FFCP PHASE1:Hg19::chr12:105724613..105724666,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=387882 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=35164 | |||
|TSSclassifier=strong | |||
|UniProt=F8VQD4 | |||
|association_with_transcript=0bp_to_ENST00000546866,ENST00000549934_5end | |||
|coexpression_cluster_id=C3224 | |||
|description=CAGE_peak_2_at_C12orf75_5end | |||
|id=chr12:105724613..105724666,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.75e-16!180;CL:0000057!1.28e-15!75;CL:0002620!2.72e-11!23;CL:0000192!3.87e-10!42;CL:0000514!3.87e-10!42;CL:0000144!8.24e-10!625;CL:0002371!2.12e-09!591;CL:0000359!4.99e-09!32;CL:0000003!1.84e-08!722;CL:0000680!2.43e-08!57;CL:0000056!2.43e-08!57;CL:0000355!2.43e-08!57;CL:0000183!1.02e-07!59;CL:0000187!1.19e-07!54;CL:0000048!2.41e-07!430;CL:0000723!4.90e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.22e-11;23!CL:0000359;1.11e-08;32!CL:0000192;3.14e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.01e-16,76;CL:0002620,2.44e-11,23;CL:0000192,6.24e-10,43;CL:0000514,6.24e-10,43;CL:0000359,4.59e-09,32;CL:0000680,2.77e-08,58;CL:0000056,2.77e-08,58;CL:0000355,2.77e-08,58;CL:0000048,4.57e-08,427;CL:0000723,9.74e-08,433;CL:0000187,1.35e-07,55;CL:0000034,5.05e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;3.14e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.85e-13!83;UBERON:0002329!1.85e-13!83;UBERON:0003077!1.85e-13!83;UBERON:0003059!1.85e-13!83;UBERON:0007282!1.85e-13!83;UBERON:0009618!1.85e-13!83;UBERON:0007285!1.85e-13!83;UBERON:0005256!8.81e-11!143;UBERON:0004290!1.57e-10!70;UBERON:0000486!2.92e-10!82;UBERON:0003102!5.77e-09!95;UBERON:0002199!1.78e-08!45;UBERON:0002416!1.78e-08!45;UBERON:0002097!7.49e-08!40;UBERON:0001134!7.76e-08!61;UBERON:0002036!7.76e-08!61;UBERON:0003082!7.76e-08!61;UBERON:0002385!2.19e-07!63;UBERON:0001015!2.19e-07!63;UBERON:0000383!2.19e-07!63;UBERON:0004573!3.16e-07!33;UBERON:0004571!3.16e-07!33;UBERON:0001637!4.03e-07!42;UBERON:0003509!4.03e-07!42;UBERON:0004572!4.03e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;9.73e-07;33!UBERON:0004571;9.73e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,9.53e-11,78;UBERON:0007524,1.42e-10,73;UBERON:0002329,1.77e-10,71;UBERON:0003059,1.77e-10,71;UBERON:0007282,1.77e-10,71;UBERON:0004290,1.77e-10,71;UBERON:0009618,1.77e-10,71;UBERON:0003102,3.44e-10,99;UBERON:0003077,3.82e-10,72;UBERON:0007285,3.82e-10,72;UBERON:0000486,3.91e-10,83;UBERON:0002199,7.13e-09,46;UBERON:0002416,7.13e-09,46;UBERON:0002097,3.02e-08,41;UBERON:0001134,8.63e-08,62;UBERON:0002036,8.63e-08,62;UBERON:0003082,8.63e-08,62;UBERON:0002385,2.40e-07,64;UBERON:0001015,2.40e-07,64;UBERON:0000383,2.40e-07,64;UBERON:0004573,2.96e-07,33;UBERON:0004571,2.96e-07,33;UBERON:0003104,3.32e-07,160;UBERON:0009142,3.32e-07,160;UBERON:0001637,3.79e-07,42;UBERON:0003509,3.79e-07,42;UBERON:0004572,3.79e-07,42 | |||
