FFCP PHASE1:Hg19::chr12:8044970..8044999,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=404635 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_3_at_NANOGP1_5end | |||
|id=chr12:8044970..8044999,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.86e-42!5;CL:0000039!2.84e-31!7;CL:0000586!2.84e-31!7;CL:0000540!1.86e-20!6;CL:0000031!1.86e-20!6;CL:0000404!1.86e-20!6;CL:0000047!1.64e-15!8 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.79e-75;7!CL:0000586;1.79e-75;7!CL:0002322;7.25e-08;5!CL:0000540;9.23e-07;6!CL:0000404;9.23e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.79e-75,7;CL:0000586,1.79e-75,7;CL:0002322,7.49e-08,5;CL:0000540,8.97e-07,6;CL:0000031,8.97e-07,6;CL:0000404,8.97e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.03e-53;10!UBERON:0005564;4.03e-53;10!CL:0000031;9.23e-07;6 | |||
|ontology_enrichment_disease=DOID:3095!1.14e-21!22;DOID:2994!1.14e-21!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.34e-24;22!DOID:2994;1.34e-24;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.34e-24,22;DOID:2994,1.34e-24,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.03e-27!8;UBERON:0003135!4.79e-20!11;UBERON:0000991!4.64e-16!21;UBERON:0009196!4.64e-16!21;UBERON:0009117!4.64e-16!21;UBERON:0005564!4.64e-16!21;UBERON:0004176!2.49e-15!22;UBERON:0003101!3.64e-10!22;UBERON:0000079!3.64e-10!22;UBERON:0002323!2.66e-07!46;UBERON:0003133!5.43e-07!48;UBERON:0004458!7.58e-07!49 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.66e-66;8!UBERON:0003135;2.24e-48;11!UBERON:0000991;9.82e-26;21!UBERON:0003101;1.34e-24;22!UBERON:0000079;1.34e-24;22!UBERON:0000922;4.21e-12;49!UBERON:0002323;1.42e-11;45!UBERON:0003133;1.51e-09;44!UBERON:0002553;1.26e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.66e-66,8;UBERON:0003135,2.24e-48,11;UBERON:0000991,9.82e-26,21;UBERON:0009196,9.82e-26,21;UBERON:0009117,9.82e-26,21;UBERON:0005564,9.82e-26,21;UBERON:0004176,1.34e-24,22;UBERON:0003101,1.34e-24,22;UBERON:0000079,1.34e-24,22;UBERON:0002323,4.14e-12,46;UBERON:0003133,1.25e-11,48;UBERON:0004458,2.10e-11,49;UBERON:0003886,2.12e-10,54;UBERON:0005156,1.45e-09,59;UBERON:0000990,1.45e-09,59;UBERON:0002553,2.88e-09,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0.265059536642971,0.116193942869518,0,1.00928340350251,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0.321506296930038,0.550157746388935,1.24632101408756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0.327796715891087,0,3.05966489225945,7.74930475270125,36.2065904167289,27.3271217828689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@NANOGP1 | |||
}} |
Revision as of 11:55, 11 January 2014
Short description: | p3@NANOGP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NANOGP1_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | NA |
EntrezGene: | NANOGP1 |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.79e-75 | 7 |
germ cell | 1.79e-75 | 7 |
embryonic stem cell | 7.49e-08 | 5 |
neuron | 8.97e-07 | 6 |
neuroblast | 8.97e-07 | 6 |
electrically signaling cell | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 3.66e-66 | 8 |
male reproductive organ | 2.24e-48 | 11 |
gonad | 9.82e-26 | 21 |
indifferent external genitalia | 9.82e-26 | 21 |
indifferent gonad | 9.82e-26 | 21 |
gonad primordium | 9.82e-26 | 21 |
external genitalia | 1.34e-24 | 22 |
male organism | 1.34e-24 | 22 |
male reproductive system | 1.34e-24 | 22 |
body cavity | 4.14e-12 | 46 |
reproductive organ | 1.25e-11 | 48 |
body cavity or lining | 2.10e-11 | 49 |
body cavity precursor | 2.12e-10 | 54 |
reproductive structure | 1.45e-09 | 59 |
reproductive system | 1.45e-09 | 59 |
anatomical cavity | 2.88e-09 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.34e-24 | 22 |
germ cell cancer | 1.34e-24 | 22 |