FFCP PHASE1:Hg19::chr13:76432112..76432152,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3385 | |||
|description=CAGE_peak_at_chr13:76432112..76432152,+ | |||
|id=chr13:76432112..76432152,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.45e-09!75 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.51e-09;12!CL:0002579;3.72e-07;3!CL:0000135;4.07e-07;3!CL:0000388;4.07e-07;3!CL:0002580;5.77e-07;3!CL:0002615;8.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.02e-11,76;CL:0002334,1.10e-09,12;CL:0002580,3.06e-07,3;CL:0000135,3.39e-07,3;CL:0000388,3.39e-07,3;CL:0002579,4.40e-07,3;CL:0002615,5.16e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;6.71e-08;4!UBERON:0007284;6.71e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.79e-09;5!DOID:450;1.79e-09;5!DOID:66;1.79e-09;5!DOID:423;1.79e-09;5!DOID:0080000;1.79e-09;5!DOID:11722;1.79e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.39e-09,5;DOID:450,2.39e-09,5;DOID:66,2.39e-09,5;DOID:423,2.39e-09,5;DOID:0080000,2.39e-09,5;DOID:11722,2.39e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0004923!2.13e-08!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.77e-13;9!UBERON:0000042;1.77e-13;9!UBERON:0003688;2.77e-12;6!UBERON:0002358;2.77e-12;6!UBERON:0003684;2.77e-12;6!UBERON:0001178;2.77e-12;6!UBERON:0007846;4.07e-07;3!UBERON:0000043;4.07e-07;3!UBERON:0007845;4.07e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.90e-12,6;UBERON:0002358,1.90e-12,6;UBERON:0003684,1.90e-12,6;UBERON:0001178,1.90e-12,6;UBERON:0004457,6.88e-10,12;UBERON:0000042,6.88e-10,12;UBERON:0004797,3.58e-09,7;UBERON:0004923,4.31e-08,66;UBERON:0007846,3.39e-07,3;UBERON:0000043,3.39e-07,3;UBERON:0007845,3.39e-07,3 | |||
|phase1_expression=1.99846217197612,3.63970890614671,1.69145284915165,8.00586386825043,2.68176656656373,5.23403114460221,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0.255725123687061,1.0843174571537,1.00267582127178,2.462390822334,0,0,0,0.221729397462564,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,4.47274756525787,3.16576279161449,0.529636723252875,1.43418310374407,1.06400514659507,0,0,0,0.311211035399766,0.134710672069688,0.653847612453835,0,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0,0.491337269247072,0.103325781175765,0,0.741800787835671,0,0,0.336672227908132,0.125118519871964,0,0.438977620880838,1.5324389789951,0.901428353439581,0.340296549480063,5.74046834204358,1.92201649936711,1.05965950579781,2.40072876867522,1.13357782162283,3.34932702059318,0.930584281657949,1.5189869901714,0.876933046450788,2.27190396819703,0.736399189138395,0.161646056818812,3.55009592516614,0.604512589365842,1.69560592310488,0,0,0,0,0,0,0,0.252320850875628,0,0,1.28648187638577,0,0.928735856063958,0,0.354920400119532,0.674338760312407,0.482022059766964,0.55146986366197,0,0.71181185733329,0.269662616320329,0.196221465125346,0.769494313892781,0,0,0,0,2.53510069643662,0.982827216677626,1.18157981336281,0,0.737930631258681,0,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0.141775097242386,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.5867062865676,1.29271715757778,0,0,1.32969058292435,1.04007436911366,0,0,0.532844358032199,0,0,0,0,0.355391948742546,0,0.602878754119172,0,0.099972991182057,0,0,0,2.87549826589899,0,0,2.31650090668127,2.26023954805422,1.79060963239896,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.813795071099207,1.24782516918484,2.49800584316026,0.946214490203608,2.10854546986884,0,0,0,1.32845119707087,0.553107505625109,0.868836144680828,0,0,0,0,0,0.303127571446259,0,0.604780586659361,1.98486246255021,6.44540287809862,5.89386198309454,2.56278298511402,2.04682899626681,6.75586468803151,1.48418066444991,0.462629081407967,1.24293207719