FFCP PHASE1:Hg19::chr14:50065639..50065674,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=122769 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19742 | |||
|TSSclassifier=strong | |||
|UniProt=Q6P393 | |||
|association_with_transcript=0bp_to_ENST00000540712_5end | |||
|description=CAGE_peak_1_at_LRR1_5end | |||
|id=chr14:50065639..50065674,+ | |||
|ontology_enrichment_celltype=CL:0000012!1.00e-17!682;CL:0000548!2.79e-17!679;CL:0000004!2.79e-17!679;CL:0000255!2.79e-17!679;CL:0000003!1.01e-13!722;CL:0000063!8.86e-11!578;CL:0000144!1.19e-07!625;CL:0000066!3.71e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.19e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.01e-18!235;DOID:14566!8.56e-18!239;DOID:0050687!9.09e-10!143;DOID:0050686!1.28e-08!137;DOID:305!5.73e-08!106;DOID:2531!5.74e-08!51;DOID:0060083!5.74e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.98e-18,235;DOID:14566,8.45e-18,239;DOID:0050687,9.02e-10,143;DOID:0050686,1.31e-08,137;DOID:2531,5.72e-08,51;DOID:0060083,5.72e-08,51;DOID:305,5.89e-08,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=4.36028110249336,2.99740733447376,2.67813367782345,1.0007329835313,3.5756887554183,0.872338524100369,0,0.631719873426831,3.13422753839806,9.82935746006035,4.88460817580699,5.67947567538448,4.22027165165526,1.60896258848061,1.98838425436749,3.36162573225888,3.01347264011988,1.46062018077475,0.975865597581014,8.74159512345194,9.38403179723564,2.82109249330279,10.8769675109802,15.1930611830901,13.3075197970491,6.18948586558405,7.7174554082949,7.79236735005425,4.32700704533794,4.98978217526377,5.72819656269481,5.51652734687356,6.92773613189975,1.47901604066715,3.56349122669387,5.68676929949686,7.63361142270603,4.43196326825502,2.4065333696417,2.82114131930607,3.35873211359887,2.26725566213286,4.37878464978117,1.59938062657521,2.26725566213286,2.18325655069035,1.62700325833979,1.23350366406548,2.16794459626573,1.7261543539329,3.33008918487831,3.54723344832878,2.06847408441971,0,2.70852973188684,1.88242339542605,1.36453075028923,2.24723484445085,1.53041946185451,1.92557416245656,4.47535988059329,1.64925650093358,2.59302754908121,3.40979800426155,1.7412554317715,1.70215567407342,1.86846674698672,4.01997864410789,3.65038042894141,4.99534342821768,2.42159801053347,0,0.949387162322653,5.28138215779854,6.16552469898626,5.2414661377094,6.29040334420373,4.35512989240368,3.2145117339416,10.8304842621674,7.16100037916724,6.02791707423292,3.51992488922645,3.27683166757279,0,3.41384178053206,4.00395987036012,4.02326707968138,3.30522436392431,5.72432252721218,3.41527781465669,0.587237189370939,1.91136614062614,3.96513985737078,3.92355994087075,10.0085952214529,6.68813218387032,4.71612915298998,4.93443597598822,6.52027332023645,4.88883399950386,7.101717086021,3.89653456815823,5.45911238737351,6.77593587192126,7.3106185212595,3.5204502289452,5.76410938765538,3.90178042679635,6.74195408875072,4.69795030235942,7.24507714337631,5.19002971067211,4.28065324943541,1.04535523804977,7.13848858994667,6.51474839123266,5.15441168223945,1.77113784413652,4.77848121486145,3.25541726928209,5.70271226669025,4.51725357233318,3.96758494578697,8.74515085866421,5.20909954496837,6.56902397536837,6.04820229674197,4.81392352410313,5.79297615531196,2.43806866313962,4.02420515822182,6.26526553