FFCP PHASE1:Hg19::chr12:89744460..89744485,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100131490 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt=Q6ZVP2 | |||
|association_with_transcript=-306bp_to_AK124265_5end | |||
|coexpression_cluster_id=C112 | |||
|description=CAGE_peak_3_at_LOC100131490_5end | |||
|id=chr12:89744460..89744485,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.24e-25!42;CL:0000860!6.65e-23!45;CL:0002194!5.01e-14!63;CL:0000576!5.01e-14!63;CL:0000040!5.01e-14!63;CL:0000559!5.01e-14!63;CL:0002009!3.51e-13!65;CL:0000839!7.43e-13!70;CL:0000557!1.76e-12!71;CL:0000766!1.53e-11!76;CL:0000763!5.16e-07!112;CL:0000049!5.16e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.70e-39;33!CL:0002057;2.70e-39;33!CL:0000473;9.75e-27;39!CL:0000234;9.75e-27;39!CL:0000576;1.23e-25;48!CL:0000766;6.32e-11;69!CL:0002545;4.29e-07;2!CL:0000763;4.68e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.20e-38,42;CL:0002057,2.20e-38,42;CL:0000473,2.07e-33,48;CL:0000234,2.07e-33,48;CL:0002194,1.94e-26,59;CL:0000576,1.94e-26,59;CL:0000040,1.94e-26,59;CL:0000559,1.94e-26,59;CL:0002009,1.55e-25,61;CL:0000839,1.61e-23,66;CL:0000557,3.75e-23,67;CL:0000766,1.83e-21,72;CL:0000763,7.37e-14,108;CL:0000049,7.37e-14,108;CL:0002087,6.32e-13,115;CL:0002031,2.52e-12,120;CL:0000738,1.08e-10,136;CL:0002032,8.71e-09,161;CL:0000837,8.71e-09,161;CL:0000037,2.36e-08,168;CL:0000988,7.62e-08,177;CL:0002545,3.93e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;6.46e-26;42!UBERON:0008801;6.42e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;6.42e-13;1!DOID:4549;6.42e-13;1!DOID:5861;6.42e-13;1!DOID:6496;6.42e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,9.73e-13,1;DOID:4549,9.73e-13,1;DOID:5861,9.73e-13,1;DOID:6496,9.73e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!6.82e-11!80;UBERON:0001474!5.01e-10!86;UBERON:0002390!7.96e-10!102;UBERON:0003061!7.96e-10!102;UBERON:0002193!1.21e-09!112;UBERON:0004765!5.55e-09!101;UBERON:0001434!5.55e-09!101;UBERON:0002405!3.20e-08!115;UBERON:0000467!4.33e-07!625;UBERON:0000480!5.30e-07!626;UBERON:0000922!8.62e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;6.42e-13;1!UBERON:0001567;6.42e-13;1!UBERON:0005800;4.29e-07;2!UBERON:0001829;4.29e-07;2!UBERON:0001515;4.29e-07;2!UBERON:0004089;4.29e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,5.01e-22,82;UBERON:0002371,2.86e-20,76;UBERON:0004765,6.05e-20,90;UBERON:0001434,8.36e-18,100;UBERON:0002405,2.53e-16,93;UBERON:0002390,2.03e-15,98;UBERON:0003061,2.03e-15,98;UBERON:0002193,7.37e-14,108;UBERON:0001831,4.77e-13,1;UBERON:0001567,4.77e-13,1;UBERON:0008801,4.77e-13,1;UBERON:0002204,5.27e-10,167;UBERON:0003081,6.25e-08,203;UBERON:0001829,3.70e-07,2;UBERON:0004089,3.70e-07,2;UBERON:0005800,3.93e-07,2;UBERON:0001515,3.93e-07,2 | |||
|phase1_expression=0,0.642301571672949,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.401088894940283,1.30206522429511,0,0,0,0.581592955118259,0,0.242584061187816,0.232429036905685,0,0.309706370895104,2.01384674625505,0.512321413058201,2.36482229888585,0.689491361473237,0,0,0.564727018627814,0.272906150057846,0.449446968890169,1.22433556948361,0.962787081228281,2.55734850319616,0.989553900560148,0.997318288108159,1.70489900213078,2.32167390902867,1.70215567407342,0.622822248995575,2.51248665256743,1.0429658368404,1.3031330682307,1.21079900526674,0.736555271975129,0.632924774881769,0.633765858935825,0,0.628975936525128,0.336985893439485,0.600707571366025,0.16072558669708,0,0.19891667719909,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0.328875809207352,0.276350017785848,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0.516833518338658,0,0,0,0,0,0.367663080345869,1.62028389576352,0.0892997282840798,0,0.112611480483322,0,0,0.549605231791222,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0.193260853163297,0,0.286804595389004,0,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.439001141634502,0,0.301586917234893,0.370353780634118,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0.492434012174795,0,0.594524649154913,0,0,0,0.179117045405697,0,0,0,0,0,0.144119953416961,0.37872730027914,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.387815147273333,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0.336255431980582,0,0,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532685175939381,0,0,0.116210378459959,0,0.40101294060657,0.0920809889358963,0,0,0.262248829