FFCP PHASE1:Hg19::chr12:120703523..120703548,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5829 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9718 | |||
|TSSclassifier=strong | |||
|UniProt=F8VZ39 | |||
|association_with_transcript=0bp_to_ENST00000547772,ENST00000547983_5end | |||
|description=CAGE_peak_1_at_PXN_5end | |||
|id=chr12:120703523..120703548,- | |||
|ontology_enrichment_celltype=CL:0000220!1.21e-11!246;CL:0000066!1.33e-11!254;CL:0002321!2.41e-11!248;CL:0000076!9.13e-11!62;CL:0000115!1.68e-10!35;CL:0002078!4.72e-10!44;CL:0000222!6.97e-10!119;CL:0000213!8.27e-09!57;CL:0000215!8.27e-09!57;CL:0002139!1.63e-07!24;CL:0000071!2.21e-07!18;CL:0002546!2.21e-07!18;CL:0002076!8.22e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000115;2.80e-09;36!CL:0002139;1.68e-07;24!CL:0000071;2.26e-07;18!CL:0002078;8.32e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.41e-12,250;CL:0000066,2.32e-11,253;CL:0000115,4.89e-11,36;CL:0000076,7.94e-11,63;CL:0002078,1.49e-10,45;CL:0000222,1.59e-10,121;CL:0000213,2.99e-09,58;CL:0000215,2.99e-09,58;CL:0002139,1.63e-07,24;CL:0000071,2.21e-07,18;CL:0002546,2.21e-07,18;CL:0002076,9.48e-07,42 | |||
|ontology_enrichment_development_v019=CL:0002546;2.26e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!8.40e-10!110;UBERON:0001009!1.52e-09!113;UBERON:0002049!2.60e-09!79;UBERON:0007798!2.60e-09!79;UBERON:0003081!3.69e-09!216;UBERON:0000055!5.09e-09!69;UBERON:0000926!5.96e-09!448;UBERON:0004120!5.96e-09!448;UBERON:0006603!5.96e-09!448;UBERON:0000467!1.49e-08!625;UBERON:0000480!2.76e-08!626;UBERON:0001981!3.06e-08!60;UBERON:0007500!3.06e-08!60;UBERON:0004537!3.06e-08!60;UBERON:0006965!3.06e-08!60;UBERON:0000487!8.75e-08!22;UBERON:0000468!1.23e-07!659;UBERON:0001986!2.21e-07!18;UBERON:0004638!2.21e-07!18;UBERON:0004852!2.21e-07!18;UBERON:0003914!3.44e-07!118;UBERON:0004872!3.95e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;9.31e-08;22!UBERON:0004638;2.26e-07;18!UBERON:0001986;2.26e-07;18!UBERON:0004852;2.26e-07;18!UBERON:0000490;9.45e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.05e-09,109;UBERON:0000926,1.48e-09,315;UBERON:0004120,1.48e-09,315;UBERON:0006603,1.48e-09,315;UBERON:0001009,1.90e-09,112;UBERON:0002049,3.23e-09,78;UBERON:0007798,3.23e-09,78;UBERON:0000055,6.27e-09,68;UBERON:0003081,9.67e-09,203;UBERON:0007500,3.75e-08,59;UBERON:0001981,3.75e-08,59;UBERON:0004537,3.75e-08,59;UBERON:0006965,3.75e-08,59;UBERON:0000487,8.75e-08,22;UBERON:0004638,2.21e-07,18;UBERON:0001986,2.21e-07,18;UBERON:0004852,2.21e-07,18;UBERON:0004872,4.88e-07,83;UBERON:0003914,5.82e-07,117 | |||
|phase1_expression=29.6135758211007,39.1803958720499,31.8556953256895,44.0322512753774,53.6353313312745,60.1913581629254,15.1979926900986,48.0107103804391,44.1403711657727,115.986418028712,295.867695220309,145.700395210825,201.781738344767,42.6993917712161,92.1284704523606,71.2664655238882,55.4478965782059,57.6944971406025,58.5519358548608,119.673668450638,194.616659447017,94.3498711649044,28.6235987131057,70.6272033376083,46.3252340104822,4.66121775062503,3.20192298854788,4.72264687882075,62.9382842958246,68.3216328613039,76.9436132880898,233.532991017648,298.796271428024,243.298138689746,7.35938405512865,5.11809236954717,5.28480790802725,80.3293342371222,146.196902205733,140.406033353156,54.1875447660617,59.5964345474922,65.6817697467176,147.433814122479,154.173385025034,151.129870120009,119.003666895711,120.883359078417,75.5683544984053,99.2538753511419,125.006424786201,41.8573546902796,80.3257436116321,107.150457474915,69.0675081631143,118.780916251384,126.901359776898,44.0458029512366,107.741530114558,85.0461921751648,92.0645461150619,138.537546078421,149.198815900981,138.949268673658,87.3529808272038,102.129340444405,70.3789141365,111.805656039251,118.898105399806,61.0300653621378,82.3343323581382,61.5023652099233,32.912088293852,24.7168684984972,29.7646019951061,28.5135757891391,71.1040235157314,60.9718184936516,101.578570792555,2.85012743741249,2.38700012638908,3.10529061399878,1.75996244461323,4.91524750135918,0,3.41384178053206,3.2031678962881,0.574752439954483,5.2883589822789,3.81621501814146,2.84606484554724,2.93618594685469,3.05818582500183,5.28685314316103,24.6623767711876,6.32121803460185,92.8470114937292,111.222045858014,136.108192337675,60.6886978268162,43.0217391956339,45.9244371562691,74.0341567950063,59.6045944335679,39.1825856941533,48.2943890192294,61.4724770746585,93.6347547194685,72.1829378957324,75.9703119268984,71.2983045887489,63.7566788617115,60.6492043332827,71.7009419280431,86.7644847581307,86.6816471636381,45.2200182450267,47.4205874766029,65.7851199250707,40.7763730334844