033299,6.50590474292219,1.50401373190767,2.75208386025565,3.9764297352555,2.91980922181582,6.90104165297695,3.76939975686359,5.70926107005319,3.40545596294053,4.00724817121796,11.1235332835329,0.649094787309367,3.83085422058388,3.58986493400936,6.91622810485492,9.15191857248205,11.5151825412165,8.34802110940161,5.16140757063675,5.55424802572151,6.78369530308812,7.55098985177831,7.15306909044175,8.56879362800923,4.39308490587859,3.5576626268671,5.02080919147005,2.41697590265488,3.80136052859256,4.14905497831888,6.98559852657151,1.62028389576352,13.484258970896,9.20570427767296,11.3737595288155,10.7321646226118,7.59412527654503,5.86245580577303,0,0,4.36094052142534,3.97577561356255,5.44511200157693,2.64818361626438,3.72887606973458,8.51204117276057,3.36406560085384,2.1349799145941,3.20667812942308,5.60179863719579,7.40908696383284,8.17309515567294,3.93529311876822,2.88087962239999,3.28050004567315,7.49184184392769,9.12754914471119,6.42629326372745,16.4408298101271,19.5866262685439,21.0676210053373,4.69554593886255,12.7747690004239,2.47981874821837,5.94001428641027,0.989067717114227,8.19145225744224,3.59309070908119,17.5069558512229,11.0104297487328,5.54128230968366,6.58466431321257,4.59731693698529,4.35690370829131,10.549193033882,4.48474089222155,3.20336083227851,1.48352330811693,5.40163972951924,4.12210116953756,2.06112432036503,3.16398655763703,6.91982962189192,5.84622030967192,3.02920529092937,3.03764665519588,2.42469085228218,2.4850671476163,8.46317625112178,6.44330250779853,3.28543450377605,2.18196896472668,3.15485054927904,12.5632917313483,10.2047921607544,8.8307396580834,9.1221728413526,8.83122978064699,9.85438869504741,0,3.21620469096443,8.28809528114883,1.39310378409594,2.16563844500876,13.1320548044227,10.6208354749204,13.2556066435915,14.7793923461408,10.0224544282507,11.8635309555548,13.7527934323368,10.0072947213927,11.5424147083917,9.59602091012043,2.80483547606892,6.9967581926338,5.88034845542168,1.26755034821831,1.96565443335525,1.18157981336281,11.0365774853663,8.73217913656106,2.57351715447788,1.86575485194663,3.37205259772859,12.6666505238655,3.61094936118265,6.19035780089617,12.4792174233549,2.88662684050547,7.53547632337999,2.34817388471643,3.3204282985047,6.94478268864916,3.42457474022277,14.223679163267,10.3018339451385,4.18568910348575,3.51006397708857,4.90482835552803,7.49870671894216,3.35964256397719,3.68615252830205,7.88114999785065,9.30028603244678,13.8017764499476,8.86793828212698,5.37095447480679,4.76854665743776,5.6206781832615,3.1560608356595,9.58818203811752,4.58386110669933,7.03304683260282,6.84289784090821,12.0308166462889,6.60754727256618,3.42991719156694,9.64327325370102,5.23152082599936,11.1474194447844,3.23179289394444,0,14.370146793452,3.98907174877306,3.12022310734098,11.3171244675343,15.6034045225606,11.9889980557245,3.86040582876998,2.17048642156577,6.58592269424615,19.2184348733304,4.97548728239564,11.8792780940014,3.91871190177462,1.74306691720059,2.7992437530976,6.08118903205952,4.01805673145701,2.10833939483032,5.27174682081482,5.7430967917057,5.70547620162874,5.50168965336801,3.28762116080613,9.84835297819426,7.95804522354044,5.31983052545203,5.60631694634745,3.46526197955321,5.33598710867173,1.30139853857622,2.31986643833309,4.52293916402742,3.18969375826582,0,5.9832291840805