FFCP PHASE1:Hg19::chr12:71031185..71031215,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5787 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9665 | |||
|TSSclassifier=strong | |||
|UniProt=F5H0Y4,Q6ZR19,F8VU56,F8VSD5 | |||
|association_with_transcript=0bp_to_ENST00000538174,ENST00000544694,ENST00000548122,ENST00000550358,ENST00000551525_5end | |||
|coexpression_cluster_id=C428 | |||
|description=CAGE_peak_1_at_PTPRB_5end | |||
|id=chr12:71031185..71031215,- | |||
|ontology_enrichment_celltype=CL:0002139!5.53e-29!24;CL:0000115!2.84e-26!35;CL:0000071!7.14e-22!18;CL:0002546!7.14e-22!18;CL:0002078!1.44e-19!44;CL:1000413!7.39e-12!9;CL:0000213!1.05e-11!57;CL:0000215!1.05e-11!57;CL:0005020!1.18e-08!6;CL:0002138!1.18e-08!6;CL:0005022!1.18e-08!6;CL:0002544!1.75e-08!6;CL:0002543!2.80e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.08e-32;24!CL:0000115;1.85e-26;36!CL:0000071;1.28e-24;18!CL:0002078;1.03e-14;45!CL:1000413;3.04e-13;9!CL:0000213;5.13e-10;58!CL:0000215;5.13e-10;58!CL:0002138;1.33e-09;6!CL:0002544;2.06e-09;6!CL:0002543;3.47e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.09e-32,24;CL:0000115,3.06e-31,36;CL:0000071,1.30e-24,18;CL:0002546,1.30e-24,18;CL:0002078,1.33e-22,45;CL:0000213,4.96e-15,58;CL:0000215,4.96e-15,58;CL:1000413,3.05e-13,9;CL:0005020,1.31e-09,6;CL:0002138,1.31e-09,6;CL:0005022,1.31e-09,6;CL:0002544,2.05e-09,6;CL:0002543,3.48e-09,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.28e-24;18!CL:0005022;1.33e-09;6!UBERON:0006601;1.43e-07;82!UBERON:0004872;6.02e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.24e-61!115;UBERON:0004111!5.19e-31!241;UBERON:0000025!1.47e-28!194;UBERON:0000477!5.10e-27!286;UBERON:0001049!1.10e-25!57;UBERON:0005068!1.10e-25!57;UBERON:0006241!1.10e-25!57;UBERON:0007135!1.10e-25!57;UBERON:0003080!7.02e-22!42;UBERON:0001986!7.14e-22!18;UBERON:0004638!7.14e-22!18;UBERON:0004852!7.14e-22!18;UBERON:0002780!5.34e-21!41;UBERON:0001890!5.34e-21!41;UBERON:0006240!5.34e-21!41;UBERON:0002616!1.12e-20!59;UBERON:0003075!8.56e-19!86;UBERON:0007284!8.56e-19!86;UBERON:0001017!4.74e-18!82;UBERON:0000955!5.46e-18!69;UBERON:0006238!5.46e-18!69;UBERON:0005743!1.46e-17!86;UBERON:0002346!3.24e-17!90;UBERON:0002020!4.96e-17!34;UBERON:0003528!4.96e-17!34;UBERON:0001893!8.91e-17!34;UBERON:0000487!1.53e-16!22;UBERON:0002791!2.98e-16!33;UBERON:0001869!1.06e-15!32;UBERON:0000073!4.62e-15!94;UBERON:0001016!4.62e-15!94;UBERON:0000483!6.64e-15!309;UBERON:0000119!1.88e-14!312;UBERON:0002619!5.14e-14!22;UBERON:0006914!1.06e-13!25;UBERON:0001950!1.00e-12!20;UBERON:0003056!1.31e-12!61;UBERON:0003915!7.39e-12!9;UBERON:0004700!7.39e-12!9;UBERON:0001917!7.39e-12!9;UBERON:0000956!1.22e-11!25;UBERON:0000203!1.22e-11!25;UBERON:0000055!1.60e-11!69;UBERON:0000468!3.43e-11!659;UBERON:0000467!6.57e-11!625;UBERON:0000480!8.19e-11!626;UBERON:0000153!1.05e-10!129;UBERON:0007811!1.05e-10!129;UBERON:0004872!3.81e-10!84;UBERON:0000033!1.71e-09!123;UBERON:0003914!4.61e-09!118;UBERON:0002049!1.15e-08!79;UBERON:0007798!1.15e-08!79;UBERON:0001981!2.15