FFCP PHASE1:Hg19::chr14:69350920..69350944,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=87 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=163 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=67bp_to_ENST00000556343_5end | |||
|description=CAGE_peak_5_at_ACTN1_5end | |||
|id=chr14:69350920..69350944,- | |||
|ontology_enrichment_celltype=CL:0000144!1.01e-16!625;CL:0000548!2.83e-16!679;CL:0000004!2.83e-16!679;CL:0000255!2.83e-16!679;CL:0002321!4.69e-16!248;CL:0000220!5.00e-16!246;CL:0000055!9.05e-16!180;CL:0000012!2.35e-15!682;CL:0002371!3.96e-15!591;CL:0000003!4.12e-10!722;CL:0000057!9.15e-10!75;CL:0000222!9.91e-10!119;CL:0000066!1.54e-09!254;CL:0000192!1.79e-07!42;CL:0000514!1.79e-07!42;CL:0000063!3.76e-07!578;CL:0000183!6.82e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.56e-11,76;CL:0002321,1.01e-10,250;CL:0000192,7.17e-08,43;CL:0000514,7.17e-08,43;CL:0000222,1.73e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!5.57e-11!143;UBERON:0000468!5.70e-11!659;UBERON:0002049!8.74e-11!79;UBERON:0007798!8.74e-11!79;UBERON:0003914!2.35e-10!118;UBERON:0004535!3.24e-10!110;UBERON:0001009!1.09e-09!113;UBERON:0003102!1.25e-09!95;UBERON:0000467!2.24e-09!625;UBERON:0000480!3.77e-09!626;UBERON:0001981!4.12e-09!60;UBERON:0007500!4.12e-09!60;UBERON:0004537!4.12e-09!60;UBERON:0006965!4.12e-09!60;UBERON:0004872!8.61e-09!84;UBERON:0001637!1.17e-08!42;UBERON:0003509!1.17e-08!42;UBERON:0004572!1.17e-08!42;UBERON:0000055!2.69e-08!69;UBERON:0002100!5.82e-08!216;UBERON:0002097!2.68e-07!40;UBERON:0000490!3.08e-07!138;UBERON:0000926!3.37e-07!448;UBERON:0004120!3.37e-07!448;UBERON:0006603!3.37e-07!448;UBERON:0002199!3.37e-07!45;UBERON:0002416!3.37e-07!45;UBERON:0000475!7.85e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.71e-08;42!UBERON:0003509;3.71e-08;42!UBERON:0004572;3.71e-08;42!UBERON:0002097;2.28e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,6.46e-11,99;UBERON:0002049,1.95e-10,78;UBERON:0007798,1.95e-10,78;UBERON:0001637,2.01e-10,42;UBERON:0003509,2.01e-10,42;UBERON:0004572,2.01e-10,42;UBERON:0002199,1.47e-09,46;UBERON:0002416,1.47e-09,46;UBERON:0002097,2.18e-09,41;UBERON:0007500,1.08e-08,59;UBERON:0001981,1.08e-08,59;UBERON:0004537,1.08e-08,59;UBERON:0006965,1.08e-08,59;UBERON:0004535,3.69e-08,109;UBERON:0000055,5.93e-08,68;UBERON:0001009,1.52e-07,112;UBERON:0003914,2.07e-07,117;UBERON:0004872,2.89e-07,83;UBERON:0005085,7.59e-07,31 | |||
|phase1_expression=1.45342703416445,4.06790995392868,1.69145284915165,3.00219895059391,2.68176656656373,0,0,1.26343974685366,0.261185628199839,2.45733936501509,2.79120467188971,2.83973783769224,1.31883489114227,0.618831764800233,0,0.672325146451775,1.80808358407193,0.730310090387373,1.95173119516203,2.33930010345897,2.85600967741954,2.19418305034661,2.0036519099174,2.18999080116615,1.63205431473244,0.152826811495903,0.57470412614962,0.787107813136792,0,0,0.309632246632152,0,1.204823675113,2.21852406100073,0,0,0,0,0,0.434021741431704,0,0,0,0.872389432677388,0.377875943688809,0.485168122375632,0.929716147622738,2.05583944010913,0.929119112685311,1.1507695692886,1.5369642391746,0.236482229888585,1.03423704220986,0,0,0.376484679085209,0.818718450173537,0.674170453335254,0.306083892370903,0.320929027076094,1.27867425159808,1.31940520074686,1.19678194572979,0.852449501065388,1.16083695451434,0.56738522469114,0,0.251248665256743,1.5644487552606,0.434377689410233,0.605399502633369,0,0,0,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.403213486449465,0,0,0,0,0.767175371061182,0,1.00267582127178,1.15877215168659,1.5905718941022,0,1.03988298880475,1.33037638477538,2.45937399940753,0.261958150995425,2.5500670180478,1.11235332835329,0.649094787309367,0.522389211897802,1.32957960518865,0,0,0,1.19257444420023,0.860234595106124,0.347140501607594,1.13061588384802,1.25849830862972,2.75118041940067,1.67195973229448,0.775250277507987,0.71153252537342,0.33472061276467,1.61131726843659,1.52054421143703,1.95249646038536,1.47065232138347,5.67099363517232,0.892997282840798,0.22452937262617,0.112611480483322,0,0.949265659568129,0.732806975721629,0,0,1.74437620857014,1.98788780678127,1.51956613997496,1.05927344650575,2.58152958673932,0.354668382198357,1.68203280042692,3.20246987189115,4.19334832309172,0.311211035