,0.828831026872071,1.10422342547226,0.500170521059677,3.52644530809656,2.70362119990049,3.56857977594324,1.73472656537328,2.10854546986884,2.70851489754947,0,4.1389228517002,9.96338397803155,9.21845842708516,4.43106433787223,1.95801157462741,3.43143423810856,2.89475236572042,4.09856981555372,4.37582986994122,12.7313580007429,1.66435439510497,7.25736703991233,1.24053903909388,1.99500565274481,3.92924132206303,2.56278298511402,1.53512174720011,3.05622450172854,0,10.7946785661859,9.05564799096948,9.19824147354662,2.59627214591811,9.29683027679674,7.13070752590571,2.20557117333613,3.22283461275637,7.11849578620562,6.91946438425525,2.49136388422906,6.31679458070376,5.2370429231002,8.62784746094541,0,3.79985864014353,9.09867072567173,4.59253004246592,10.1480480568005,0,5.41892875087706,4.01351819083883,8.41091701048626,7.47968408035852,10.5221134719424,33.546761126828,36.0780922414363,12.8225062558195,2.95213181129735,2.60302715731442,1.64865618636356,16.1162258080284,12.1288964883264,4.59412430396938,1.30012049207304,3.21367859688319,1.83674364755032,14.1724727745473,13.047812351721,18.7457738578962,4.51165028446749,6.67076792005451,16.3635124638914,3.47224939022276,3.14041339185858,2.11409074101617,4.33883222481586,3.4393645490887,1.85938219718914,1.25924938732256,6.2733354314454,2.46426864140871,5.85536633348724,2.60979897622522,2.22389062924704,4.00749682877575,7.07100901783368,4.74569137078089,4.5751246541718,14.3302763134347,3.85145089230528,5.40945521474092,3.92474320099615,5.03642881233281,9.33425901102586,10.0140541993833,3.03273722359974,0,7.58265221230166,6.82687234725426,4.38684281336312,5.28250733783777,5.7329962791354,3.67654123079653,0,2.75682671773062,1.99031692572366,2.63070531152258,1.15755106853338,3.27947376023316,2.63783490051515,7.74558745249375,7.32408566583828,11.7597308807322,4.91245205065606,1.78335525740625,13.4809204346827,2.74439925886963,2.96365403663912,7.96893664908002,2.44954304171488,4.04132873447151,10.0545341330368,5.44454924306613,1.7887322147588,3.01353760869861,8.42357378338128,3.54744122829341,3.44585100310439,6.08937131078603,2.29391162142713,3.98753031021914,1.66762242820452,1.64544909234478,1.94541993357815,2.16012574895246,3.17250070517708,9.40051825921764,0.962479855263359,7.35120647943095,6.13150477914872,12.4071523159743,7.89674461167397,10.8409865455599,6.78569862871576,9.00075239622124,2.54008299268659,8.44017044713844,5.05434920604226,3.42352018549788,14.5712303068912,5.01268954180134,5.75592044525451,7.38705145477018,10.0899853595524,3.40676990152261,5.49608551609224,12.5968713366468,12.9732142577601,9.8440993610026,11.5278976287204,10.301028434124,8.61611792633986,7.03184764037556,3.66379164797602,11.278960407028,3.36852972734796,4.54175355742871,5.21850243522908,7.91248028370096,12.7861266062886,3.34242278632766,6.23625829748541,2.15012491469462,1.9882952955326,0.984685914873589,3.00533503561846,12.6898983154605,6.96713846822378,2.59022384726391,1.93398740871803,3.77899121781414,8.99964406018962,5.6619010512092,3.73247505194169,7.54894149637545,8.05595286040241,5.62729607249559,4.34030984802508,2.3948309234694,5.55684950723184,0,1.39152147242777,3.99227596002388,4.16684417736373,8.74599999961957,1.44999915086959,15.3621155185425,13.2211898152238,7.56440581657396,9.99755782400247