189,0.246381468041427,0,0.116210378459959,0.120859449591622,0,0.644566922551274,1.14814448164607,1.27463817604702,0.786746489756545,0,0,0,0,0.105551628892876,1.13733384070897,0,0.431831832204279,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0.309123034943167,0.824125183365091,0.082509499920588,0,0,3.21367859688319,0.193341436584244,0,0,0.137836572484531,0,0.145016693914229,0,0.534192213880424,0,0.576570202095319,0.255225424989168,0.4046311234222,3.253918845081,1.25924938732256,0.6970372701606,0,0.532306030317022,0,0.18532421910392,0.429374660225974,0.744316738719335,0.316379424718726,0,0,0.42793898803392,0,0,0,0.823611089208164,0.235624804691373,0.202182481573316,1.58510321173008,0,0,0.731140468893853,1.05650146756755,0.818999468447914,0.282810863907425,0,0,0,1.31535265576129,0,0,0.202910376962704,0,0,0.143411352204052,0.392996164052485,0,0.709522128141196,1.47775344708365,2.96365403663912,0,0,0,0,0,0.564862804660675,0,0,0,0.229723400206959,0,0.764637207142375,0,0,0,0,0,0,0,0.962479855263359,0,0.929015875628594,0,0.0711418433484141,0.318852545457645,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,1.03051603426729,0,0,0,0.19538809540204,0.278406173895242,0,0.540911356951966,0,0,0.18714054040822,0,0,0,0,2.62618933211459,0.890894042497916,6.45037474408387,0,1.1253553312841,0,0,0.422250816255987,0.398495976502139,0,0.251932747854276,0.20453736500431,0,1.55519793830904,0.0898683511473268,0.537063524026827,0,0,0,0,0.969332746095218,0,0,0.260427761085233,0,0,0.455173793141999,1.01701460117107,1.18193840883968,0.344743373241465,0,0,0.885741385813839,0.723578631752448,0,0.221158519862449,0,0.658156191461918,0.10893846351899,0.41827123283581,0.153900517007594,0.113942055847001,0,0.0897576444097721,0,0.31900115973192,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0,0.632994193584081,0.163232808159148,0.424059214301822,0.216388639742091,0.995261931078505,0.0884575645033392,1.22206028986725,0.296521128680622,0,0.104421949505455,0,0.802577647298789,0.702793337176017,0.547364367646998,0,0,0,0,0.30607276163049,0,0.150323419414493,0.103688191397247,0,0,0,0,0.284609546029793,0,0.173559738335131,0.391969589657511,0,0.17472666824203,0,0.19351266257817,0.292357268344742,0.164230914106418,0.581934098930517,0.0882561266915003,0,0.137041924646751,0,0.126621591911757,2.73771935828724,0.0801588202515337,0.213452994739353,0,0.432271251462318,0.114536596165916,0,0.8643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| |||
|short_description=p@chr13:76432112..76432152,+ | |||
}} |
Revision as of 18:05, 11 January 2014
Short description: | p@chr13:76432112..76432152, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr13:76432112..76432152, + |
Coexpression cluster: | C3385_Fibroblast_mesenchymal_Preadipocyte_Adipocyte_amniotic_Ewing_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.02e-11 | 76 |
preadipocyte | 1.10e-09 | 12 |
preadipocyte of the breast | 3.06e-07 | 3 |
fibrocyte | 3.39e-07 | 3 |
tendon cell | 3.39e-07 | 3 |
omentum preadipocyte | 4.40e-07 | 3 |
adipocyte of omentum tissue | 5.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.90e-12 | 6 |
peritoneum | 1.90e-12 | 6 |
abdominal cavity | 1.90e-12 | 6 |
visceral peritoneum | 1.90e-12 | 6 |
cavity lining | 6.88e-10 | 12 |
serous membrane | 6.88e-10 | 12 |
blood vessel layer | 3.58e-09 | 7 |
organ component layer | 4.31e-08 | 66 |
dense regular connective tissue | 3.39e-07 | 3 |
tendon | 3.39e-07 | 3 |
regular connective tissue | 3.39e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.39e-09 | 5 |
myotonic disease | 2.39e-09 | 5 |
muscle tissue disease | 2.39e-09 | 5 |
myopathy | 2.39e-09 | 5 |
muscular disease | 2.39e-09 | 5 |
myotonic dystrophy | 2.39e-09 | 5 |