,49.4823424930878,32.3153695112447,60.982923226498,75.6400871922613,41.2271397622741,60.8517537753123,45.1620398306576,88.7069670188823,139.336342003207,116.728469529536,102.398883851864,57.6802739345127,37.3358680583109,39.3968676099177,28.0749229956098,24.1893686664576,32.6067238290951,50.1233916411715,58.4225170073939,73.3924305601087,87.3077769789673,44.0744589049803,248.449386615514,190.583203591197,27.5865284606481,30.646833764671,52.7843103259895,3.33886874027479,2.28797964312051,1.11437250398869,102.362639793853,140.218239002298,146.840432180012,149.241296667939,157.312288578715,125.178709082731,133.965773550096,95.6142008926517,94.9895921373516,102.089786893224,105.138451765487,98.8353737434066,132.03757313356,111.769576425144,139.344415035663,74.7438725737748,172.438558176898,157.205626754718,157.91613658986,83.5353780419953,107.356221943219,227.980122164389,263.690579620861,155.249482562742,88.4610074017667,37.8625229877093,48.1969418160116,90.3535355358763,90.4404374605811,61.6745360156538,49.1045380356643,68.8202460083876,54.1507201595593,64.2569905772412,73.7213183041699,68.5649147231539,60.4984720703999,78.2633582324881,107.0709063528,107.819174271901,84.886850553423,89.2502189692613,96.4762748434064,98.315564691574,79.8242809606633,74.5604306082432,110.145282733366,36.8280885757437,40.0572425431262,284.880506286602,200.494461566731,58.9176398839232,100.970645536675,102.513722729148,95.2581437311418,53.3288764690294,41.7661803760339,31.8744434679659,104.404767970918,40.5759038755278,44.0818354411889,124.837895971111,75.3313988732988,109.239588979347,55.6489400431454,73.2489281927095,54.7595969005936,115.867102378049,41.7906539836039,49.6253394433753,110.407983272667,80.5009264838846,62.3982979702594,72.279559083073,88.6424891920213,113.861424369435,49.7652721008749,34.0601504586217,50.7767530339795,58.9831403037458,46.9316782628669,16.4239811584123,53.1928409921374,68.1835394484458,104.982540227885,56.1885192918695,80.128622465324,25.3176552085266,21.2416709498408,24.8241360779986,22.8308523556055,27.6706893997356,25.6252268639984,24.5392980851499,23.1541328847908,17.698369219534,229.566346388266,199.143318800893,91.7810045269022,141.12836293012,16.478154526838,19.6565443335525,24.813176080619,6.18048339180511,38.4953812639945,83.0388201844864,137.078106475373,155.114419495515,166.878094203307,109.069188396748,39.7486132478596,150.790543865539,90.9287454759222,45.0969275353049,57.1780340928452,68.7184291342711,70.3737979116448,78.5749648728891,76.6498266020497,67.8204068054949,51.2131372661786,36.2706610965818,65.5463425693292,37.4935335947108,68.0327619205381,97.3994918055195,116.067845422891,86.8995476156746,229.262842140796,5.91195885475132,5.01876073875388,25.0867019804334,50.7302236027704,16.5377587788558,21.0813009050001,43.9286689392019,36.3374086351146,65.007529488628,42.6734094718793,44.7511156187437,43.4456177598479,117.849769646974,221.467714967306,58.0839223701924,43.4352964946133,2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49346607246,5.12909587685173 | |||
|short_description=p1@PXN | |||
}} |
Revision as of 16:15, 11 January 2014
Short description: | p1@PXN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PXN_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000547772, ENST00000547983_5end |
EntrezGene: | PXN |
HGNC: | 9718 |
UniProt: | F8VZ39 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.41e-12 | 250 |
epithelial cell | 2.32e-11 | 253 |
endothelial cell | 4.89e-11 | 36 |
squamous epithelial cell | 7.94e-11 | 63 |
meso-epithelial cell | 1.49e-10 | 45 |
mesodermal cell | 1.59e-10 | 121 |
lining cell | 2.99e-09 | 58 |
barrier cell | 2.99e-09 | 58 |
endothelial cell of vascular tree | 1.63e-07 | 24 |
blood vessel endothelial cell | 2.21e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.21e-07 | 18 |
endo-epithelial cell | 9.48e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 1.05e-09 | 109 |
mesoderm | 1.48e-09 | 315 |
mesoderm-derived structure | 1.48e-09 | 315 |
presumptive mesoderm | 1.48e-09 | 315 |
circulatory system | 1.90e-09 | 112 |
vasculature | 3.23e-09 | 78 |
vascular system | 3.23e-09 | 78 |
vessel | 6.27e-09 | 68 |
lateral plate mesoderm | 9.67e-09 | 203 |
epithelial tube open at both ends | 3.75e-08 | 59 |
blood vessel | 3.75e-08 | 59 |
blood vasculature | 3.75e-08 | 59 |
vascular cord | 3.75e-08 | 59 |
simple squamous epithelium | 8.75e-08 | 22 |
blood vessel endothelium | 2.21e-07 | 18 |
endothelium | 2.21e-07 | 18 |
cardiovascular system endothelium | 2.21e-07 | 18 |
splanchnic layer of lateral plate mesoderm | 4.88e-07 | 83 |
epithelial tube | 5.82e-07 | 117 |