,11.3725799219469,8.68124974666461,0.885741385813839,0.964771509003264,3.05163472634166,2.21158519862449,1.77328571372128,0.87754158861589,7.18993859225335,5.29810228258692,2.84715956464049,2.50672522863403,9.68368398429853,8.43721857451858,5.86695808378844,3.19001159731919,7.32780747214898,2.66517388009317,7.15353087370155,4.55242743545572,3.98908036560375,3.60953056987489,4.90156335794349,4.53118284834775,7.77990304169159,5.88065342227401,7.59593032300897,5.22344986109273,6.78494742882916,6.70804783200482,2.98578579323551,3.62676014463691,1.22206028986725,5.93042257361244,5.06612149680662,7.30953646538188,1.95463285643963,0,0.702793337176017,5.29118888725431,5.86993856796269,1.69946265673865,0.394584402849391,1.20990716048664,1.22429104652196,4.61262031287962,8.86908174545506,5.59916233545135,7.31119259977904,5.29587129400798,7.22045712336618,8.36307008410712,4.55375273647668,6.37903495860438,3.29763502836749,7.74139939573583,11.5788744751935,1.57254001417827,4.29965081179041,10.256171116643,10.1594150749798,11.6603949015557,3.29762656060626,2.29465929397901,0.677942222341597,10.5522281977998,14.5061666543182,0.759729551470544,7.23540116118771,2.16428814679141,2.34798294213288,3.59657297247834,6.91634002339709,6.64312257762311,7.89336990165037,6.62652070745489,3.60332353139754,4.9495747269527,4.89255141865011,5.96236223980299,5.6099019699977,4.04530825862126,0.600420288709789,1.9166753044879,20.4394540907156,1.28929632425987,8.14950798265875,2.23425921017803,2.29160424011684,5.0251111720377,3.79390100948083,2.57535628881943,7.36465809558179,3.8294579317434,1.80149941771202,3.49487848582361,4.6482077561262,4.78011978610765,3.70719491198017,4.82294659422269,16.5959730848938,0,1.36203406111576,13.0210050256666,8.80252394222296,10.8014487887588,4.49947783103001,3.0952078182318,0.668245123238271,2.68347750079413,2.60058834087354,2.7800931711549,3.69601177817923,3.5857467866569,10.36342065525,4.2881719582402,2.64836788146173,9.91647296853524,1.62899880526114,5.18532894720761,4.24563568142232,5.98650957812437,7.71669695043786,4.08931252285012,9.97146405377106,2.19828350517124,7.95041333473328,0.775697738169303,1.85125642439766,5.30369197441421,0.704815022316672,4.27149650270779,1.57204305099666,1.65695622138878,4.46549419630756,6.12596058883627,4.87170393523584,8.93677760878255,5.98419583706421,3.5096585163178,5.51422038174231,5.24596209135687,1.41348686625211,0,0.732157589411779,1.8778639605975,1.72022758707021,1.99672292766334,1.4903136705932,9.26935854072747,8.87360896530957,5.00442087887438,2.85465333544967,5.64637967275612,9.36669811613763,7.53589348776291,7.91050455300432,2.57084640831947,3.32883516901568,3.03044808440143,4.77979013329893,0,2.51724075236616,4.38569678913393,7.30554842739068,7.54061264947133,4.93819978207477,0.449803112163605,5.58946644754534,4.14706207840855,5.3168342911599,2.60872530905867,2.85489457094715,3.42724690951916,6.10306099806992,5.27361111687422,3.54454838240212,2.78420255927096,5.17524655308201,8.40058305792623,3.09056134664514,3.36749488765919,3.78554694685953,8.09003287710674,4.93215660162329,6.52485729913029,10.6551784990768,3.24131464053368,3.91578727210348,8.95444205407437,7.41123473186333,6.79780553693992,8.30438985945641,6.36616326294019,4.22356101632682,5.63731340893483,8.98118888501