FFCP PHASE1:Hg19::chr13:77459217..77459255,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:77459217..77459255,+ | |||
|id=chr13:77459217..77459255,+ | |||
|ontology_enrichment_celltype=CL:0002194!3.25e-08!63;CL:0000576!3.25e-08!63;CL:0000040!3.25e-08!63;CL:0000559!3.25e-08!63;CL:0000115!4.30e-08!35;CL:0002009!1.68e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000115;7.65e-13;36!CL:0002139;5.39e-12;24!CL:0000473;1.00e-10;39!CL:0000234;1.00e-10;39!CL:0000235;5.43e-10;6!CL:0002556;2.40e-08;6!CL:0000071;9.78e-08;18!CL:0002078;1.78e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.27e-14,36;CL:0002139,3.84e-12,24;CL:0002194,9.87e-11,59;CL:0000576,9.87e-11,59;CL:0000040,9.87e-11,59;CL:0000559,9.87e-11,59;CL:0002078,1.05e-10,45;CL:0000473,1.30e-10,48;CL:0000234,1.30e-10,48;CL:0002009,3.36e-10,61;CL:0000235,5.51e-10,6;CL:0000839,5.13e-09,66;CL:0000766,7.81e-09,72;CL:0000557,8.40e-09,67;CL:0002556,5.14e-08,6;CL:0000071,8.73e-08,18;CL:0002546,8.73e-08,18;CL:0000213,2.81e-07,58;CL:0000215,2.81e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;9.78e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!8.28e-15!625;UBERON:0000480!1.29e-14!626;UBERON:0000468!1.53e-14!659;UBERON:0000922!1.80e-13!612;UBERON:0002050!8.23e-13!605;UBERON:0005423!8.23e-13!605;UBERON:0000923!1.73e-12!604;UBERON:0005291!1.73e-12!604;UBERON:0006598!1.73e-12!604;UBERON:0002532!1.73e-12!604;UBERON:0002204!2.50e-08!167;UBERON:0004765!6.58e-08!101;UBERON:0001434!6.58e-08!101;UBERON:0002193!1.12e-07!112;UBERON:0007023!1.45e-07!115;UBERON:0000926!1.51e-07!448;UBERON:0004120!1.51e-07!448;UBERON:0006603!1.51e-07!448;UBERON:0003081!7.24e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001758;2.40e-08;6!UBERON:0003672;2.40e-08;6!UBERON:0004638;9.78e-08;18!UBERON:0001986;9.78e-08;18!UBERON:0004852;9.78e-08;18!UBERON:0003129;4.34e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,1.37e-10,93;UBERON:0002193,9.48e-10,108;UBERON:0001434,6.53e-09,100;UBERON:0002371,8.54e-09,76;UBERON:0001758,5.14e-08,6;UBERON:0003672,5.14e-08,6;UBERON:0004638,8.73e-08,18;UBERON:0001986,8.73e-08,18;UBERON:0004852,8.73e-08,18;UBERON:0001474,9.85e-08,82;UBERON:0003081,1.80e-07,203;UBERON:0002390,5.74e-07,98;UBERON:0003061,5.74e-07,98;UBERON:0003129,8.22e-07,7 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0.919421224478927,0,0,0,0,0,0.553995408531877,0.200544447470142,1.51907609501096,2.01523926815932,0.647787332037959,2.57575567634187,1.30858414901608,0,0.485168122375632,0.697287110717054,0,0,3.74000110018796,1.7931249457037,0.709446689665756,1.37898272294647,0,1.35426486594342,0.941211697713023,0.545812300115692,0.224723484445085,2.44867113896722,0.320929027076094,1.91801137739712,2.30895910130701,0.797854630486527,1.27867425159808,1.7412554317715,0,0,1.25624332628372,1.0429658368404,1.3031330682307,0.605399502633369,0,0,0,0,0.209658645508376,0.561643155732475,0.450530678524519,0.32145117339416,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.383587685530591,0.361439152384566,0.50133791063589,0.434539556882471,0,0.486634870302636,0,0,0,0.523916301990851,0.364295288292542,0,0,0.348259474598534,1.06366368415092,0.953962497221368,0,0,0,0,1.04142150482278,0.56530794192401,2.09749718104953,1.37559020970034,0.626984899610432,2.58416759169329,0.71153252537342,0,1.61131726843659,0,6.34561349625241,1.83831540172934,6.48113558305408,0.892997282840798,2.02076435363553,1.68917220724983,0,0,0.183201743930407,0,0,0.436094052142534,0.496971951695318,1.51956613997496,0.132409180813219,0.286836620748814,0.709336764396714,0,0,0.74000264525148,0,0.404132016209064,1.14423332179421,0.454072282934794,1.72852777344,0,4.99456122928513,0,3.58676833324323,0.587172493218824,0.971237666208789,0.702254033511242,1.63323337003915,2.08818339430006,0.826606249406124,0,1.23633464639278,0,0,2.02003336744879,1.37630371859161,1.10825646193673,1.31693286264251,2.14541457059314,0.751190294532984,0.794025282120147,0,0,0.423863802319124,0,0,0,0,0.168776332241266,0,0,0,0.646584227275248,0,0,0,0.193260853163297,0,0,0,0,0,0.207322110030741,0.504641701751257,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0.118306800039844,0.337169380156203,0.241011029883482,0.441175890929576,0.217879444092406,0,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0.219500570817251,0,0.603173834