | 6.96e-21 | 2 |
respiratory system arterial blood vessel | 6.96e-21 | 2 |
respiratory system blood vessel | 6.96e-21 | 2 |
respiratory system artery | 6.96e-21 | 2 |
head blood vessel | 6.96e-21 | 2 |
pulmonary artery | 6.96e-21 | 2 |
pulmonary vascular system | 6.96e-21 | 2 |
pharyngeal vasculature | 6.96e-21 | 2 |
truncus arteriosus | 6.96e-21 | 2 |
aortic sac | 6.96e-21 | 2 |
pharyngeal arch artery | 6.96e-21 | 2 |
peripheral nervous system | 1.03e-18 | 8 |
entire pharyngeal arch endoderm | 2.33e-15 | 11 |
early pharyngeal endoderm | 2.33e-15 | 11 |
outflow tract | 2.09e-14 | 3 |
pharyngeal arch system | 8.47e-10 | 18 |
thyroid gland | 2.97e-09 | 5 |
pharyngeal pouch | 2.97e-09 | 5 |
thyroid diverticulum | 2.97e-09 | 5 |
pharyngeal pouch 2 | 2.97e-09 | 5 |
thyroid primordium | 2.97e-09 | 5 |
heart blood vessel | 3.49e-09 | 5 |
coronary vessel | 3.49e-09 | 5 |
protuberance | 7.25e-08 | 6 |
pharyngeal arch | 7.25e-08 | 6 |
pharyngeal epithelium | 7.25e-08 | 6 |
embryonic head | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 1.83e-14 | 3 |
non-small cell lung carcinoma | 3.22e-09 | 5 |