FFCP PHASE1:Hg19::chr13:20176062..20176075,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:20176062..20176075,+ | |||
|id=chr13:20176062..20176075,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.68e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000039;8.34e-24;7!CL:0000586;8.34e-24;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.83e-24,7;CL:0000586,3.83e-24,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.92e-29;10!UBERON:0005564;3.92e-29;10 | |||
|ontology_enrichment_disease=DOID:14566!7.16e-19!239;DOID:162!1.50e-18!235;DOID:0050687!1.36e-11!143;DOID:305!1.58e-10!106;DOID:0050686!2.67e-09!137 | |||
|ontology_enrichment_disease_v019=DOID:3111;2.25e-19;1!DOID:9119;2.25e-19;1!DOID:3603;2.25e-19;1!DOID:3095;5.13e-08;22!DOID:2994;5.13e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,1.88e-19,1;DOID:3111,2.71e-19,1;DOID:3603,2.71e-19,1;DOID:3095,4.03e-08,22;DOID:2994,4.03e-08,22;DOID:305,5.03e-08,106;DOID:162,5.67e-07,235;DOID:14566,8.24e-07,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.31e-21;8!UBERON:0003135;2.04e-15;11!UBERON:0000991;4.15e-14;21!UBERON:0003101;5.13e-08;22!UBERON:0000079;5.13e-08;22!UBERON:0002323;7.05e-07;45!UBERON:0003133;9.13e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.20e-21,8;UBERON:0003135,1.25e-15,11;UBERON:0000991,3.06e-14,21;UBERON:0009196,3.06e-14,21;UBERON:0009117,3.06e-14,21;UBERON:0005564,3.06e-14,21;UBERON:0004176,1.30e-13,22;UBERON:0003101,4.03e-08,22;UBERON:0000079,4.03e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0.534893840235659,0.410502947249729,0.865818594450472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0,0,0,0,0.169560592310488,0.386521706326594,0.545492241181669,0.286804595389004,0.243947412259191,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.301586917234893,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0.561320188866147,0.128139149255701,0,0,0,0,0.355123450626254,0.0821271560138091,0.519254429183621,0.116210378459959,0.362578348774867,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.183138929636687,0.330037999682352,0,0,0,0,0,0,0.275673144969061,0,0.145016693914229,0.255679882248303,0,0.165284915360978,0,0.638063562472921,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0.159426272728822,1.1974762285969,0.383010740264733,0.211673582723883,0,0,0,0.313359791546046,0,1.86220955581764,0.1605880751037,0,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0,0,0,0.270455678475983,1.33228787199128,0,0,0,0.121360521749513,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,1.26675244876796,0,0,0.503865495708552,0,0.123084805461069,0,0.449341755736634,0,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0.341380344856499,0.254253650292766,0,0,0,0.694499979733169,0,0,0,0,0,0,0.21787692703798,0.139423744278603,0,0.113942055847001,0,0,0,0,0,0,0,0.627921025580099,0,0.451191321234361,0.392125068635479,0,0.37950746544837,0.158936578980379,0,0.489698424477443,0.141353071433941,0,0,0,0,0.889563386041866,0.86494757262552,0.939797545549098,0,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0.313932918407225,0,0,0.138674673013139,0,0.0979923974143777,0,0,0,0.19351266257817,0.146178634172371,0,0,0.617792886840502,0,0.137041924646751,0,0.189932387867636,0,0.320635281006135,0,0,0.144090417154106,0.916292769327325,0,0.432164393964449,0,0.235694034616795,0.407712618220842,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,1.16495949527454,0.236349546921671,0.247247575143499,0.337017719270924,0,0.423366660328922,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0.542999601753713,0,0,1.19730191562487,0.410462603746695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0,0,0,0.553394539744923,0,0,0.285465333544967,0,0.468334905806882,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0.776314784381297,0,0,0.521745061811734,0.150257608997218,0.380805212168795,0,0,0.537052785212442,0,0.796191777397232,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0.192914038270915,0.168942440653073,0.256241518587947,0,0.607719912354764,0,0,0,0,0.327609848846413,0.245772908753719,1.26787274015176,0.39997479170986,0,0,0,0,0.279759015438889,0,0,0.215649622793364,0.157265941855896,0.109209638192014,0.169732529954025,0.850299680406731,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.207471757392654,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.443568258651136,0.202612753855184,0.781078098613847,0,0.19024743058172,0,0,0,0.175871244359621,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0,0.0657727735628491,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.68732060563215,0,0,0.111855431797792,0,0.121917924982269,0,0,0,0,0,0.198950775161368,0,0.45178432815584,0.439762066981716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0,0.432626562123789,0,0.764859003745869,0,1.63182127587171,1.60330443159336,1.92979289023174,0.250707539292375,0.227336094654718,0.535928260312357,0,0,0,0,0,0,0.672791175483681,0.0636471582781649,0,0,0,0,0,0.332660356546013,0.40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| |||
|short_description=p@chr13:20176062..20176075,+ | |||
}} |
Revision as of 16:51, 11 January 2014
Short description: | p@chr13:20176062..20176075, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:20176062..20176075, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.83e-24 | 7 |
germ cell | 3.83e-24 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 3.20e-21 | 8 |
male reproductive organ | 1.25e-15 | 11 |
gonad | 3.06e-14 | 21 |
indifferent external genitalia | 3.06e-14 | 21 |
indifferent gonad | 3.06e-14 | 21 |
gonad primordium | 3.06e-14 | 21 |
external genitalia | 1.30e-13 | 22 |
male organism | 4.03e-08 | 22 |
male reproductive system | 4.03e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 1.88e-19 | 1 |
cystadenocarcinoma | 2.71e-19 | 1 |
mucinous cystadenocarcinoma | 2.71e-19 | 1 |
germ cell and embryonal cancer | 4.03e-08 | 22 |
germ cell cancer | 4.03e-08 | 22 |
carcinoma | 5.03e-08 | 106 |
cancer | 5.67e-07 | 235 |
disease of cellular proliferation | 8.24e-07 | 239 |