|phase1_expression=25.9800082356896,18.8408461024065,11.6992155399656,77.0564397319104,23.241976910219,30.5318483435129,12.6649939084155,20.8467558230854,5.48489819219661,8.3549538410513,5.58240934377942,42.3776261932534,26.1129308446169,7.05468211872266,7.62213964174206,140.515955608421,135.606268805395,170.892561150645,135.15738526497,6.52541607806976,12.8520435483879,3.13454721478088,7.15589967827642,13.003070381924,11.8010081219115,16.7345358588013,17.7337273211883,17.3950826703231,12.9810211360138,62.9480212879429,14.3978994683951,0.919421224478927,2.10844143144775,2.21852406100073,1.08454080812422,2.70121541726101,12.9184193307333,7.20194031091441,9.82667792603694,11.2845652772243,0.895661896959697,3.2389366601898,1.80302897343931,0.872389432677388,0.377875943688809,0.485168122375632,0.697287110717054,0,0,0.863077176966451,0.256160706529101,0,1.03423704220986,0.645484683583826,4.06279459783025,0.752969358170419,0.545812300115692,0.898893937780338,0.612167784741805,0.641858054152187,0,0.329851300186716,0.598390972864896,0,0.870627715885752,0.56738522469114,0,0,0,0.217188844705117,2.42159801053347,1.47311054395026,0,0,0.425208599930087,0,0,0,0,0.285012743741249,0.99458338599545,0.182664153764634,5.27988733383968,3.82297027883492,8.00558328477199,3.84057200309856,7.20712776664822,6.8970292794538,3.30522436392431,2.86216126360609,1.1384259382189,6.45960908308033,2.6759125968766,5.28685314316103,18.4967825783907,24.2313357993071,8.06510057466716,15.7204305099666,12.9528944369691,27.0842122532899,3.91106719960308,2.36723902867367,13.6378709885538,75.4248793112625,37.4149502493043,40.319168814219,37.9125409271022,49.3151580943849,55.2752227129482,43.9049205291815,53.3355534326687,32.4579456023259,3.85545064221357,4.81573490561484,9.40819714244791,77.2769717197401,28.3583165265422,17.8686271650968,24.5429101258918,38.8649805475398,58.5975108470777,91.2433962670439,37.6437797694432,46.9710862936715,51.2215978864618,51.8542181976397,68.1536237444469,40.9261688746207,61.7786852259902,35.337154547403,2.43806866313962,0,1.15076305659177,41.9269416766097,20.5548543360715,20.1336661355545,6.36228757640879,7.78615792484217,4.91581049253153,10.6430110782031,7.72946114099509,7.66227591661619,6.19301990097322,8.15725774125745,0.324547393654683,0.522389211897802,0.132957960518865,265.678555476151,380.376615668785,411.574911473158,2.18638648103376,11.1830497363796,2.08284300964557,4.52246353539208,2.93649605346934,5.77747888074142,1.8809546988313,2.58416759169329,7.1153252537342,3.3472061276467,2.81980521976403,0.760272105718513,0.488124115096339,4.04429388380456,7.29127753093584,2.50039239195423,1.12264686313085,2.36484109014977,3.06633274931766,0,2.19842092716489,6.58902087180316,15.511210565933,3.48875241714027,45.7214195559693,64.7081914606003,22.9067882806869,6.3104056564739,35.1121698376373,8.97084160227691,10.6748995729705,18.500066131287,1.8672662123986,5.6578482269269,7.68270944633256,1.36221684880438,1.72852777344,24.1351074788811,43.0780906025842,13.1208518955223,105.959114511227,35.2303495931295,89.5157382355767,98.7369171116807,21.2320338105089,21.9873427988065,8.0594109317097,42.7681028621539,23.4903582814629,6.37112953356618,26.5888712472008,40.4006673489759,47.5450375513464,44.3302584774693,79.4549493794317,93.172289922902,19.5309476578576,9.86859993492183,49.332149814437,111.690514352111,135.2125529398,50.715395238264,119.643986445828,51.0128269290346,201.564555407112,66.1603222385764,218.940950597213,49.2245859776023,171.857160765173,48.9787552161,120.703261455649,481.796533724576,201.098862480238,21.2586938479627,57.8221775652569,14.0534251740612,0.121973706129595,0.397589304964456,0.929551542956147,1.7622379352613,1