469785,0.370353780634118,0,3.11980435583874,0,0,0.117408694235822,2.30986316417718,2.31492756288305,2.85381228351897,0,0,3.44703808522356,0.702012795417713,2.37809859661965,0,0,0.708875486211932,0.447792613514241,0,0.383382679165211,0,0,0,0,0,0.126995788584338,0,0,1.71072446022705,0.205654985406647,0,0.571652865261156,0,0.43596006883328,1.68678057388185,0,0,1.690605505112,0,0,0.771622122786426,1.41849132023278,0.266422179016099,0,0,0,1.30294473717494,0,0.791951872933429,0,0,0,7.29742683847143,3.51579964002488,10.5416969741516,0,0,0,0.144781306667579,0.821905290201534,0.358121926479791,0,0,0.215627574859517,0,0,1.30139853857622,0.773288812777695,0.502548796003046,0.637938751653163,0.749007023947182,2.99161459204025,0,0.24538298343828,0.500170521059677,0.542530047399471,0.623912584592421,1.42743191037729,0.946214490203608,1.17141414992713,0,0,0,0,0,0.173767228936166,0.195801157462741,0.343143423810856,0.206768026122887,0.862856803274467,0.853820462427555,0.303127571446259,0,0,0.496215615637554,0.767309866440312,0,0.128139149255701,0,0,0,2.15893571323718,2.30830242907065,1.23190734020714,1.03850885836724,1.74315567689939,0,0.200506470303285,0.0920809889358963,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,2.27466768141793,0.340187410553031,0.215915916102139,1.54227252690289,0,0,0.254876273045038,0,0,0,0,0,0,0,0.618246069886334,0.54941678891006,0.082509499920588,0,0,0,0.580024309752732,0.154048617114644,0.15350367472613,0.275673144969061,0.107420244868274,0.290033387828457,0.170453254832202,0.445160178233687,0.330569830721956,0.192190067365106,0.255225424989168,0,1.39453664789186,0,0,0.308033580176089,0,0,0.55597265731176,0.286249773483982,0,0.316379424718726,0.190630193923825,0.511795582622668,0.855877976067841,0.95460974377781,0,0.179872457583315,0.54907405947211,0.235624804691373,0.202182481573316,0,0.421258456238981,0,0.974853958525138,0,0,0.282810863907425,0,0,1.32687795048244,0,0,0.655894752046633,0.202910376962704,0.6196469961995,0.281695602532241,0.143411352204052,0.196498082026242,0,0,0.633322905892992,0.987884678879706,1.89736586882858,0.699869440489966,0.0962221127255121,0,0,0,0,0,0,0,0,0,1.13929437434833,0.476463550915578,0,0,0,0.79312517629427,0,0,0,0.185803175125719,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,1.46508179271894,0,0,0,0.95497793895076,0,0.614321404198464,0,0.844016498463076,0.222617410045812,0,0,2.19172787076177,0,1.76352923497993,0,0,0,0.179736702294654,0,0.511572370226872,0.394573622547734,4.7896618469388,1.11136990144637,0,0.463840490809256,3.99227596002388,0,0,1.44999915086959,0.682760689712998,0,0,0.344743373241465,0,0.173624994933292,0,0.60298219312704,0,0.442317039724898,1.47773809476774,0.219385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| |||
|short_description=p@chr13:77459217..77459255,+ | |||
}} |
Revision as of 18:06, 11 January 2014
Short description: | p@chr13:77459217..77459255, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:77459217..77459255, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.27e-14 | 36 |
endothelial cell of vascular tree | 3.84e-12 | 24 |
monopoietic cell | 9.87e-11 | 59 |
monocyte | 9.87e-11 | 59 |
monoblast | 9.87e-11 | 59 |
promonocyte | 9.87e-11 | 59 |
meso-epithelial cell | 1.05e-10 | 45 |
defensive cell | 1.30e-10 | 48 |
phagocyte | 1.30e-10 | 48 |
macrophage dendritic cell progenitor | 3.36e-10 | 61 |
macrophage | 5.51e-10 | 6 |
myeloid lineage restricted progenitor cell | 5.13e-09 | 66 |
myeloid leukocyte | 7.81e-09 | 72 |
granulocyte monocyte progenitor cell | 8.40e-09 | 67 |
fibroblast of periodontium | 5.14e-08 | 6 |
blood vessel endothelial cell | 8.73e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.73e-08 | 18 |
lining cell | 2.81e-07 | 58 |
barrier cell | 2.81e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
immune system | 1.37e-10 | 93 |
hemolymphoid system | 9.48e-10 | 108 |
skeletal system | 6.53e-09 | 100 |
bone marrow | 8.54e-09 | 76 |
periodontium | 5.14e-08 | 6 |
dentition | 5.14e-08 | 6 |
blood vessel endothelium | 8.73e-08 | 18 |
endothelium | 8.73e-08 | 18 |
cardiovascular system endothelium | 8.73e-08 | 18 |
bone element | 9.85e-08 | 82 |
lateral plate mesoderm | 1.80e-07 | 203 |
hematopoietic system | 5.74e-07 | 98 |
blood island | 5.74e-07 | 98 |
skull | 8.22e-07 | 7 |