FFCP PHASE1:Hg19::chr12:12966304..12966315,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51202 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18682 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=12bp_to_ENST00000542123_5end | |||
|description=CAGE_peak_3_at_DDX47_5end | |||
|id=chr12:12966304..12966315,+ | |||
|ontology_enrichment_celltype=CL:0000012!3.91e-23!682;CL:0000548!3.77e-22!679;CL:0000004!3.77e-22!679;CL:0000255!3.77e-22!679;CL:0000003!7.48e-16!722;CL:0000063!4.01e-11!578;CL:0000144!8.03e-11!625;CL:0000066!9.69e-11!254;CL:0000077!2.18e-09!19;CL:0000076!1.98e-08!62;CL:0002321!3.90e-08!248;CL:0000220!5.98e-08!246 | |||
|ontology_enrichment_celltype_v019=CL:0000077;3.87e-10;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.82e-13,253;CL:0000077,1.60e-10,19;CL:0000076,1.83e-08,63;CL:0002321,5.11e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.55e-17!106;DOID:0050687!1.95e-15!143;DOID:14566!1.66e-13!239;DOID:162!9.83e-13!235;DOID:1749!7.38e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.75e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.59e-16,106;DOID:0050687,8.99e-14,143;DOID:14566,8.76e-11,239;DOID:162,2.73e-10,235;DOID:1749,2.76e-09,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.57e-07;9!UBERON:0001557;1.57e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.59e-07,9 | |||
|phase1_expression=1.81678379270557,0.214100523890983,2.11431606143957,2.00146596706261,0.893922188854576,2.61701557230111,0,0.631719873426831,0.261185628199839,1.72013755551056,3.48900583986214,1.31064823278103,0,0.247532705920093,0.331397375727916,3.36162573225888,2.41077811209591,5.11217063271161,0.975865597581014,0.738726348460727,0.408001382488506,0.313454721478088,1.14494394852423,1.36874425072884,0.753255837568817,1.22261449196722,1.06730766284929,0.865818594450472,0.786728553697808,0.383829398097213,0.928896739896456,0,0.6024118375565,0,0.232401601740905,0.426507697462265,0.587200878669695,0,0.401088894940283,1.08505435357926,0.223915474239924,0,0.515151135268373,0.436194716338694,1.13362783106643,0.485168122375632,0.464858073811369,0.822335776043652,1.54853185447552,0.575384784644301,0.256160706529101,0.945928919554341,0.689491361473237,2.5819387343353,2.70852973188684,0.752969358170419,0.545812300115692,2.02251136000576,1.53041946185451,0,1.27867425159808,0.989553900560148,0.398927315243264,0.426224750532694,0.290209238628584,0.56738522469114,2.4912889959823,1.00499466102697,1.0429658368404,0.65156653411535,1.21079900526674,1.47311054395026,1.26584954976354,0.845021145247767,1.27562579979026,1.25795187305026,0.44931452458598,0.600707571366025,0.32145117339416,0.285012743741249,0.79566670879636,0.91332076882317,1.75996244461323,0,0,0.426730222566507,0.400395987036012,0,0,1.90810750907073,3.41527781465669,4.11066032559657,2.29363936875137,2.64342657158052,2.24203425192614,0.790152254325231,3.14735632182133,2.35806457649499,0.616804496998528,0.501559486172034,0.651844533267181,0.473447805734733,1.94826728407911,1.11410456885174,0.883817722424512,0.664601683750863,0.541607727530031,0.128091319725675,0.390178042679635,0.164437904603676,0,0.579606171470105,0.741432815810302,0,0,0.339928028092699,0.766440987203842,1.03088233644789,1.77113784413652,0.318565414324097,0.651083453856419,0,0.301150238155546,0.127986611154418,0,0.473554504088034,0,3.42731463482045,2.13952156626806,1.88271725047639,0,0.670700859703636,1.53435074212236,1.44575660953827,2.50668955317945,0.724232594804119,0.795285947051099,0,2.07976597760949,4.21285855178871,1.84453049955565,0.392937226493138,0,0,0,0.348