FFCP PHASE1:Hg19::chr12:49580194..49580236,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7846 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=20766 | |||
|TSSclassifier=not | |||
|UniProt=Q71U36 | |||
|association_with_transcript=-54bp_to_K00557_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_5_at_TUBA1A_5end | |||
|id=chr12:49580194..49580236,- | |||
|ontology_enrichment_celltype=CL:0000055!9.52e-14!180;CL:0000393!8.42e-10!60;CL:0000211!8.42e-10!60;CL:0000680!4.17e-09!57;CL:0000056!4.17e-09!57;CL:0000355!4.17e-09!57;CL:0000133!1.54e-08!59;CL:0000183!3.96e-08!59;CL:0000187!4.73e-08!54;CL:0000192!8.74e-08!42;CL:0000514!8.74e-08!42;CL:0000222!2.52e-07!119;CL:0000221!4.10e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000393;2.97e-07;61!CL:0000211;2.97e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.80e-11,61;CL:0000211,1.80e-11,61;CL:0000680,5.30e-10,58;CL:0000056,5.30e-10,58;CL:0000355,5.30e-10,58;CL:0000187,2.05e-08,55;CL:0000192,3.27e-08,43;CL:0000514,3.27e-08,43;CL:0000133,3.48e-08,59;CL:0000222,8.82e-08,121;CL:0000047,1.05e-07,8;CL:0002321,6.71e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.15e-15!82;UBERON:0005743!2.35e-15!86;UBERON:0000073!9.08e-15!94;UBERON:0001016!9.08e-15!94;UBERON:0000914!5.93e-13!83;UBERON:0002329!5.93e-13!83;UBERON:0003077!5.93e-13!83;UBERON:0003059!5.93e-13!83;UBERON:0007282!5.93e-13!83;UBERON:0009618!5.93e-13!83;UBERON:0007285!5.93e-13!83;UBERON:0004290!4.82e-12!70;UBERON:0001049!1.10e-11!57;UBERON:0005068!1.10e-11!57;UBERON:0006241!1.10e-11!57;UBERON:0007135!1.10e-11!57;UBERON:0000955!4.66e-11!69;UBERON:0006238!4.66e-11!69;UBERON:0000483!8.10e-11!309;UBERON:0000119!1.06e-10!312;UBERON:0002616!1.82e-10!59;UBERON:0002346!2.10e-10!90;UBERON:0000475!2.74e-10!365;UBERON:0003075!3.10e-10!86;UBERON:0007284!3.10e-10!86;UBERON:0000924!1.04e-09!173;UBERON:0006601!1.04e-09!173;UBERON:0004121!1.78e-09!169;UBERON:0002385!2.00e-09!63;UBERON:0001015!2.00e-09!63;UBERON:0000383!2.00e-09!63;UBERON:0001134!3.14e-09!61;UBERON:0002036!3.14e-09!61;UBERON:0003082!3.14e-09!61;UBERON:0000486!1.87e-08!82;UBERON:0000033!3.52e-08!123;UBERON:0000025!4.23e-08!194;UBERON:0005256!4.75e-08!143;UBERON:0000468!6.63e-08!659;UBERON:0000153!9.44e-08!129;UBERON:0007811!9.44e-08!129;UBERON:0003056!1.01e-07!61;UBERON:0000467!1.16e-07!625;UBERON:0000480!1.71e-07!626;UBERON:0003080!3.55e-07!42;UBERON:0002020!5.02e-07!34;UBERON:0003528!5.02e-07!34;UBERON:0002780!5.06e-07!41;UBERON:0001890!5.06e-07!41;UBERON:0006240!5.06e-07!41;UBERON:0001637!6.27e-07!42;UBERON:0003509!6.27e-07!42;UBERON:0004572!6.27e-07!42;UBERON:0000922!6.98e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;1.07e-10;31!UBERON:0001015;1.07e-10;31!UBERON:0000383;1.07e-10;31!UBERON:0001135;5.75e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.47e-14,73;UBERON:0007503,1.75e-14,78;UBERON:0002329,3.46e-14,71;UBERON:0003059,3.46e-14,71;UBERON:0007282,3.46e-14,71;UBERON:0004290,3.46e-14,71;UBERON:0009618,3.46e-14,71;UBERON:0001016,4.80e-14,89;UBERON:0003077,8.01e-14,72;UBERON:0007285,8.01e-14,72;UBERON:0001017,1.58e-13,81;UBERON:0000483,1.58e-12,306;UBERON:0000119,3.80e-12,309;UBERON:0002385,7.88e-11,64;UBERON:0001015,7.88e-11,64;UBERON:0000383,7.88e-11,64;UBERON:0005256,9.27e-11,122;UBERON:0001134,1.24e-10,62;UBERON:0002036,1.24e-10,62;UBERON:0003082,1.24e-10,62;UBERON:0000486,1.85e-10,83;UBERON:0004121,4.41e-10,171;UBERON:0000924,4.41e-10,171;UBERON:0006601,4.41e-10,171;UBERON:0000922,4.63e-10,592;UBERON:0001049,6.33e-10,56;UBERON:0005068,6.33e-10,56;UBERON:0006241,6.33e-10,56;UBERON:0007135,6.33e-10,56;UBERON:0005423,1.02e-09,581;UBERON:0000923,1.06e-09,560;UBERON:0010316,1.06e-09,560;UBERON:0005291,1.06e-09,560;UBERON:0006598,1.06e-09,560;UBERON:0010317,1.06e-09,560;UBERON:0002532,1.06e-09,560;UBERON:0002050,2.30e-09,564;UBERON:0000490,3.84e-09,148;UBERON:0002346,8.56e-09,86;UBERON:0010314,1.53e-08,132;UBERON:0000025,1.74e-08,192;UBERON:0003075,2.09e-08,82;UBERON:0007284,2.09e-08,82;UBERON:0001135,3.72e-08,15;UBERON:0000073,4.92e-08,53;UBERON:0002616,4.92e-08,53;UBERON:0003104,6.09e-08,160;UBERON:0009142,6.09e-08,160;UBERON:0000955,1.99e-07,68;UBERON:0006238,1.99e-07,68;UBERON:0010371,2.07e-07,104;UBERON:0001637,3.19e-07,42;UBERON:0003509,3.19e-07,42;UBERON:0004572,3.19e-07,42;UBERON:0004111,8.48e-07,240 | |||
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| |||
|short_description=p5@TUBA1A | |||
}} |
Revision as of 13:18, 11 January 2014
Short description: | p5@TUBA1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TUBA1A_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -54bp_to_K00557_5end |
EntrezGene: | TUBA1A |
HGNC: | 20766 |
UniProt: | Q71U36 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.80e-11 | 61 |
electrically active cell | 1.80e-11 | 61 |
muscle precursor cell | 5.30e-10 | 58 |
myoblast | 5.30e-10 | 58 |
multi-potent skeletal muscle stem cell | 5.30e-10 | 58 |
muscle cell | 2.05e-08 | 55 |
smooth muscle cell | 3.27e-08 | 43 |
smooth muscle myoblast | 3.27e-08 | 43 |
neurectodermal cell | 3.48e-08 | 59 |
mesodermal cell | 8.82e-08 | 121 |
neuronal stem cell | 1.05e-07 | 8 |
embryonic cell | 6.71e-07 | 250 |