FFCP PHASE1:Hg19::chr15:39534820..39534834,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3482 | |||
|description=CAGE_peak_at_chr15:39534820..39534834,+ | |||
|id=chr15:39534820..39534834,+ | |||
|ontology_enrichment_celltype=CL:0002620!2.33e-27!23;CL:0000057!1.15e-19!75;CL:0000055!2.25e-14!180;CL:0002371!2.86e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000346;1.01e-38;3!CL:1000428;1.01e-38;3!CL:0002580;3.19e-38;3!CL:0002559;1.02e-23;5!CL:0002615;1.04e-10;3!CL:0002334;2.24e-10;12!CL:1000306;1.70e-08;4!CL:0002547;1.70e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.01e-38,3;CL:1000428,1.01e-38,3;CL:0002580,2.18e-38,3;CL:0002559,1.02e-23,5;CL:0002615,1.20e-10,3;CL:0002334,2.03e-10,12;CL:1000306,1.70e-08,4;CL:0002547,1.70e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!4.80e-18!5;DOID:450!4.80e-18!5;DOID:66!4.80e-18!5;DOID:423!4.80e-18!5;DOID:0080000!4.80e-18!5;DOID:11722!4.80e-18!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002097!2.50e-19!40;UBERON:0002199!9.71e-17!45;UBERON:0002416!9.71e-17!45;UBERON:0003102!5.05e-09!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.01e-38;3!UBERON:0001992;1.01e-38;3!UBERON:0002073;1.02e-23;5!UBERON:0002067;1.15e-13;9!UBERON:0000310;2.98e-12;10!UBERON:0001443;3.13e-11;11!UBERON:0001003;1.37e-08;15!UBERON:0007376;1.37e-08;15!UBERON:0004797;1.70e-08;4!UBERON:0000415;1.70e-08;4!UBERON:0007240;1.70e-08;4!UBERON:0005742;1.70e-08;4!UBERON:0005734;1.70e-08;4!UBERON:0004664;1.70e-08;4!UBERON:0004663;1.70e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.01e-38,3;UBERON:0001992,1.01e-38,3;UBERON:0002073,1.02e-23,5;UBERON:0005086,1.02e-23,5;UBERON:0002067,1.15e-13,9;UBERON:0004016,1.15e-13,9;UBERON:0010083,1.15e-13,9;UBERON:0000310,2.66e-12,10;UBERON:0001443,2.83e-11,11;UBERON:0001003,1.37e-08,15;UBERON:0007376,1.37e-08,15;UBERON:0007383,1.37e-08,15;UBERON:0000415,1.70e-08,4;UBERON:0007240,1.70e-08,4;UBERON:0005742,1.70e-08,4;UBERON:0005734,1.70e-08,4;UBERON:0004664,1.70e-08,4;UBERON:0004663,1.70e-08,4;UBERON:0004923,2.29e-07,66 | |||
|phase1_expression=0.181678379270557,0,0,1.0007329835313,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.36950296683622,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0.612975591598039,0,0,0.89694817844431,0.85422955527427,0.211931901159562,0.300091096084402,0.309157587715317,0.257640540045629,0.37223371266318,0.506328996723799,0.487185025805993,0.504867548488229,0.828449087780694,0.161646056818812,0,0.705264687593482,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,3.12899064659632,0,2.76269842704961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671928512795438,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0.35142424497814,0,0,1.03473071292505,0,0.737476674166813,0,0,0,0,0,0,0,0,0,1.24053903909388,1.53461973288062,0,0.128139149255701,0,0.64341568457443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275673144969061,0,0,0,0,0.165284915360978,0,0,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:39534820..39534834,+ | |||
}} |
Revision as of 22:51, 11 January 2014
Short description: | p@chr15:39534820..39534834, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:39534820..39534834, + |
Coexpression cluster: | C3482_Fibroblast_Hair_Preadipocyte_Smooth_mesenchymal_Adipocyte_Keratocytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.01e-38 | 3 |
stem cell of epidermis | 1.01e-38 | 3 |
preadipocyte of the breast | 2.18e-38 | 3 |
hair follicle cell | 1.02e-23 | 5 |
adipocyte of omentum tissue | 1.20e-10 | 3 |
preadipocyte | 2.03e-10 | 12 |
fibroblast of tunica adventitia of artery | 1.70e-08 | 4 |
fibroblast of the aortic adventitia | 1.70e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.01e-38 | 3 |
papillary layer of dermis | 1.01e-38 | 3 |
hair follicle | 1.02e-23 | 5 |
hair follicle placode | 1.02e-23 | 5 |
dermis | 1.15e-13 | 9 |
dermatome | 1.15e-13 | 9 |
future dermis | 1.15e-13 | 9 |
breast | 2.66e-12 | 10 |
chest | 2.83e-11 | 11 |
skin epidermis | 1.37e-08 | 15 |
outer epithelium | 1.37e-08 | 15 |
enveloping layer of ectoderm | 1.37e-08 | 15 |
artery wall | 1.70e-08 | 4 |
tunica adventitia of artery | 1.70e-08 | 4 |
adventitia | 1.70e-08 | 4 |
tunica adventitia of blood vessel | 1.70e-08 | 4 |
aorta tunica adventitia | 1.70e-08 | 4 |
aorta wall | 1.70e-08 | 4 |
organ component layer | 2.29e-07 | 66 |