FFCP PHASE1:Hg19::chr13:73302047..73302073,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79866 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24724 | |||
|TSSclassifier=strong | |||
|UniProt=B4DQ30,Q6PGQ7 | |||
|association_with_transcript=0bp_to_ENST00000377814,ENST00000377815,ENST00000390667,ENST00000464754,ENST00000471712_5end | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_1_at_BORA_5end | |||
|id=chr13:73302047..73302073,+ | |||
|ontology_enrichment_celltype=CL:0000542!3.43e-14!53;CL:0000051!3.43e-14!53;CL:0000838!1.11e-13!52;CL:0000003!1.69e-13!722;CL:0000037!5.92e-12!172;CL:0000566!5.92e-12!172;CL:0002032!8.28e-12!165;CL:0000837!8.28e-12!165;CL:0000945!6.45e-11!24;CL:0000826!6.45e-11!24;CL:0000988!1.36e-10!182;CL:0000012!1.81e-09!682;CL:0000548!2.26e-09!679;CL:0000004!2.26e-09!679;CL:0000255!2.26e-09!679;CL:0000063!6.63e-09!578;CL:0000219!9.91e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.43e-11;24!CL:0000542;1.53e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.39e-14,53;CL:0000051,3.39e-14,53;CL:0000838,1.09e-13,52;CL:0000037,1.50e-11,168;CL:0002032,2.08e-11,161;CL:0000837,2.08e-11,161;CL:0000945,6.39e-11,24;CL:0000826,6.39e-11,24;CL:0000988,2.03e-10,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.53e-08;53 | |||
|ontology_enrichment_disease=DOID:162!2.04e-33!235;DOID:14566!2.86e-32!239;DOID:2531!4.76e-24!51;DOID:0060083!4.76e-24!51;DOID:1240!1.11e-19!39;DOID:0050686!4.61e-18!137;DOID:8692!1.15e-15!31;DOID:0050687!1.57e-11!143;DOID:305!1.17e-10!106 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.28e-15;39!DOID:8692;2.08e-15;31!DOID:2531;4.26e-15;51!DOID:0060083;4.26e-15;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.34e-33,235;DOID:14566,2.99e-32,239;DOID:2531,4.64e-24,51;DOID:0060083,4.64e-24,51;DOID:1240,1.08e-19,39;DOID:0050686,5.13e-18,137;DOID:8692,1.13e-15,31;DOID:0050687,1.63e-11,143;DOID:305,1.19e-10,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@BORA | |||
}} |
Revision as of 18:01, 11 January 2014
Short description: | p1@BORA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BORA_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000377814, ENST00000377815, ENST00000390667, ENST00000464754, ENST00000471712_5end |
EntrezGene: | BORA |
HGNC: | 24724 |
UniProt: | B4DQ30Q6PGQ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.39e-14 | 53 |
common lymphoid progenitor | 3.39e-14 | 53 |
lymphoid lineage restricted progenitor cell | 1.09e-13 | 52 |
hematopoietic stem cell | 1.50e-11 | 168 |
hematopoietic oligopotent progenitor cell | 2.08e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.08e-11 | 161 |
lymphocyte of B lineage | 6.39e-11 | 24 |
pro-B cell | 6.39e-11 | 24 |
hematopoietic cell | 2.03e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.34e-33 | 235 |
disease of cellular proliferation | 2.99e-32 | 239 |
hematologic cancer | 4.64e-24 | 51 |
immune system cancer | 4.64e-24 | 51 |
leukemia | 1.08e-19 | 39 |
organ system cancer | 5.13e-18 | 137 |
myeloid leukemia | 1.13e-15 | 31 |
cell type cancer | 1.63e-11 | 143 |
carcinoma | 1.19e-10 | 106 |