FFCP PHASE1:Hg19::chr15:33024966..33024984,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26585 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2001 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=219bp_to_AL359059_5end | |||
|coexpression_cluster_id=C316 | |||
|description=CAGE_peak_21_at_GREM1_5end | |||
|id=chr15:33024966..33024984,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.35e-20!180;CL:0000057!4.99e-18!75;CL:0002620!4.46e-14!23;CL:0002334!2.85e-12!12;CL:0000048!3.80e-12!430;CL:0000723!1.23e-11!436;CL:0000034!1.88e-11!444;CL:0002371!1.25e-08!591;CL:0002559!4.07e-08!4;CL:0002539!1.01e-07!10;CL:0000144!1.38e-07!625;CL:0002320!2.00e-07!365;CL:0000680!2.77e-07!57;CL:0000056!2.77e-07!57;CL:0000355!2.77e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002559;6.71e-15;5!CL:0000135;1.06e-14;3!CL:0000388;1.06e-14;3!CL:0000346;1.14e-14;3!CL:1000428;1.14e-14;3!CL:0002617;6.35e-10;2!CL:0000197;1.35e-07;6!CL:0000098;1.35e-07;6!CL:0002167;1.35e-07;6!CL:0002579;4.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002559,5.04e-15,5;CL:0000135,1.19e-14,3;CL:0000388,1.19e-14,3;CL:0000346,1.25e-14,3;CL:1000428,1.25e-14,3;CL:0000057,1.87e-11,76;CL:0002617,5.07e-10,2;CL:0000197,1.37e-07,6;CL:0000098,1.37e-07,6;CL:0002167,1.37e-07,6;CL:0002579,4.57e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!8.72e-10!14;DOID:17!3.49e-08!5;DOID:450!3.49e-08!5;DOID:66!3.49e-08!5;DOID:423!3.49e-08!5;DOID:0080000!3.49e-08!5;DOID:11722!3.49e-08!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!1.98e-13!45;UBERON:0002416!1.98e-13!45;UBERON:0002097!7.37e-13!40;UBERON:0000914!1.60e-11!83;UBERON:0002329!1.60e-11!83;UBERON:0003077!1.60e-11!83;UBERON:0003059!1.60e-11!83;UBERON:0007282!1.60e-11!83;UBERON:0009618!1.60e-11!83;UBERON:0007285!1.60e-11!83;UBERON:0005256!3.02e-10!143;UBERON:0003102!3.06e-10!95;UBERON:0003688!3.17e-10!6;UBERON:0002358!3.17e-10!6;UBERON:0003684!3.17e-10!6;UBERON:0001178!3.17e-10!6;UBERON:0004290!7.80e-10!70;UBERON:0002100!2.41e-09!216;UBERON:0001135!3.98e-09!15;UBERON:0000486!8.38e-09!82;UBERON:0004458!1.01e-08!49;UBERON:0000992!1.94e-08!13;UBERON:0002073!4.07e-08!4;UBERON:0005086!4.07e-08!4;UBERON:0000475!4.28e-08!365;UBERON:0002384!5.21e-08!375;UBERON:0004237!1.01e-07!10;UBERON:0004695!1.01e-07!10;UBERON:0002111!1.01e-07!10;UBERON:0004178!1.01e-07!10;UBERON:0002323!1.10e-07!46;UBERON:0004457!1.17e-07!12;UBERON:0000042!1.17e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002073;6.71e-15;5!UBERON:0007846;1.06e-14;3!UBERON:0000043;1.06e-14;3!UBERON:0007845;1.06e-14;3!UBERON:0000412;1.14e-14;3!UBERON:0001992;1.14e-14;3!UBERON:0003688;1.89e-07;6!UBERON:0002358;1.89e-07;6!UBERON:0003684;1.89e-07;6!UBERON:0001178;1.89e-07;6!UBERON:0002097;2.14e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002073,5.04e-15,5;UBERON:0005086,5.04e-15,5;UBERON:0007846,1.19e-14,3;UBERON:0000043,1.19e-14,3;UBERON:0007845,1.19e-14,3;UBERON:0000412,1.25e-14,3;UBERON:0001992,1.25e-14,3;UBERON:0002199,1.64e-09,46;UBERON:0002416,1.64e-09,46;UBERON:0002097,4.89e-09,41;UBERON:0003688,2.14e-07,6;UBERON:0002358,2.14e-07,6;UBERON:0003684,2.14e-07,6;UBERON:0001178,2.14e-07,6;UBERON:0003102,8.11e-07,99 | |||
