FFCP PHASE1:Hg19::chr13:64652944..64652956,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:64652944..64652956,+ | |||
|id=chr13:64652944..64652956,+ | |||
|ontology_enrichment_celltype=CL:1000415!4.02e-08!2;CL:0000159!1.09e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.53e-16;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.41e-16,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.53e-16;1 | |||
|ontology_enrichment_disease=DOID:14566!2.95e-23!239;DOID:162!1.61e-21!235;DOID:0050687!6.80e-18!143;DOID:305!2.70e-11!106;DOID:0050686!2.82e-10!137;DOID:299!1.25e-09!25;DOID:1115!6.07e-08!20 | |||
|ontology_enrichment_disease_v019=DOID:3112;1.53e-16;1!DOID:4074;6.17e-09;2!DOID:4905;6.17e-09;2!DOID:3498;6.17e-09;2!DOID:1036;1.47e-08;8!DOID:1115;1.42e-07;20 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,3.07e-16,1;DOID:4074,8.09e-09,2;DOID:4905,8.09e-09,2;DOID:3498,8.09e-09,2;DOID:1036,1.42e-08,8;DOID:1115,1.42e-07,20;DOID:162,9.08e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0005162!7.26e-08!2;UBERON:0000122!7.26e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.53e-16;1!UBERON:0001282;1.53e-16;1!UBERON:0001785;1.53e-16;1!UBERON:0002464;1.53e-16;1!UBERON:0004904;1.53e-16;1!UBERON:0009842;1.53e-16;1!UBERON:0003704;1.53e-16;1!UBERON:0001021;1.53e-16;1!UBERON:0001171;1.53e-16;1!UBERON:0001172;1.53e-16;1!UBERON:0003714;6.17e-09;2!UBERON:0005162;6.17e-09;2!UBERON:0000122;6.17e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.65e-16,1;UBERON:0001785,1.65e-16,1;UBERON:0002464,1.65e-16,1;UBERON:0004904,1.65e-16,1;UBERON:0001021,1.65e-16,1;UBERON:0003902,1.65e-16,1;UBERON:0005425,1.65e-16,1;UBERON:0001282,2.25e-16,1;UBERON:0009842,2.25e-16,1;UBERON:0003704,2.25e-16,1;UBERON:0001171,2.25e-16,1;UBERON:0001172,2.25e-16,1;UBERON:0003714,6.42e-09,2;UBERON:0005162,6.42e-09,2;UBERON:0000122,6.42e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.328402357799783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0,0,0.540911356951966,0.66614393599564,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0.409074730008619,0.123084805461069,0,0,0,0,0,0,0,0,0,0,2.60427761085233,0,0,0,0,0,2.41320361269025,0,0,0,0,0,0,0,0,0,0,0,1.25336261431701,0,0,0.325942115766024,0,0,0,0,0,0,0,0,0,0,1.27149263184303,0,0,0,0.216388639742091,0,0,0,0,0,0,0.134802265961354,0,0,0,0,1.21390189767046,0,0,0,0,0,0,0,0,0,0,0,0.693373365065693,0,0,0,0,0,0,0,0,0,0,0,0.548167698587004,0.19871461170299,0,0.586654148204409,0.721429382263803,0,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.247247575143499,0.13480708770837,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0.537862017998534,0,0,0,0,0,0,0,0,1.64185041498678,0,4.64579575232515,0,0,0,0,0,0,0,0,0,0,0.592834895693833,0,0,0,0,0,0,0,0,0,0,0,0.443716206147409,0.0620964029413835,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62065732026684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0.737318726261158,0,0,0,0.688859918643263,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0.11796972334774,0,0,0,0,0,0,0.60511520611056,0,0,1.14640342257068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69924332442079,0,0,0,0,0,0.280272163313789,0,0,0,0.214429632529969,0,0.464965701472501,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0,0.93061915699296,0.955538938977433,0.111855431797792,0.098150233615243,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499705779624645,1.78553938605658,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:64652944..64652956,+ | |||
}} |
Revision as of 17:57, 11 January 2014
Short description: | p@chr13:64652944..64652956, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:64652944..64652956, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.41e-16 | 1 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.65e-16 | 1 |
cranial nerve | 1.65e-16 | 1 |
nerve trunk | 1.65e-16 | 1 |
nerve connecting eye with brain | 1.65e-16 | 1 |
nerve | 1.65e-16 | 1 |
retinal neural layer | 1.65e-16 | 1 |
presumptive neural retina | 1.65e-16 | 1 |
intralobular bile duct | 2.25e-16 | 1 |
acinus | 2.25e-16 | 1 |
intrahepatic bile duct | 2.25e-16 | 1 |
portal lobule | 2.25e-16 | 1 |
hepatic acinus | 2.25e-16 | 1 |
neural tissue | 6.42e-09 | 2 |
multi cell component structure | 6.42e-09 | 2 |
neuron projection bundle | 6.42e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 3.07e-16 | 1 |
pancreas adenocarcinoma | 8.09e-09 | 2 |
pancreatic carcinoma | 8.09e-09 | 2 |
pancreatic ductal adenocarcinoma | 8.09e-09 | 2 |
chronic leukemia | 1.42e-08 | 8 |
sarcoma | 1.42e-07 | 20 |
cancer | 9.08e-07 | 235 |