399766,0.942974704487816,0.817309515567294,1.36221684880438,1.72852777344,0.937285727335186,0.624320153660641,0,0.747243402759005,1.17434498643765,0.485618833104395,0,0.61246251376468,0.737005903870608,0.309977343527296,1.18800285728205,2.47266929278557,0,1.43723628363248,0.505008341862199,1.50142223846357,1.6623846929051,0.438977620880838,3.0648779579902,0.751190294532984,1.24775401476023,5.202299434977,3.63047560991565,1.69545520927649,2.10063767259082,1.54578793857658,4.12224864073007,2.60563598864226,2.53164498361899,3.02054715999716,2.01947019395292,2.30124746605748,2.42469085228218,2.84007674013291,2.82105875037393,2.54340888465731,0.966304265816484,2.45471508531751,0.573609190778008,0.609868530647977,0.662648841607426,0.813357600086629,0.310983165046111,0.504641701751257,0,3.12899064659632,4.5026865673502,2.76269842704961,3.25057549622385,0.721879481669586,1.18306800039844,0.505754070234305,0.241011029883482,1.10293972732394,0.435758888184812,1.18635309555548,0,0.784885860501384,0.38474715694639,2.21446636387394,4.20725321410337,0,2.94017422771084,0,0.982827216677626,0,0,0.491953754172454,1.71567810298526,5.92651541206578,3.37205259772859,2.81481122752566,2.22212268380471,0.651616610620649,1.03993478527958,4.3299402607582,0.463721619900307,1.17408694235822,2.45422961193825,0,1.90254152234598,0.790204397959275,0,0.246217006087397,0.702012795417713,0.297262324577456,1.87467667973554,3.02367830757947,2.1266264586358,1.79117045405697,2.61570544662566,4.21720947081732,0,0,0,0,0,0.190493682876507,1.52795370223311,1.17217447210047,5.13217338068116,0.719792448923265,0.901029173531752,0,1.79409734952577,0.87192013766656,2.4935017179123,1.55126058909333,0,0.845302752556,3.19125739901845,3.12022310734098,1.28603687131071,0,1.3321108950805,2.28764789853036,0,0.823240336780769,0.65147236858747,1.77695974371273,0.791951872933429,0.904318131178758,0,3.19913571782583,0,0.502257091432126,0,5.27174682081482,3.44585807502342,0,1.15825045334063,1.43833425785268,0.537182889719687,0,0.197030760201927,0,0,0.76228387266739,0,0.773288812777695,1.00509759200609,0.637938751653163,0.749007023947182,5.9832291840805,1.65766205374414,1.2269149171914,0.500170521059677,0.542530047399471,6.44709670745502,7.85087550707512,3.31175071571263,1.99140405487612,0.902838299183157,0,2.0694614258501,0.664225598535437,1.29058417979192,1.73767228936166,0.783204629850962,0.686286847621712,0.206768026122887,0.431428401637234,0,0.909382714338778,3.32870879020994,1.81434175997808,1.73675465473144,3.37616341233737,3.64858122762996,1.79394808957981,3.07024349440022,1.93024705372329,0,2.15893571323718,1.42049380250502,1.47828880824856,1.55776328755086,1.27831416305955,0.604297247958111,6.01519410909855,0.736647911487171,1.37777337797528,2.91345868810747,2.49136388422906,0.902399225814824,3.00359814707218,1.56869953835371,1.46139224653261,3.0609972378934,0,1.02056223165909,0.647747748306418,1.54227252690289,2.98041081298238,2.50844886927427,0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| |||
|short_description=p5@ACTN1 | |||
}} |
Revision as of 20:46, 11 January 2014
Short description: | p5@ACTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ACTN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 67bp_to_ENST00000556343_5end |
EntrezGene: | ACTN1 |
HGNC: | 163 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.56e-11 | 76 |
embryonic cell | 1.01e-10 | 250 |
smooth muscle cell | 7.17e-08 | 43 |
smooth muscle myoblast | 7.17e-08 | 43 |
mesodermal cell | 1.73e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
surface structure | 6.46e-11 | 99 |
vasculature | 1.95e-10 | 78 |
vascular system | 1.95e-10 | 78 |
artery | 2.01e-10 | 42 |
arterial blood vessel | 2.01e-10 | 42 |
arterial system | 2.01e-10 | 42 |
integument | 1.47e-09 | 46 |
integumental system | 1.47e-09 | 46 |
skin of body | 2.18e-09 | 41 |
epithelial tube open at both ends | 1.08e-08 | 59 |
blood vessel | 1.08e-08 | 59 |
blood vasculature | 1.08e-08 | 59 |
vascular cord | 1.08e-08 | 59 |
cardiovascular system | 3.69e-08 | 109 |
vessel | 5.93e-08 | 68 |
circulatory system | 1.52e-07 | 112 |
epithelial tube | 2.07e-07 | 117 |
splanchnic layer of lateral plate mesoderm | 2.89e-07 | 83 |
ectodermal placode | 7.59e-07 | 31 |