e-08!60;UBERON:0007500!2.15e-08!60;UBERON:0004537!2.15e-08!60;UBERON:0006965!2.15e-08!60;UBERON:0000481!2.48e-08!347;UBERON:0000922!2.91e-08!612;UBERON:0001009!3.85e-08!113;UBERON:0004121!7.66e-08!169;UBERON:0002050!1.18e-07!605;UBERON:0005423!1.18e-07!605;UBERON:0002465!2.07e-07!10;UBERON:0003103!2.46e-07!69;UBERON:0000924!2.63e-07!173;UBERON:0006601!2.63e-07!173;UBERON:0000923!2.68e-07!604;UBERON:0005291!2.68e-07!604;UBERON:0006598!2.68e-07!604;UBERON:0002532!2.68e-07!604;UBERON:0000064!4.81e-07!219;UBERON:0002308!4.86e-07!9;UBERON:0000125!4.86e-07!9;UBERON:0004535!4.99e-07!110;UBERON:0002298!6.13e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.28e-24;18!UBERON:0001986;1.28e-24;18!UBERON:0004852;1.28e-24;18!UBERON:0000487;7.23e-19;22!UBERON:0007023;9.36e-17;114!UBERON:0006914;8.62e-16;25!UBERON:0002780;4.03e-14;41!UBERON:0001890;4.03e-14;41!UBERON:0003915;3.04e-13;9!UBERON:0004700;3.04e-13;9!UBERON:0001917;3.04e-13;9!UBERON:0000073;1.53e-12;53!UBERON:0002616;1.53e-12;53!UBERON:0003528;3.35e-12;34!UBERON:0002020;3.35e-12;34!UBERON:0001893;5.74e-12;34!UBERON:0002791;9.54e-12;32!UBERON:0001869;9.87e-12;32!UBERON:0002619;1.42e-10;22!UBERON:0000490;1.02e-09;33!UBERON:0001950;3.52e-09;20!UBERON:0000956;8.31e-09;25!UBERON:0000203;8.31e-09;25!UBERON:0002465;2.40e-08;10!UBERON:0000125;8.52e-08;9!UBERON:0002308;8.52e-08;9!UBERON:0001638;1.82e-07;9!UBERON:0003920;1.82e-07;9!UBERON:0004582;1.82e-07;9!UBERON:0001017;3.09e-07;75!UBERON:0000055;3.99e-07;65!UBERON:0000955;5.75e-07;68!UBERON:0001473;7.73e-07;8!UBERON:0004536;7.73e-07;8!UBERON:0006558;7.73e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.63e-64,114;UBERON:0004111,2.48e-30,240;UBERON:0000025,1.10e-26,192;UBERON:0004638,1.30e-24,18;UBERON:0001986,1.30e-24,18;UBERON:0004852,1.30e-24,18;UBERON:0001049,1.68e-23,56;UBERON:0005068,1.68e-23,56;UBERON:0006241,1.68e-23,56;UBERON:0007135,1.68e-23,56;UBERON:0000073,1.38e-21,53;UBERON:0002616,1.38e-21,53;UBERON:0000487,7.34e-19,22;UBERON:0002780,9.43e-19,41;UBERON:0001890,9.43e-19,41;UBERON:0003080,9.43e-19,41;UBERON:0006240,9.43e-19,41;UBERON:0003075,2.20e-16,82;UBERON:0007284,2.20e-16,82;UBERON:0006914,8.73e-16,25;UBERON:0000955,8.81e-16,68;UBERON:0006238,8.81e-16,68;UBERON:0001017,1.25e-15,81;UBERON:0002346,5.27e-15,86;UBERON:0003528,1.94e-14,34;UBERON:0002020,1.94e-14,34;UBERON:0010314,3.38e-14,132;UBERON:0001893,3.43e-14,34;UBERON:0003915,3.05e-13,9;UBERON:0004700,3.05e-13,9;UBERON:0001917,3.05e-13,9;UBERON:0000483,3.93e-13,306;UBERON:0002791,4.77e-13,32;UBERON:0001869,4.97e-13,32;UBERON:0000055,5.46e-13,68;UBERON:0001016,8.09e-13,89;UBERON:0000119,9.47e-13,309;UBERON:0011216,1.39e-11,223;UBERON:0004872,4.58e-11,83;UBERON:0010371,5.50e-11,104;UBERON:0003056,1.13e-10,61;UBERON:0002619,1.59e-10,22;UBERON:0002049,5.46e-10,78;UBERON:0007798,5.46e-10,78;UBERON:0003914,1.97e-09,117;UBERON:0001009,2.27e-09,112;UBERON:0007500,2.55e-09,59;UBERON:0001981,2.55e-09,59;UBERON:0004537,2.55e-09,59;UBERON:0006965,2.55e-09,59;UBERON:0001950,3.60e-09,20;UBERON:0002050,5.15e-09,564