FFCP PHASE1:Hg19::chr12:47617314..47617338,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91523 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28255 | |||
|TSSclassifier=strong | |||
|UniProt=F8VYL8 | |||
|association_with_transcript=0bp_to_ENST00000551777_5end | |||
|description=CAGE_peak_5_at_FAM113B_5end | |||
|id=chr12:47617314..47617338,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.31e-12;7!CL:0000586;2.31e-12;7!CL:0002174;5.73e-07;1!CL:1001319;5.73e-07;1!CL:1000600;5.73e-07;1!CL:0000501;5.73e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.08e-12,7;CL:0000586,3.08e-12,7;CL:1001319,5.26e-07,1;CL:1000600,5.26e-07,1;CL:0002174,6.24e-07,1;CL:0000501,6.24e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.57e-26;10!UBERON:0005564;4.57e-26;10 | |||
|ontology_enrichment_disease=DOID:2394!8.70e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.26e-16;8!DOID:4929;9.66e-13;2!DOID:8692;9.13e-08;31!DOID:5662;5.73e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.07e-16,8;DOID:4929,9.68e-13,2;DOID:162,3.97e-11,235;DOID:14566,8.85e-11,239;DOID:305,2.18e-08,106;DOID:8692,1.04e-07,31;DOID:5662,5.57e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004176!5.53e-16!22;UBERON:0000991!5.02e-15!21;UBERON:0009196!5.02e-15!21;UBERON:0009117!5.02e-15!21;UBERON:0005564!5.02e-15!21;UBERON:0005156!9.01e-13!59;UBERON:0000990!9.01e-13!59;UBERON:0002323!1.77e-11!46;UBERON:0003133!1.03e-10!48;UBERON:0004458!2.45e-10!49;UBERON:0000992!1.59e-09!13;UBERON:0005911!1.37e-08!82;UBERON:0003929!1.40e-08!54;UBERON:0000466!4.72e-08!126;UBERON:0003886!5.11e-08!63;UBERON:0003101!7.75e-08!22;UBERON:0000079!7.75e-08!22;UBERON:0009497!1.15e-07!25;UBERON:0000015!1.15e-07!25;UBERON:0002423!1.15e-07!25;UBERON:0006235!1.15e-07!25;UBERON:0004161!1.15e-07!25;UBERON:0000473!4.42e-07!8;UBERON:0002294!8.29e-07!7;UBERON:0001173!8.29e-07!7;UBERON:0004912!8.29e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.63e-24;8!UBERON:0000991;1.91e-19;21!UBERON:0003135;2.33e-17;11!UBERON:0003101;3.18e-11;22!UBERON:0000079;3.18e-11;22!UBERON:0002323;5.94e-11;45!UBERON:0003133;3.49e-08;44!UBERON:0004458;4.63e-08;48!UBERON:0002553;6.20e-08;52!UBERON:0004913;3.51e-07;1!UBERON:0003703;3.51e-07;1!UBERON:0001174;3.51e-07;1!UBERON:0004914;3.51e-07;1!UBERON:0004645;5.73e-07;1!UBERON:0001256;5.73e-07;1!UBERON:0001259;5.73e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.11e-24,8;UBERON:0000991,2.51e-19,21;UBERON:0009196,2.51e-19,21;UBERON:0009117,2.51e-19,21;UBERON:0005564,2.51e-19,21;UBERON:0004176,2.22e-18,22;UBERON:0003135,3.16e-17,11;UBERON:0002323,1.37e-14,46;UBERON:0004458,1.50e-13,49;UBERON:0003886,4.46e-12,54;UBERON:0003101,3.90e-11,22;UBERON:0000079,3.90e-11,22;UBERON:0002553,2.01e-10,61;UBERON:0003133,2.12e-09,48;UBERON:0005156,6.68e-09,59;UBERON:0000990,6.68e-09,59;UBERON:0004913,3.52e-07,1;UBERON:0003703,3.52e-07,1;UBERON:0001174,3.52e-07,1;UBERON:0004914,3.52e-07,1;UBERON:0004645,5.26e-07,1;UBERON:0001256,5.26e-07,1;UBERON:0001259,5.26e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.411202997999018,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0.289803085735052,0.14828656316206,0,0,0,0,0.34362744548263,0,0,0,1.90090408889675,0,0,0,0.236777252044017,0.821127996921047,0,0.534880391567015,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,2.68507104770311,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1349799145941,0,0,0,0.163461903113459,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.365921118388786,0.132529768321485,0.929551542956147,0.10366105501537,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0.982827216677626,0,0,0.860919069801795,0,0,0,0,0.462942225792648,0,0,0,0,0,0,0,0,1.58040879591855,0,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,3.57656445851882,0,0,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20859449591622,0.40101294060657,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0.43050537267123,0,2.21715076768338,0.459446800413919,0,0,0,0,0,0,0,0,2.67