|phase1_expression=1.45342703416445,2.5692062866918,0.563817616383885,2.00146596706261,0.893922188854576,0.872338524100369,0,0,0,0,0,0,0,0,1.32558950291166,3.36162573225888,0.602694528023977,2.19093027116212,2.43966399395253,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0,0.624320153660641,0,0.448346041655403,0,0,0.280901613404497,0,0.122834317311768,0,0,2.71993622206413,0,0,0,0,0,0,2.75839016219118,1.05166641234618,0,0.538168907066586,0.640672166455702,0.847727604638247,1.50045548042201,0.412210116953756,0,0.744467425326359,0.337552664482532,1.36411807225678,0.252433774244115,1.01254888506529,0,2.4850671476163,0.705264687593482,1.01736355386293,0,0,0,0,0,0,0.10366105501537,0,0,3.12899064659632,7.07565032012174,1.38134921352481,1.85747171212792,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,2.6593811658487,3.12022310734098,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0,0,1.42636905040718,0.868687840005475,0,1.07436577943937,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.49076596687656,0.500170521059677,0,0.831883446123229,4.28229573113188,2.05013139544115,2.6942525448324,0,0,0,0.664225598535437,0.184369168541703,0.347534457872331,0,0,0,0,0,0,0,0,0.992431231275107,0.61384789315225,2.24528075546459,1.40953064181271,0.511707249066704,6.4341568457443,0,1.23367755042124,0.710246901252508,0.164254312027618,0,0.581051892299796,0,0,0,0.229628896329213,0.910455840033585,0.524497659837696,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,6.42735719376638,0.096670718292122,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0.929691098594572,0.62962469366128,0,0,0.532306030317022,0,0,0,0,0,0.190630193923825,0,1.71175595213568,0,0,0.359744915166629,0.274537029736055,0.471249609382746,0,0,0,0,0.487426979262569,0,0.409499734223957,0.282810863907425,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0,0,0,0.35667105148125,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0435146396035,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.20599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947015026375446,0.251567901752575,0,0,0,0,1.47855149989634,0.63718706865481,0.449803112163605,0.465788870628778,0.829412415681711,2.12673371646396,0,0.150257608997218,0,0.406870733204662,1.63663793282303,0,2.32016879939247,0.796191777397232,0,0.686791410365586,1.34699795506368,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,1.41070377476274,0,0,0,0,0,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52934403219035,0,0,0,0,0,0,0,0,0.143339583151451,0.315543124386369,0,0,0,9.29987545416878,1.38652688589425,3.02838593486652,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p21@GREM1 | |||
}} |
Revision as of 22:40, 11 January 2014
Short description: | p21@GREM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_GREM1_5end |
Coexpression cluster: | C316_hepatic_Hair_Fibroblast_spindle_Preadipocyte_tenocyte_Ewing |
Association with transcript: | 219bp_to_AL359059_5end |
EntrezGene: | GREM1 |
HGNC: | 2001 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle cell | 5.04e-15 | 5 |
fibrocyte | 1.19e-14 | 3 |
tendon cell | 1.19e-14 | 3 |
hair follicle dermal papilla cell | 1.25e-14 | 3 |
stem cell of epidermis | 1.25e-14 | 3 |
fibroblast | 1.87e-11 | 76 |
adipocyte of breast | 5.07e-10 | 2 |
receptor cell | 1.37e-07 | 6 |
sensory epithelial cell | 1.37e-07 | 6 |
olfactory epithelial cell | 1.37e-07 | 6 |
omentum preadipocyte | 4.57e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hair follicle | 5.04e-15 | 5 |
hair follicle placode | 5.04e-15 | 5 |
dense regular connective tissue | 1.19e-14 | 3 |
tendon | 1.19e-14 | 3 |
regular connective tissue | 1.19e-14 | 3 |
dermal papilla | 1.25e-14 | 3 |
papillary layer of dermis | 1.25e-14 | 3 |
integument | 1.64e-09 | 46 |
integumental system | 1.64e-09 | 46 |
skin of body | 4.89e-09 | 41 |
omentum | 2.14e-07 | 6 |
peritoneum | 2.14e-07 | 6 |
abdominal cavity | 2.14e-07 | 6 |
visceral peritoneum | 2.14e-07 | 6 |
surface structure | 8.11e-07 | 99 |