;UBERON:0000923,7.60e-09,560;UBERON:0010316,7.60e-09,560;UBERON:0005291,7.60e-09,560;UBERON:0006598,7.60e-09,560;UBERON:0010317,7.60e-09,560;UBERON:0002532,7.60e-09,560;UBERON:0000956,9.11e-09,25;UBERON:0000203,9.11e-09,25;UBERON:0000922,9.78e-09,592;UBERON:0005423,1.18e-08,581;UBERON:0002465,2.43e-08,10;UBERON:0004535,4.41e-08,109;UBERON:0000125,8.84e-08,9;UBERON:0002308,8.84e-08,9;UBERON:0001638,1.81e-07,9;UBERON:0003920,1.81e-07,9;UBERON:0004582,1.81e-07,9;UBERON:0003103,4.39e-07,68;UBERON:0001473,7.67e-07,8;UBERON:0004536,7.67e-07,8;UBERON:0006558,7.67e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,2.04580098949649,0,0,0,0,0,0,0,0,9.82343066232845,0,0,0,0,0,0,0,0,90.8344201665842,33.5491492091389,69.4281003215189,59.357333902021,59.1494205055967,49.7963655911522,57.8916057306965,118.871709217891,111.35484022094,221.585045650212,68.0781545914458,42.5752379202367,51.7411562002119,61.0320713374142,52.6592266123144,76.2619679546041,47.3756976241218,30.742934171947,44.4618248651061,69.2963931484734,41.0371906404112,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,4.71487352243908,1.63461903113459,0,0,0,0,6.27519003698894,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.453728732640084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.7905918245965,12.6217596423101,0.4115740113314,0,1.26755034821831,3.9313088667105,32.4934448674772,0,0,0,0,0,0,0,0,0,0,0,0,71.4613916417315,51.8543774085804,51.7491294078107,0,0,0,0,0,0,0,0,0,0,0.383382679165211,2.95597942737566,1.93706554829097,1.65862492432618,2.88239906833923,3.40854570251226,0,0,0,0,0,0,0,0,0,0,0,0,2.535908257668,0,0,0,0,0,0,0,0,0.977208552881205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.4333460177242,23.8131187387122,22.0234234424182,55.5218109685042,0,0,0,0.831076008928724,0,0,0,0,0,0,14.5287826423288,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,2.7723022215848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,16.6634527374899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5745161103971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,4.8682022125677,0,0,0,27.690045882388,0,0.111443384277478,0,0.23874448473769,0,0,0.994147647766298,1.54736358051564,0,0,0,8.36841550654493,5.8019622261541,0,0,0,0,0,0,0,8.87790650732403,0,0,0,2.22643435588443,3.99227596002388,0,0,13.7749919332611,0,0,0,0,0,0,3.54296554325536,2.77371808838438,0,2.76448149828062,1.77328571372128,2.19385397153973,0,0,12.3120413606075,0,0,0,0,2.23300811812344,0,15.4580085045404,0,0,0,0,0,0,0,0,0,0,0,0,3.98104772431402,6.63431733775044,6.11030144933625,0,0,0,2.22423738836234,7.2231988256891,3.04543779442941,0,0,0,10.6537788769335,4.83962864194656,0.61214552326098,11.6263306516418,0,0,0,0,0,0,0,0,0,0,0,9.78469342155369,0,0,0,0,6.20729705525884,38.9209518709516,9.0392296312213,0,0,1.7727022867646,0,0,7.68430781061669,0,0,0,0,0,0,0,0.135904206073614,0,0,0,2.40168115483916,6.43455280792367,0,0,0,25.1354161145029,14.6662671367478,49.5332386958002,5.39133301347276,5.57993862577542,4.24025769139558,23.6485823153