FFCP PHASE1:Hg19::chr12:91502193..91502216,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1371 | |||
|description=CAGE_peak_at_chr12:91502193..91502216,- | |||
|id=chr12:91502193..91502216,- | |||
|ontology_enrichment_celltype=CL:0000057!1.87e-11!75;CL:0000055!4.60e-10!180;CL:0002620!9.98e-09!23;CL:0002334!6.52e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000153;7.77e-17;9!CL:0000447;7.77e-17;9!CL:0000499;4.05e-12;28!CL:0000135;9.58e-12;3!CL:0000388;9.58e-12;3!CL:0002504;6.53e-10;3!CL:1000279;6.53e-10;3!CL:1000280;6.53e-10;3!CL:0000214;6.53e-10;3!CL:0000327;1.09e-09;15!CL:0000138;3.50e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,7.22e-17,9;CL:0000447,7.22e-17,9;CL:0000499,3.81e-12,28;CL:0000135,9.66e-12,3;CL:0000388,9.66e-12,3;CL:0002504,2.26e-10,3;CL:1000279,2.26e-10,3;CL:1000280,2.26e-10,3;CL:0000214,6.68e-10,3;CL:0000327,1.05e-09,15;CL:0000058,3.23e-09,6;CL:0000138,3.23e-09,6;CL:0000136,2.71e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!6.85e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;5.39e-16;9!UBERON:0000042;5.39e-16;9!UBERON:0007846;9.58e-12;3!UBERON:0000043;9.58e-12;3!UBERON:0007845;9.58e-12;3!UBERON:0006915;6.53e-10;3!UBERON:0007616;6.53e-10;3!UBERON:0002217;6.53e-10;3!UBERON:0002018;6.53e-10;3!UBERON:0003688;1.86e-08;6!UBERON:0002358;1.86e-08;6!UBERON:0003684;1.86e-08;6!UBERON:0001178;1.86e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,9.66e-12,3;UBERON:0000043,9.66e-12,3;UBERON:0007845,9.66e-12,3;UBERON:0004457,1.73e-11,12;UBERON:0000042,1.73e-11,12;UBERON:0006915,6.68e-10,3;UBERON:0007616,6.68e-10,3;UBERON:0002217,6.68e-10,3;UBERON:0002018,6.68e-10,3;UBERON:0003688,3.70e-08,6;UBERON:0002358,3.70e-08,6;UBERON:0003684,3.70e-08,6;UBERON:0001178,3.70e-08,6 | |||
|phase1_expression=0.908391896352783,1.71280419112787,0.281908808191942,1.0007329835313,1.34088328328186,0.872338524100369,2.53299878168311,0,0.261185628199839,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,1.44575660953827,1.50401373190767,6.66293987219789,0,7.78615792484217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.96366342034382,0.12663051166458,0,0.573673241497627,0.354668382198357,0,0,0.49333509683432,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0.448346041655403,0.117434498643765,0,0.140450806702248,0,0,0,2.37600571456411,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0,0,0,0.150238058906597,0.113432183160021,1.25572744982203,2.56268866582281,0.211931901159562,0.300091096084402,0.515262646192195,2.57640540045629,0.37223371266318,0.337552664482532,0.0974370051611986,0.504867548488229,1.10459878370759,0.323292113637624,2.13005755509969,0.302256294682921,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0.643240938192885,0,0,0,0.591534000199219,0.842923450390509,0.723033089650446,1.21323370005633,0.871517776369625,0,0.674156540800822,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0.845302752556,0,0,0,0,0,0.57191197463259,1.62786481617433,0,0,0.355391948742546,0,0.301439377059586,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0.434343920002738,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.415941723061614,1.60586089917446,0.157702415033935,0.35142424497814,0.300946099727719,4.5481500811197,1.03473071292505,0,0.184369168541703,1.47702144595741,0,0,0,0,0,0,0,0.30239029332968,0.744323423456331,0.920771839728375,2.52594084989766,0.128139149255701,1.02341449813341,1.44768529029247,0,0.154209693802656,0.177561725313127,0.246381468041427,1.03850885836724,0.464841513839837,0,0,0,0.574072240823034,0.364182336013434,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0.915694648183434,0.495056999523528,0,0,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