918848,0.451199612907412,0.231046011313244,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0.330569830721956,0,0.255225424989168,0,0,0,0.6970372701606,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0.487426979262569,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0.281695602532241,0,0.196498082026242,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0.282431402330337,0.43050537267123,0,0.443430153536676,0.689170200620878,0,0,0.569647187174163,0.714695326373367,0.411362273086194,0,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0,0,0,0.211673582723883,0.324621940274555,0.280797178113459,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,4.85442086998054,0,0.284136146806413,0,0,0,0,0,0.222617410045812,0,0.211125408127993,0.19924798825107,0,0,0.102268682502155,0,0.311039587661807,0.0898683511473268,0,0.511572370226872,0.0986434056369336,0,0,0.969332746095218,0.371072392647405,0,0,0.262379999988587,0,0.568967241427498,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.126373159256976,0,0,0.664653872707185,0.661983911750998,0,0,0,0.138674673013139,0.347119476670262,0,0,0.34945333648406,0,0,0,0,0,1.1473296469895,0,0,0,0.316553979779393,0,0,0,0,0,16.4932698478919,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.13480708770837,0,0,0,0.136203406111576,0.160753148465019,0.412618309791701,0.83088067605837,0,0,0.364497339948148,0.670869375198532,0.315222829196793,0.209818352539992,0.422401346077626,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0.226624183040251,0.146552233678082,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0.7520696820681,0,0.327872630709804,0,0,0.366078794705889,0.1251909307065,0,0,0,0,0.249960815924213,0.303298235083296,0.285465333544967,0,0,0,0.149254802886874,0.467426619694449,0,0.189403005275089,0,0,0.228840068396924,0.302461847526478,0.15543720058278,0,0.159296767163702,0.899606224327209,0.621051827505038,0,0.265841714557995,0,0.300515217994437,0.380805212168795,0.406870733204662,0.363697318405119,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0.615349092722265,0,0.414943514785307,0.161475645631851,0,0,0.589848616738702,0,0.115525666150338,0,0,0,0,0,0,0,0,0.443568258651136,0.4052255077103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| |||
|short_description=p3@LOC100131490 | |||
}} |
Revision as of 15:03, 11 January 2014
Short description: | p3@LOC100131490 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOC100131490_5end |
Coexpression cluster: | C112_gastric_pancreas_temporal_duodenum_small_extraskeletal_adrenal |
Association with transcript: | -306bp_to_AK124265_5end |
EntrezGene: | LOC100131490 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.20e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.20e-38 | 42 |
defensive cell | 2.07e-33 | 48 |
phagocyte | 2.07e-33 | 48 |
monopoietic cell | 1.94e-26 | 59 |
monocyte | 1.94e-26 | 59 |
monoblast | 1.94e-26 | 59 |
promonocyte | 1.94e-26 | 59 |
macrophage dendritic cell progenitor | 1.55e-25 | 61 |
myeloid lineage restricted progenitor cell | 1.61e-23 | 66 |
granulocyte monocyte progenitor cell | 3.75e-23 | 67 |
myeloid leukocyte | 1.83e-21 | 72 |
myeloid cell | 7.37e-14 | 108 |
common myeloid progenitor | 7.37e-14 | 108 |
nongranular leukocyte | 6.32e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 2.52e-12 | 120 |
leukocyte | 1.08e-10 | 136 |
hematopoietic oligopotent progenitor cell | 8.71e-09 | 161 |
hematopoietic multipotent progenitor cell | 8.71e-09 | 161 |
hematopoietic stem cell | 2.36e-08 | 168 |
hematopoietic cell | 7.62e-08 | 177 |
thoracic aorta endothelial cell | 3.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone element | 5.01e-22 | 82 |
bone marrow | 2.86e-20 | 76 |
skeletal element | 6.05e-20 | 90 |
skeletal system | 8.36e-18 | 100 |
immune system | 2.53e-16 | 93 |
hematopoietic system | 2.03e-15 | 98 |
blood island | 2.03e-15 | 98 |
hemolymphoid system | 7.37e-14 | 108 |
parotid gland | 4.77e-13 | 1 |
cheek | 4.77e-13 | 1 |
parotid gland primordium | 4.77e-13 | 1 |
musculoskeletal system | 5.27e-10 | 167 |
lateral plate mesoderm | 6.25e-08 | 203 |
major salivary gland | 3.70e-07 | 2 |
midface | 3.70e-07 | 2 |
segment of aorta | 3.93e-07 | 2 |
thoracic aorta | 3.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.73e-13 | 1 |
extraosseous chondrosarcoma | 9.73e-13 | 1 |
myxoid chondrosarcoma | 9.73e-13 | 1 |
extraskeletal myxoid chondrosarcoma | 9.73e-13 | 1 |