276,0,0,0,0,0,0,0,3.18091875923721,4.08610218334727,0,0,0,0,0,2.42998226632099,0,17.0220327766268,20.6146531370543,0,0,0,12.1498205483472,7.28301167401975,0,0,0,0,0,0.082092520749339,0,0,10.5517608248219,10.6005511129777,3.74920573448497,4.09921065402339,0,0,24.4543174780021,30.0260222740362,25.2685823761789,4.46549419630756,0,0,0,4.35214242695579,14.5400138533166,7.35229384232308,3.60659893780785,0,0.886068179966986,2.92863035764712,5.13282815896649,4.0138643698305,2.77322628842131,3.53949496765886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04168559533808,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0.109209638192014,0,0,0,0,0,0,0.80057074828547,0,0,2.56916900385838,1.41696576325585,4.94864963077169,1.23069818544453,1.26035848110859,0.96820153449905,3.39098855826887,0,0,0,0,0,0,0,0,8.34834644676756,0,2.34454203369928,0,0,0,2.09366512317023,1.56215619722769,5.1671699125296,1.9024743058172,3.28184885410932,3.28954660114309,15.8787577084574,0,0,1.07140367175657,2.01770233331294,2.42786241694653,7.96817669729542,14.0149744856969,0,0,4.41803264349406,1.71009211263408,0,0,8.00629547075243,2.04250266890802,0,10.9579046461139,0,0,16.9399409698676,0,0,0,0,0,0,0,1.29068207646083,0,0,6.77419280305486,0,0,0,0,0,0,3.88457302312737,6.87840805936855,13.9177731760584,9.71421986118279,0,0,0,0,0,0.150962843566674,3.08696632431779,3.49695296806332,0,5.14811475683202,0,1.96308467114945,1.48523200163543,5.4945244585842,0.169927114687817,46.0521198101283,79.2187443195264,0,0,0,0,7.30336388246517,2.2936464170227,2.29343333042322,0,2.10773619591836,2.61810414204226,8.99345628876181,0,0,0,0,0,0,0,0,0.0918948995348449,0,5.75918106458619,2.94760543171796,4.1458471972939,2.99955687999496,7.88965733033629,13.8077370248969,0.710478008196067,4.53145414359763,0,10.6290754324535,13.1376172822843,10.2326871511572,9.58253243038787,3.36760265072938,8.03288700397975,11.3104521225645,0,0,0,0,4.69281884806909,23.1036329505618,19.9379127374712,17.3096761288233,8.65477312441413,0 | |||
|short_description=p1@PTPRB | |||
}} |
Revision as of 14:39, 11 January 2014
Short description: | p1@PTPRB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PTPRB_5end |
Coexpression cluster: | C428_Endothelial_Renal_Lymphatic_Hepatic_adipose_heart_breast |
Association with transcript: | 0bp_to_ENST00000538174, ENST00000544694, ENST00000548122, ENST00000550358, ENST00000551525_5end |
EntrezGene: | PTPRB |
HGNC: | 9665 |
UniProt: | F5H0Y4Q6ZR19F8VU56F8VSD5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.09e-32 | 24 |
endothelial cell | 3.06e-31 | 36 |
blood vessel endothelial cell | 1.30e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.30e-24 | 18 |
meso-epithelial cell | 1.33e-22 | 45 |
lining cell | 4.96e-15 | 58 |
barrier cell | 4.96e-15 | 58 |
endothelial cell of artery | 3.05e-13 | 9 |
lymphangioblast | 1.31e-09 | 6 |
endothelial cell of lymphatic vessel | 1.31e-09 | 6 |
vascular lymphangioblast | 1.31e-09 | 6 |
aortic endothelial cell | 2.05e-09 | 6 |
vein endothelial cell | 3.48e-09 | 6 |