FFCP PHASE1:Hg19::chr14:38371323..38371347,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000554257,uc001wuk.1_5end | |||
|description=CAGE_peak_1_at_ENST00000554257_5end,CAGE_peak_1_at_uc001wuk.1_5end | |||
|id=chr14:38371323..38371347,- | |||
|ontology_enrichment_celltype=CL:0000057!1.30e-38!75;CL:0002620!1.74e-29!23;CL:0000055!3.16e-18!180;CL:0002334!1.65e-12!12;CL:0002551!1.13e-10!6;CL:0002320!1.95e-07!365;CL:0000134!9.27e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.01e-56;23!CL:0002551;1.75e-18;6!CL:0002583;3.61e-15;2!CL:0000057;8.53e-14;73!CL:0002334;1.97e-09;12!CL:0002574;1.22e-08;1!CL:0002591;4.10e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.16e-56,23;CL:0000057,1.29e-32,76;CL:0002551,9.05e-19,6;CL:0002583,4.16e-15,2;CL:0002334,2.01e-09,12;CL:0002574,1.13e-08,1;CL:0000134,1.33e-08,354;CL:0002320,2.43e-08,361;CL:0002591,5.43e-08,1;CL:0000219,2.00e-07,386;CL:0000048,4.29e-07,427;CL:0000723,6.30e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.68e-09!5;DOID:450!3.68e-09!5;DOID:66!3.68e-09!5;DOID:423!3.68e-09!5;DOID:0080000!3.68e-09!5;DOID:11722!3.68e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:17;2.78e-22;5!DOID:450;2.78e-22;5!DOID:66;2.78e-22;5!DOID:423;2.78e-22;5!DOID:0080000;2.78e-22;5!DOID:11722;2.78e-22;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.64e-22,5;DOID:450,2.64e-22,5;DOID:66,2.64e-22,5;DOID:423,2.64e-22,5;DOID:0080000,2.64e-22,5;DOID:11722,2.64e-22,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.37e-21!95;UBERON:0002199!2.19e-21!45;UBERON:0002416!2.19e-21!45;UBERON:0002097!4.49e-19!40;UBERON:0002067!3.70e-09!9;UBERON:0004016!3.70e-09!9;UBERON:0010083!3.70e-09!9;UBERON:0002384!1.67e-08!375;UBERON:0000078!3.32e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.17e-25;41!UBERON:0002199;1.11e-24;46!UBERON:0002416;1.11e-24;46!UBERON:0003102;1.67e-22;50!UBERON:0002067;7.80e-19;9!UBERON:0007195;1.05e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,3.00e-40,46;UBERON:0002416,3.00e-40,46;UBERON:0002097,4.29e-35,41;UBERON:0003102,8.98e-27,99;UBERON:0002067,4.35e-19,9;UBERON:0004016,4.35e-19,9;UBERON:0010083,4.35e-19,9;UBERON:0002384,5.87e-09,371;UBERON:0007195,1.05e-08,1 | |||
|phase1_expression=0,0.214100523890983,0.704772020479856,0,0,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.633152558322899,0.132409180813219,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0.302714855289863,0,0,1.5608003841516,0.570471821544449,0.747243402759005,1.40921398372518,2.26622122115384,1.54495887372473,0.408308342509787,0,0.413303124703062,1.18800285728205,0.494533858557114,0.910161361938026,0,0.336672227908132,0.625592599359821,3.3247693858102,0,0,0.901428353439581,0.113432183160021,1.25572744982203,1.49490172172997,0.423863802319124,1.20036438433761,4.43125875725287,0.515281080091258,8.56137539125313,1.0126579934476,0.974370051611986,0.504867548488229,1.38074847963449,0,0.355009592516614,2.61955455391865,3.05209066158878,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0.168584690078102,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0.411309970813294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.542530047399471,0,0.356857977594324,0,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,4.51794795234031,0,0,0,0,0,0,0,0,1.98486246255021,0.306923946576125,0.280660094433074,1.02511319404561,0.511707249066704,0.804269605718038,0,2.00472601943452,2.13074070375753,0.657017248110473,0,0.929683027679674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0.386682873168488,0,0.15350367472613,0.275673144969061,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,6.66821940867821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,1.55715908783166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0.171986032471617,0,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.687481272035051,0,0,0,0.223171457441873,0.268733889946905,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49254802886874,0.934853239388898,1.10961172300523,0.947015026375446,0.50313580350515,0.889811221596536,0,0.756154618816195,0.777186002913902,0.295710299979268,0.159296767163702,0,0,0,0.53168342911599,0,0,0,0,0.727394636810238,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41854280604418,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05105676373734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0.4226557275834,0.509781344063451,0,0,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0.743990036333503,0,0.865253124247578,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.852935927603924,0.23806443146374,0.193766729508018,0.0620747142958579,0,0.12729431655633,0,1.08858373948481,0.684466602170562,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p1@ENST00000554257,p1@uc001wuk.1 | |||
}} |
Revision as of 19:51, 11 January 2014
Short description: | p1@ENST00000554257, p1@uc001wuk.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000554257_5end, CAGE_peak_1_at_uc001wuk.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000554257, uc001wuk.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.16e-56 | 23 |
fibroblast | 1.29e-32 | 76 |
fibroblast of dermis | 9.05e-19 | 6 |
subcutaneous preadipocyte | 4.16e-15 | 2 |
preadipocyte | 2.01e-09 | 12 |
stromal cell of pancreas | 1.13e-08 | 1 |
mesenchymal cell | 1.33e-08 | 354 |
connective tissue cell | 2.43e-08 | 361 |
smooth muscle cell of the pulmonary artery | 5.43e-08 | 1 |
motile cell | 2.00e-07 | 386 |
multi fate stem cell | 4.29e-07 | 427 |
somatic stem cell | 6.30e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
integument | 3.00e-40 | 46 |
integumental system | 3.00e-40 | 46 |
skin of body | 4.29e-35 | 41 |
surface structure | 8.98e-27 | 99 |
dermis | 4.35e-19 | 9 |
dermatome | 4.35e-19 | 9 |
future dermis | 4.35e-19 | 9 |
connective tissue | 5.87e-09 | 371 |
stroma of bone marrow | 1.05e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.64e-22 | 5 |
myotonic disease | 2.64e-22 | 5 |
muscle tissue disease | 2.64e-22 | 5 |
myopathy | 2.64e-22 | 5 |
muscular disease | 2.64e-22 | 5 |
myotonic dystrophy | 2.64e-22 | 5 |