FFCP PHASE1:Hg19::chr12:56109908..56109919,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2647 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4200 | |||
|TSSclassifier=strong | |||
|UniProt=P78537 | |||
|association_with_transcript=88bp_to_ENST00000257899,uc001shi.2_5end | |||
|description=CAGE_peak_5_at_BLOC1S1_5end | |||
|id=chr12:56109908..56109919,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.32e-11!180;CL:0000222!6.31e-09!119;CL:0000548!2.37e-08!679;CL:0000004!2.37e-08!679;CL:0000255!2.37e-08!679;CL:0000012!2.76e-08!682;CL:0000144!8.90e-08!625;CL:0002371!2.52e-07!591;CL:0000183!3.47e-07!59;CL:0002321!4.26e-07!248;CL:0000220!5.28e-07!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.15e-09,121;CL:0002321,2.74e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.69e-08!83;UBERON:0002329!8.69e-08!83;UBERON:0003077!8.69e-08!83;UBERON:0003059!8.69e-08!83;UBERON:0007282!8.69e-08!83;UBERON:0009618!8.69e-08!83;UBERON:0007285!8.69e-08!83;UBERON:0004290!8.18e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0001801;3.87e-07;14!UBERON:0002104;4.64e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.82e-08,78;UBERON:0001801,2.58e-07,14;UBERON:0002329,5.09e-07,71;UBERON:0003059,5.09e-07,71;UBERON:0007282,5.09e-07,71;UBERON:0004290,5.09e-07,71;UBERON:0009618,5.09e-07,71;UBERON:0000970,5.95e-07,21;UBERON:0002104,5.95e-07,21;UBERON:0001456,6.92e-07,22;UBERON:0000019,7.28e-07,20;UBERON:0000047,7.28e-07,20;UBERON:0010312,7.28e-07,20;UBERON:0004088,7.28e-07,20;UBERON:0010230,7.28e-07,20;UBERON:0003072,7.28e-07,20;UBERON:0004128,7.28e-07,20;UBERON:0003071,7.28e-07,20;UBERON:0007524,7.42e-07,73 | |||
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| |||
|short_description=p5@BLOC1S1 | |||
}} |
Revision as of 13:54, 11 January 2014
Short description: | p5@BLOC1S1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BLOC1S1_5end |
Coexpression cluster: | NA |
Association with transcript: | 88bp_to_ENST00000257899, uc001shi.2_5end |
EntrezGene: | BLOC1S1 |
HGNC: | 4200 |
UniProt: | P78537 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.15e-09 | 121 |
embryonic cell | 2.74e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 2.82e-08 | 78 |
anterior segment of eyeball | 2.58e-07 | 14 |
somite | 5.09e-07 | 71 |
presomitic mesoderm | 5.09e-07 | 71 |
presumptive segmental plate | 5.09e-07 | 71 |
dermomyotome | 5.09e-07 | 71 |
trunk paraxial mesoderm | 5.09e-07 | 71 |
eye | 5.95e-07 | 21 |
visual system | 5.95e-07 | 21 |
face | 6.92e-07 | 22 |
camera-type eye | 7.28e-07 | 20 |
simple eye | 7.28e-07 | 20 |
immature eye | 7.28e-07 | 20 |
ocular region | 7.28e-07 | 20 |
eyeball of camera-type eye | 7.28e-07 | 20 |
optic cup | 7.28e-07 | 20 |
optic vesicle | 7.28e-07 | 20 |
eye primordium | 7.28e-07 | 20 |
dense mesenchyme tissue | 7.42e-07 | 73 |