FFCP PHASE1:Hg19::chr12:56843161..56843225,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8914 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11813 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UNS1,E7EWS5 | |||
|association_with_transcript=0bp_to_ENST00000229201,ENST00000553532,ENST00000554616,NM_003920,uc001slf.2,uc001slg.2_5end | |||
|coexpression_cluster_id=C281 | |||
|description=CAGE_peak_1_at_TIMELESS_5end | |||
|id=chr12:56843161..56843225,- | |||
|ontology_enrichment_celltype=CL:0000066!8.01e-20!254;CL:0000333!1.43e-08!41;CL:0000548!2.94e-08!679;CL:0000004!2.94e-08!679;CL:0000255!2.94e-08!679;CL:0000133!3.31e-08!59;CL:0000012!3.75e-08!682;CL:0002319!6.19e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;7.14e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.73e-20,253;CL:0000333,1.43e-08,41;CL:0000133,3.31e-08,59;CL:0002319,6.18e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.60e-47!235;DOID:14566!9.61e-46!239;DOID:0050687!1.84e-26!143;DOID:0050686!7.58e-23!137;DOID:305!1.80e-20!106;DOID:2531!6.93e-19!51;DOID:0060083!6.93e-19!51;DOID:1240!1.45e-14!39;DOID:8692!2.01e-10!31;DOID:3095!2.67e-07!22;DOID:2994!2.67e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:2531;1.20e-11;51!DOID:0060083;1.20e-11;51!DOID:1240;1.73e-11;39!DOID:8692;2.60e-10;31!DOID:305;4.39e-08;106!DOID:3095;2.72e-07;22!DOID:2994;2.72e-07;22!DOID:0050687;8.33e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.57e-47,235;DOID:14566,9.50e-46,239;DOID:0050687,1.83e-26,143;DOID:0050686,7.53e-23,137;DOID:305,1.79e-20,106;DOID:2531,6.90e-19,51;DOID:0060083,6.90e-19,51;DOID:1240,1.44e-14,39;DOID:8692,2.01e-10,31;DOID:3095,2.66e-07,22;DOID:2994,2.66e-07,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@TIMELESS | |||
}} |
Revision as of 14:02, 11 January 2014
Short description: | p1@TIMELESS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TIMELESS_5end |
Coexpression cluster: | C281_Hodgkin_Reticulocytes_chronic_NK_acute_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000229201, ENST00000553532, ENST00000554616, NM_003920, uc001slf.2, uc001slg.2_5end |
EntrezGene: | TIMELESS |
HGNC: | 11813 |
UniProt: | Q9UNS1E7EWS5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.73e-20 | 253 |
migratory neural crest cell | 1.43e-08 | 41 |
neurectodermal cell | 3.31e-08 | 59 |
neural cell | 6.18e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.57e-47 | 235 |
disease of cellular proliferation | 9.50e-46 | 239 |
cell type cancer | 1.83e-26 | 143 |
organ system cancer | 7.53e-23 | 137 |
carcinoma | 1.79e-20 | 106 |
hematologic cancer | 6.90e-19 | 51 |
immune system cancer | 6.90e-19 | 51 |
leukemia | 1.44e-14 | 39 |
myeloid leukemia | 2.01e-10 | 31 |
germ cell and embryonal cancer | 2.66e-07 | 22 |
germ cell cancer | 2.66e-07 | 22 |