116,5.46947921119288,1.52084279766904,7.20983142705737,4.38453973034098,5.07052722193117,5.56936743038901,15.4836932514843,7.18461219419332,9.99936979274649,9.60225567247268,5.5108793491461,7.9452233499357,8.28476776133283,3.07734916982778,4.97661808026378,7.54576790691545,6.90078792938764,3.30258477897382,3.82233733672049,8.82609155760931,3.40119872162693,5.4531736273961,8.9383186875719,3.81605220784102,6.78211007010779,18.4131272105658,1.76337971845342,3.062454773532,0.770750701157514,4.25089728976755,2.87340946302872,0.41023272848151,1.26035848110859,0.691572524642179,1.29180516505481,0,1.57036349601641,13.0946392915992,6.60342954678044,8.66442496127537,4.19520305013884,17.9493580775626,4.37615688655804,2.78278214892252,7.46308754203024,6.25211208986474,5.23813388962845,2.78412259767164,4.28782650029431,1.2832141077495,0,1.2401207790071,0.824405532520789,2.18789923607288,0,4.46590060550365,2.63806866539431,8.0490329412945,1.07140367175657,2.01770233331294,1.82089681270989,1.59363533945908,3.28198769601764,9.67965495468546,2.7438081509987,1.2914249265598,0.986591603442736,29.0756848574562,13.7926938346166,1.56986185701028,1.41404030924402,5.32517110296199,1.82631744101899,3.23891386827932,3.8220135030964,3.64530375300947,5.21444918717998,10.8104525592356,8.86677188743155,0,3.31545862660859,4.26796192734875,2.76503864725637,2.58136415292167,4.14162002556979,3.8346032141621,2.54032230114557,7.10231292486555,2.17144469965024,6.68877257284203,1.34226518157351,4.1223098118402,5.24247077423759,7.12171720906684,3.69586104682489,1.1598144313382,1.45713297917742,11.9309126365674,3.18321240258189,5.11356390343545,5.19551977379216,3.62803705259916,4.98177383770023,3.70435958918134,3.27839340755936,6.1141248526998,2.69663153929296,1.17838273550813,1.17785080268967,2.97046400327086,2.5359343655004,5.94744901407359,5.63903507879122,5.28554681383333,3.59788161329744,5.53517209677539,4.94052820401969,3.61086150101257,5.84269110597214,3.21110498383179,1.72007499781742,7.41526342307968,1.08786384305464,0,3.7031878836078,4.46394021800102,2.31087814315709,3.8936390591141,7.31765264043458,7.97638675334977,13.1766441051894,9.07700584703638,0.534434810531121,4.5028500772074,1.75495277504663,8.2598781057881,6.16317499359211,4.1458471972939,1.55149493792843,2.55880778281177,2.61870874610114,9.36539192622089,8.81460943001182,8.29775783096539,2.48223917284843,2.22328907854041,3.9189014621453,2.73786640868225,3.70436291580231,3.01233262649241,0.665320713092027,8.54734320415232,4.69600321861948,13.5150597600858,1.97615444634491,0,2.44482888365733,2.03448089157869,3.32878387092756,2.61655931668334,4.80852738454849 | |||
|short_description=p1@LRR1 | |||
}} |
Revision as of 19:57, 11 January 2014
Short description: | p1@LRR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LRR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000540712_5end |
EntrezGene: | LRR1 |
HGNC: | 19742 |
UniProt: | Q6P393 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.19e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.98e-18 | 235 |
disease of cellular proliferation | 8.45e-18 | 239 |
cell type cancer | 9.02e-10 | 143 |
organ system cancer | 1.31e-08 | 137 |
hematologic cancer | 5.72e-08 | 51 |
immune system cancer | 5.72e-08 | 51 |
carcinoma | 5.89e-08 | 106 |