.51392510525377,0.36497735907583,37.5478877591558,39.237697229766,38.6777779786946,27.8620756819187,47.6440457901926,2.01121560067735,1.85443159085912,2.16909926895134,1.54411561825352,1.08939722046203,1.42362371466658,2.15730093056263,1.96221465125346,2.69323009862473,1.4763109092493,33.658025712827,6.173610169971,7.3504355692771,0,0,0.590789906681404,20.3073025730739,12.9137860470269,28.3086886992567,14.7065382447558,2.24803506515239,9.65078135151656,4.62942225792648,17.9194567920679,12.4792174233549,23.0930147240437,3.70977295920246,10.2145563985165,1.15493158208859,0.925971025153221,2.66355813128438,0,0.858486162094873,0,0.702012795417713,0.594524649154913,97.4831873462481,47.2029780238795,32.4664972685065,9.67232045190762,9.88155390947471,10.7347150166259,1.47798971368783,2.11316241631742,2.48793738648926,1.58531948758658,0.88369703398466,1.65094525159639,0.763976851116555,3.51652341630141,6.84289784090821,2.26220483947312,3.90445975197093,2.00078502841405,9.4190110850103,5.66748089483264,14.0809508776224,31.6715703606556,7.15312891703765,33.81211010224,67.5482816125571,153.931006628822,7.9734286021264,21.2773698034917,11.9889980557245,2.14466990487221,0,7.40916303102692,35.5052440880171,2.84313558994037,8.71147060226772,29.5410589518394,43.5766729300147,14.2961377390342,0,0,0,141.37866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| |||
|short_description=p2@C12orf75 | |||
}} |
Revision as of 15:38, 11 January 2014
Short description: | p2@C12orf75 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C12orf75_5end |
Coexpression cluster: | C3224_Fibroblast_Dendritic_basal_chronic_leiomyoma_Renal_Aortic |
Association with transcript: | 0bp_to_ENST00000546866, ENST00000549934_5end |
EntrezGene: | C12orf75 |
HGNC: | 35164 |
UniProt: | F8VQD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.01e-16 | 76 |
skin fibroblast | 2.44e-11 | 23 |
smooth muscle cell | 6.24e-10 | 43 |
smooth muscle myoblast | 6.24e-10 | 43 |
vascular associated smooth muscle cell | 4.59e-09 | 32 |
muscle precursor cell | 2.77e-08 | 58 |
myoblast | 2.77e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.77e-08 | 58 |
multi fate stem cell | 4.57e-08 | 427 |
somatic stem cell | 9.74e-08 | 433 |
muscle cell | 1.35e-07 | 55 |
stem cell | 5.05e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 9.53e-11 | 78 |
dense mesenchyme tissue | 1.42e-10 | 73 |
somite | 1.77e-10 | 71 |
presomitic mesoderm | 1.77e-10 | 71 |
presumptive segmental plate | 1.77e-10 | 71 |
dermomyotome | 1.77e-10 | 71 |
trunk paraxial mesoderm | 1.77e-10 | 71 |
surface structure | 3.44e-10 | 99 |
paraxial mesoderm | 3.82e-10 | 72 |
presumptive paraxial mesoderm | 3.82e-10 | 72 |
multilaminar epithelium | 3.91e-10 | 83 |
integument | 7.13e-09 | 46 |
integumental system | 7.13e-09 | 46 |
skin of body | 3.02e-08 | 41 |
skeletal muscle tissue | 8.63e-08 | 62 |
striated muscle tissue | 8.63e-08 | 62 |
myotome | 8.63e-08 | 62 |
muscle tissue | 2.40e-07 | 64 |
musculature | 2.40e-07 | 64 |
musculature of body | 2.40e-07 | 64 |
systemic artery | 2.96e-07 | 33 |
systemic arterial system | 2.96e-07 | 33 |
mesenchyme | 3.32e-07 | 160 |
entire embryonic mesenchyme | 3.32e-07 | 160 |
artery | 3.79e-07 | 42 |
arterial blood vessel | 3.79e-07 | 42 |
arterial system | 3.79e-07 | 42 |