FFCP PHASE1:Hg19::chr12:110434073..110434090,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9815 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4273 | |||
|TSSclassifier=strong | |||
|UniProt=F8W822 | |||
|association_with_transcript=5bp_to_ENST00000320063_5end | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_5_at_GIT2_5end | |||
|id=chr12:110434073..110434090,- | |||
|ontology_enrichment_celltype=CL:0000037!1.62e-40!172;CL:0000566!1.62e-40!172;CL:0000988!1.27e-37!182;CL:0000738!7.64e-37!140;CL:0002032!1.31e-36!165;CL:0000837!1.31e-36!165;CL:0002087!2.20e-30!119;CL:0002031!7.88e-28!124;CL:0000542!1.37e-24!53;CL:0000051!1.37e-24!53;CL:0000838!5.32e-24!52;CL:0000763!3.38e-14!112;CL:0000049!3.38e-14!112;CL:0000084!4.63e-12!25;CL:0000827!4.63e-12!25;CL:0000134!9.79e-12!358;CL:0000945!1.22e-11!24;CL:0000826!1.22e-11!24;CL:0000766!5.06e-11!76;CL:0000791!5.52e-11!18;CL:0000789!5.52e-11!18;CL:0002420!5.52e-11!18;CL:0002419!5.52e-11!18;CL:0000790!5.52e-11!18;CL:0002320!2.83e-10!365;CL:0000236!2.89e-09!14;CL:0000219!5.53e-09!390;CL:0000557!1.04e-08!71;CL:0002009!2.88e-08!65;CL:0000048!8.61e-08!430;CL:0002194!1.17e-07!63;CL:0000576!1.17e-07!63;CL:0000040!1.17e-07!63;CL:0000559!1.17e-07!63;CL:0000034!2.10e-07!444;CL:0000625!3.02e-07!11;CL:0000839!4.02e-07!70;CL:0000723!5.84e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000542;3.17e-20;53!CL:0000791;1.99e-18;18!CL:0000789;1.99e-18;18!CL:0002419;1.99e-18;18!CL:0000084;5.44e-18;25!CL:0000236;7.94e-15;13!CL:0000945;2.08e-12;24!CL:0000625;1.20e-11;11!CL:0002087;7.14e-11;104!CL:0000738;1.50e-10;136!CL:0000988;6.32e-10;177!CL:0000094;7.25e-10;8!CL:0000624;1.25e-07;6!CL:0000840;7.08e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.01e-54,168;CL:0000988,7.57e-52,177;CL:0000738,5.00e-50,136;CL:0002032,1.42e-47,161;CL:0000837,1.42e-47,161;CL:0002087,1.89e-42,115;CL:0002031,2.21e-36,120;CL:0000542,4.22e-33,53;CL:0000051,4.22e-33,53;CL:0000838,4.39e-32,52;CL:0000791,1.37e-18,18;CL:0000789,1.37e-18,18;CL:0002420,1.37e-18,18;CL:0002419,1.37e-18,18;CL:0000790,1.37e-18,18;CL:0000084,4.12e-18,25;CL:0000827,4.12e-18,25;CL:0000763,2.52e-17,108;CL:0000049,2.52e-17,108;CL:0000236,1.76e-15,14;CL:0000766,4.94e-14,72;CL:0000134,1.03e-13,354;CL:0002320,7.87e-13,361;CL:0000945,1.26e-12,24;CL:0000826,1.26e-12,24;CL:0000625,7.65e-12,11;CL:0002009,2.61e-11,61;CL:0000557,2.56e-10,67;CL:0002194,2.83e-10,59;CL:0000576,2.83e-10,59;CL:0000040,2.83e-10,59;CL:0000559,2.83e-10,59;CL:0000094,5.03e-10,8;CL:0000219,8.18e-10,386;CL:0000839,2.99e-08,66;CL:0000048,6.14e-08,427;CL:0000473,7.57e-08,48;CL:0000234,7.57e-08,48;CL:0000034,7.85e-08,441;CL:0000624,1.19e-07,6;CL:0000723,1.95e-07,433;CL:0002393,8.14e-07,9;CL:0002397,8.14e-07,9;CL:0000840,9.24e-07,5;CL:0001029,9.24e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000051;3.17e-20;53!CL:0000790;1.99e-18;18 | |||
|ontology_enrichment_disease=DOID:2531!1.60e-08!51;DOID:0060083!1.60e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.69e-08,51;DOID:0060083,1.69e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.10e-14!112;UBERON:0002390!3.05e-14!102;UBERON:0003061!3.05e-14!102;UBERON:0002384!1.16e-09!375;UBERON:0000178!2.01e-08!15;UBERON:0000179!2.01e-08!15;UBERON:0000463!2.01e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.58e-13;15!UBERON:0000179;1.58e-13;15!UBERON:0000463;1.58e-13;15!UBERON:0002390;2.04e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.09e-21,98;UBERON:0003061,1.09e-21,98;UBERON:0002193,6.81e-21,108;UBERON:0000178,1.09e-13,15;UBERON:0000179,1.09e-13,15;UBERON:0000463,1.09e-13,15;UBERON:0002384,2.09e-12,371;UBERON:0002405,3.70e-12,93;UBERON:0002371,1.37e-08,76;UBERON:0004177,3.00e-08,7;UBERON:0005057,3.00e-08,7;UBERON:0001474,2.79e-07,82;UBERON:0003081,6.92e-07,203 | |||
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| |||
|short_description=p5@GIT2 | |||
}} |
Revision as of 15:50, 11 January 2014
Short description: | p5@GIT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GIT2_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 5bp_to_ENST00000320063_5end |
EntrezGene: | GIT2 |
HGNC: | 4273 |
UniProt: | F8W822 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.09e-21 | 98 |
blood island | 1.09e-21 | 98 |
hemolymphoid system | 6.81e-21 | 108 |
blood | 1.09e-13 | 15 |
haemolymphatic fluid | 1.09e-13 | 15 |
organism substance | 1.09e-13 | 15 |
connective tissue | 2.09e-12 | 371 |
immune system | 3.70e-12 | 93 |
bone marrow | 1.37e-08 | 76 |
hemopoietic organ | 3.00e-08 | 7 |
immune organ | 3.00e-08 | 7 |
bone element | 2.79e-07 | 82 |
lateral plate mesoderm | 6.92e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.69e-08 | 51 |
immune system cancer | 1.69e-08 | 51 |