259474598534,0.26591592103773,0.238490624305342,0.571994910780128,0.371457501329565,0.79504962946682,0.860234595106124,1.04142150482278,2.82653970962005,2.09749718104953,0.825354125820202,1.8809546988313,0,1.06729878806013,0,0.805658634218294,0.760272105718513,0.24406205754817,0.367663080345869,0,1.3394959242612,0.673588117878509,0.788280363383256,1.53316637465883,0,1.64881569537367,0,0,0.436094052142534,1.49091585508596,2.5326102332916,5.69359477496841,2.58152958673932,0.354668382198357,3.92474320099615,2.1349799145941,3.45334567784024,1.55605517699883,0.942974704487816,1.30769522490767,0.605429710579726,0.576175924479999,0.468642863667593,1.24864030732128,2.2818872861778,0.747243402759005,0.469737994575059,1.13311061057692,1.12360645361799,0.816616685019573,1.10550885580591,0.619954687054593,1.18800285728205,0,0,0,0.505008341862199,0.875829639103749,0.277064115484183,1.31693286264251,0.919463387397059,0.45071417671979,2.04177929688038,5.38168907066586,2.34913127700424,2.7551147150743,4.50136644126603,5.77094163735258,3.09168648054755,2.79175284497385,1.0126579934476,1.94874010322397,3.5340728394176,3.95814564161887,0.969876340912871,2.4850671476163,3.42557133973977,3.05209066158878,2.12586938479627,1.90922284413584,1.43402297694502,1.82960559194393,1.06023814657188,1.74290914304278,0.829288440122964,1.26160425437814,1.45990943630332,4.69348596989448,0.643240938192885,2.76269842704961,1.85747171212792,0,5.56041960187266,3.87744787179634,6.98931986662098,4.08087699109858,3.7039505495709,4.50814176311084,3.23595139584395,4.51309369788296,4.61696588335668,0.738155454624648,0,0.4115740113314,0,0,0,0,0.882926198829301,3.19769940212095,1.54411029268673,1.64625428112938,0,1.20634766893957,0.555530670951178,0.325808305310325,0,5.77325368101093,1.39116485970092,1.40890433082986,0.721832238805369,0.462985512576611,1.33177906564219,0.790204397959275,0,0.246217006087397,0.702012795417713,0.297262324577456,2.81201501960331,2.18376766658517,2.41017665312057,2.14940454486836,0.581267877027924,3.4504441124869,1.47798971368783,0.176096868026452,0.414656231081544,0.576479813667846,0.37872730027914,0.253991577168676,0,0,1.71072446022705,0.514137463516618,0.300343057843917,0,0.224262168690721,1.30788020649984,1.1734125731352,3.87815147273333,0,0.845302752556,3.19125739901845,6.24044621468197,0,0,0.266422179016099,0.57191197463259,0.542621605391443,0.823240336780769,0.65147236858747,3.19852753868291,1.58390374586686,2.71295439353627,4.35766729300147,3.19913571782583,1.2162378064119,0,0,3.11512312139057,0,0,1.73737568001095,0.205476322550383,1.43248770591916,0.336255431980582,3.15249216323084,2.37190332345469,2.18183161675572,1.77866236955724,1.30139853857622,2.31986643833309,0.670065061337395,0.637938751653163,0.749007023947182,0,0.414415513436035,0.3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| |||
|short_description=p3@DDX47 | |||
}} |
Revision as of 12:19, 11 January 2014
Short description: | p3@DDX47 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DDX47_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_ENST00000542123_5end |
EntrezGene: | DDX47 |
HGNC: | 18682 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.82e-13 | 253 |
mesothelial cell | 1.60e-10 | 19 |
squamous epithelial cell | 1.83e-08 | 63 |
embryonic cell | 5.11e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.59e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.59e-16 | 106 |
cell type cancer | 8.99e-14 | 143 |
disease of cellular proliferation | 8.76e-11 | 239 |
cancer | 2.73e-10 | 235 |
squamous cell carcinoma | 2.76e-09 | 14 |