060177818683,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.38524393686274,0,0,1.4098700508785,0,0,0,0.445773537109913,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0.306806047506464,0.123084805461069,0,0.179736702294654,0.537063524026827,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,1.80476528493745,1.76456280885966,1.34257269580674,0,1.11255605286265,0,0,0.706765357169704,0,0,0,0,0.296521128680622,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,1.13843818411917,0.832048038078832,0,0.293977192243133,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0.195551382734803,1.04206466326994,0.213452994739353,0,0.576361668616424,0,0,0,0,0,0,0,0.611989305817931,0,0,0.136905378891993,0,3.0083580899397,0,0,0,0,0,0,0,0,0.720599767084807,0,0.0787831823072236,0,0.0674035438541849,6.79149622451767,0.0846733320657845,0,0,0.803765742325096,0.412618309791701,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,10.0152875314194,0,0,0,0,0,0,4.10608410922391,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0.327872630709804,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310874401165561,0,0.477890301491107,0.449803112163605,1.08684069813382,0,0,0,0.150257608997218,0.380805212168795,0,0.363697318405119,0.859284456339908,0.464033759878494,1.59238355479446,0.400027764663154,0,0,0,0,0,0.521988583930423,13.1489436797118,0,0,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0.211312123358627,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,5.64077462619429,0,0,0,0,8.87136517302272,0.0675375846183947,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0.0887023701626388,0.115233987555779,3.60124819818579,0,0,0,0.111231401892069,0.078493092850514,0,0,0,2.80705868584208,1.9110067515482,0.0714765441766563,0,1.27865567904938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0.0644578879735772,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0.0679914901909147,0,0,0,0,0,0.252332849670158,0.109265571963696,0,2.34574308406558,1.87052183685892,1.01084389488329,1.0028301571695,7.04741893429626,5.62724673327975,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.26940821205835,0.143444410785353,0,3.90735689332678,0,0,12.9348291033485,0,0.244482888365733,0.813792356631477,0,0,0.320568492303233 | |||
|short_description=p5@FAM113B | |||
}} |
Revision as of 13:10, 11 January 2014
Short description: | p5@FAM113B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FAM113B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000551777_5end |
EntrezGene: | FAM113B |
HGNC: | 28255 |
UniProt: | F8VYL8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.08e-12 | 7 |
germ cell | 3.08e-12 | 7 |
bladder cell | 5.26e-07 | 1 |
lower urinary tract cell | 5.26e-07 | 1 |
follicular cell of ovary | 6.24e-07 | 1 |
granulosa cell | 6.24e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 7.11e-24 | 8 |
gonad | 2.51e-19 | 21 |
indifferent external genitalia | 2.51e-19 | 21 |
indifferent gonad | 2.51e-19 | 21 |
gonad primordium | 2.51e-19 | 21 |
external genitalia | 2.22e-18 | 22 |
male reproductive organ | 3.16e-17 | 11 |
body cavity | 1.37e-14 | 46 |
body cavity or lining | 1.50e-13 | 49 |
body cavity precursor | 4.46e-12 | 54 |
male organism | 3.90e-11 | 22 |
male reproductive system | 3.90e-11 | 22 |
anatomical cavity | 2.01e-10 | 61 |
reproductive organ | 2.12e-09 | 48 |
reproductive structure | 6.68e-09 | 59 |
reproductive system | 6.68e-09 | 59 |
hepatopancreatic ampulla | 3.52e-07 | 1 |
extrahepatic bile duct | 3.52e-07 | 1 |
common bile duct | 3.52e-07 | 1 |
duodenal papilla | 3.52e-07 | 1 |
urinary bladder urothelium | 5.26e-07 | 1 |
wall of urinary bladder | 5.26e-07 | 1 |
mucosa of urinary bladder | 5.26e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.07e-16 | 8 |
tubular adenocarcinoma | 9.68e-13 | 2 |
cancer | 3.97e-11 | 235 |
disease of cellular proliferation | 8.85e-11 | 239 |
carcinoma | 2.18e-08 | 106 |
myeloid leukemia | 1.04e-07 | 31 |
pleomorphic carcinoma | 5.57e-07 | 1 |