FFCP PHASE1:Hg19::chr14:97263676..97263764,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7443 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12718 | |||
|TSSclassifier=strong | |||
|UniProt=Q99986 | |||
|association_with_transcript=0bp_to_ENST00000555351,NM_003384,uc001yft.2_5end | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_1_at_VRK1_5end | |||
|id=chr14:97263676..97263764,+ | |||
|ontology_enrichment_celltype=CL:0000542!4.44e-18!53;CL:0000051!4.44e-18!53;CL:0000838!1.64e-17!52;CL:0000037!1.76e-12!172;CL:0000566!1.76e-12!172;CL:0002032!3.32e-11!165;CL:0000837!3.32e-11!165;CL:0000988!8.58e-11!182;CL:0000945!3.27e-10!24;CL:0000826!3.27e-10!24;CL:0000084!9.94e-09!25;CL:0000827!9.94e-09!25 | |||
|ontology_enrichment_celltype_v019=CL:0000542;6.97e-11;53!CL:0000945;3.16e-10;24!CL:0000084;1.11e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.44e-18,53;CL:0000051,4.44e-18,53;CL:0000838,1.64e-17,52;CL:0000037,4.86e-12,168;CL:0002032,8.84e-11,161;CL:0000837,8.84e-11,161;CL:0000988,1.08e-10,177;CL:0000945,3.27e-10,24;CL:0000826,3.27e-10,24;CL:0000084,9.94e-09,25;CL:0000827,9.94e-09,25 | |||
|ontology_enrichment_development_v019=CL:0000051;6.97e-11;53 | |||
|ontology_enrichment_disease=DOID:162!1.59e-36!235;DOID:14566!7.06e-35!239;DOID:2531!8.38e-27!51;DOID:0060083!8.38e-27!51;DOID:1240!6.18e-23!39;DOID:0050686!4.71e-20!137;DOID:8692!3.78e-18!31;DOID:0050687!7.10e-15!143;DOID:305!4.50e-13!106;DOID:0060058!9.38e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:1240;6.43e-18;39!DOID:8692;1.43e-17;31!DOID:2531;1.67e-16;51!DOID:0060083;1.67e-16;51!DOID:0060058;9.42e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.59e-36,235;DOID:14566,7.06e-35,239;DOID:2531,8.38e-27,51;DOID:0060083,8.38e-27,51;DOID:1240,6.18e-23,39;DOID:0050686,4.71e-20,137;DOID:8692,3.78e-18,31;DOID:0050687,7.10e-15,143;DOID:305,4.50e-13,106;DOID:0060058,9.38e-07,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@VRK1 | |||
}} |
Revision as of 21:49, 11 January 2014
Short description: | p1@VRK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VRK1_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000555351, NM_003384, uc001yft.2_5end |
EntrezGene: | VRK1 |
HGNC: | 12718 |
UniProt: | Q99986 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.44e-18 | 53 |
common lymphoid progenitor | 4.44e-18 | 53 |
lymphoid lineage restricted progenitor cell | 1.64e-17 | 52 |
hematopoietic stem cell | 4.86e-12 | 168 |
hematopoietic oligopotent progenitor cell | 8.84e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.84e-11 | 161 |
hematopoietic cell | 1.08e-10 | 177 |
lymphocyte of B lineage | 3.27e-10 | 24 |
pro-B cell | 3.27e-10 | 24 |
T cell | 9.94e-09 | 25 |
pro-T cell | 9.94e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.59e-36 | 235 |
disease of cellular proliferation | 7.06e-35 | 239 |
hematologic cancer | 8.38e-27 | 51 |
immune system cancer | 8.38e-27 | 51 |
leukemia | 6.18e-23 | 39 |
organ system cancer | 4.71e-20 | 137 |
myeloid leukemia | 3.78e-18 | 31 |
cell type cancer | 7.10e-15 | 143 |
carcinoma | 4.50e-13 | 106 |
lymphoma | 9.38e-07 | 10 |