0.372158369359667,0.949138274156178,0.953150969619124,0,0,0,0,1.79872457583315,1.92175920815238,1.64937363283961,0,0,0,0,0,0,0.136499911407986,1.69686518344455,0,0,0,0,0,0.655894752046633,0,0,0,0.717056761020258,0.491245205065606,0,0,1.05553817648832,1.97576935775941,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,2.37571744666111,0,0,0,0,0,0,0.398495976502139,0.552567831062295,0,0,0,0.933118762985422,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0.227884111694002,0,0,0,2.55200927785536,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0,0.802577647298789,0,0,0,0,0.789168805698781,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0,0,0.0801588202515337,0.213452994739353,2.19790570540343,0,0.343609788497747,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,1.39641200636127,0.229160424011684,0,0.199679000498991,0,0,0.134366944973453,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0.35857467866569,0,0.714695326373367,0,0,0.542999601753713,3.45688596480507,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0.961086713109252,0.157204305099666,2.48543433208317,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0.298509605773748,0.701139929541673,0,0.378806010550178,0.754703705257725,1.77962244319307,0.457680136793847,0.151230923763239,0.310874401165561,0.147855149989634,0.159296767163702,0.449803112163605,0.310525913752519,0.829412415681711,0.53168342911599,0,0.751288044986092,1.90402606084398,0.406870733204662,0.909243296012797,0.429642228169954,0.928067519756987,0.796191777397232,0,2.74716564146234,2.69399591012735,0,0,0,0,0.680117776536817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0.850299680406731,0.619678821295011,0,0,0,0,2.1160556621441,3.3687002508852,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,1.19349733269765,0.451261970095544,0,0,0,0,0,0,0,0,0,0,0,1.98484471355718,0,0,0,0,0,0,1.1531308121143,0,0.685952037749674,0,0,0,0,0.235479278551542,0,0,1.82631744101899,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,3.4794432940146,18.4570177362473,0,0,0.83244063544298,0,0,0,0.0771741581079447,0.218559560503957,0,1.22574160876953,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0.730336388246517,0,0,1.26217249754548,0,0.436350690340377,1.0580536810308,8.18389039966853,8.7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| |||
|short_description=p@chr12:91502193..91502216,- | |||
}} |
Revision as of 15:08, 11 January 2014
Short description: | p@chr12:91502193..91502216, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:91502193..91502216, - |
Coexpression cluster: | C1371_tenocyte_Chondrocyte_placenta_Fibroblast_skin_mesenchymal_chorionic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 7.22e-17 | 9 |
carbohydrate secreting cell | 7.22e-17 | 9 |
stromal cell | 3.81e-12 | 28 |
fibrocyte | 9.66e-12 | 3 |
tendon cell | 9.66e-12 | 3 |
enteric smooth muscle cell | 2.26e-10 | 3 |
smooth muscle cell of large intestine | 2.26e-10 | 3 |
smooth muscle cell of colon | 2.26e-10 | 3 |
synovial cell | 6.68e-10 | 3 |
extracellular matrix secreting cell | 1.05e-09 | 15 |
chondroblast | 3.23e-09 | 6 |
chondrocyte | 3.23e-09 | 6 |
fat cell | 2.71e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 9.66e-12 | 3 |
tendon | 9.66e-12 | 3 |
regular connective tissue | 9.66e-12 | 3 |
cavity lining | 1.73e-11 | 12 |
serous membrane | 1.73e-11 | 12 |
stratified squamous epithelium | 6.68e-10 | 3 |
layer of synovial tissue | 6.68e-10 | 3 |
synovial joint | 6.68e-10 | 3 |
synovial membrane of synovial joint | 6.68e-10 | 3 |
omentum | 3.70e-08 | 6 |
peritoneum | 3.70e-08 | 6 |
abdominal cavity | 3.70e-08 | 6 |
visceral peritoneum | 3.70e-08 | 6 |