FFCP PHASE1:Hg19::chr12:6937377..6937394,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10536 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19318 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-169bp_to_ENST00000251761_5end | |||
|coexpression_cluster_id=C3323 | |||
|description=CAGE_peak_2_at_LEPREL2_5end | |||
|id=chr12:6937377..6937394,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.36e-47!180;CL:0000057!4.69e-23!75;CL:0000183!4.28e-18!59;CL:0000680!3.73e-16!57;CL:0000056!3.73e-16!57;CL:0000355!3.73e-16!57;CL:0000187!5.08e-16!54;CL:0000393!4.28e-14!60;CL:0000211!4.28e-14!60;CL:0000192!4.23e-12!42;CL:0000514!4.23e-12!42;CL:0002321!1.08e-10!248;CL:0000220!1.35e-10!246;CL:0002620!3.31e-10!23;CL:0000222!4.41e-10!119;CL:0000359!2.25e-08!32;CL:0000499!5.99e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002620;9.00e-11;23!CL:0000187;1.40e-10;55!CL:0000057;5.72e-10;73!CL:0000192;1.42e-09;43!CL:0000134;1.82e-09;55!CL:0000723;3.88e-09;61!CL:0000048;8.53e-09;58!CL:0002320;9.25e-09;188!CL:0000393;1.48e-08;61!CL:0000211;1.48e-08;61!CL:0000359;2.25e-08;32!CL:0000327;3.03e-07;15!CL:0000034;5.74e-07;69!CL:0000499;6.30e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.69e-25,76;CL:0000680,9.79e-18,58;CL:0000056,9.79e-18,58;CL:0000355,9.79e-18,58;CL:0000187,1.36e-17,55;CL:0000393,4.55e-15,61;CL:0000211,4.55e-15,61;CL:0000192,2.32e-13,43;CL:0000514,2.32e-13,43;CL:0002620,7.32e-11,23;CL:0000222,3.03e-10,121;CL:0000359,6.84e-09,32;CL:0002321,2.29e-08,250;CL:0000327,4.19e-07,15;CL:0000499,8.05e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000355;6.99e-10;58!CL:0000514;1.42e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.68e-18!83;UBERON:0002329!6.68e-18!83;UBERON:0003077!6.68e-18!83;UBERON:0003059!6.68e-18!83;UBERON:0007282!6.68e-18!83;UBERON:0009618!6.68e-18!83;UBERON:0007285!6.68e-18!83;UBERON:0004290!8.62e-17!70;UBERON:0000486!1.06e-16!82;UBERON:0001134!3.78e-16!61;UBERON:0002036!3.78e-16!61;UBERON:0003082!3.78e-16!61;UBERON:0005256!6.03e-16!143;UBERON:0002385!1.14e-15!63;UBERON:0001015!1.14e-15!63;UBERON:0000383!1.14e-15!63;UBERON:0000475!4.22e-15!365;UBERON:0000119!4.91e-13!312;UBERON:0000483!2.67e-12!309;UBERON:0002100!9.39e-12!216;UBERON:0003914!5.17e-11!118;UBERON:0004872!5.75e-11!84;UBERON:0000481!1.01e-10!347;UBERON:0000490!1.02e-10!138;UBERON:0002049!2.97e-10!79;UBERON:0007798!2.97e-10!79;UBERON:0000468!1.65e-09!659;UBERON:0003104!5.68e-09!238;UBERON:0009142!5.68e-09!238;UBERON:0001981!1.55e-08!60;UBERON:0007500!1.55e-08!60;UBERON:0004537!1.55e-08!60;UBERON:0006965!1.55e-08!60;UBERON:0001637!3.04e-08!42;UBERON:0003509!3.04e-08!42;UBERON:0004572!3.04e-08!42;UBERON:0003102!3.97e-08!95;UBERON:0000055!6.94e-08!69;UBERON:0002199!8.91e-08!45;UBERON:0002416!8.91e-08!45;UBERON:0004573!1.98e-07!33;UBERON:0004571!1.98e-07!33;UBERON:0004535!3.42e-07!110;UBERON:0002097!4.23e-07!40;UBERON:0000467!4.69e-07!625;UBERON:0000480!5.79e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;1.84e-07;198!UBERON:0004573;4.72e-07;33!UBERON:0004571;4.72e-07;33!UBERON:0002204;7.96e-07;70!UBERON:0002385;8.22e-07;31!UBERON:0001015;8.22e-07;31!UBERON:0000383;8.22e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.81e-19,78;UBERON:0002329,6.37e-18,71;UBERON:0003059,6.37e-18,71;UBERON:0007282,6.37e-18,71;UBERON:0004290,6.37e-18,71;UBERON:0009618,6.37e-18,71;UBERON:0007524,8.83e-18,73;UBERON:0000486,1.18e-17,83;UBERON:0003077,2.88e-17,72;UBERON:0007285,2.88e-17,72;UBERON:0001134,4.50e-17,62;UBERON:0002036,4.50e-17,62;UBERON:0003082,4.50e-17,62;UBERON:0002385,2.20e-16,64;UBERON:0001015,2.20e-16,64;UBERON:0000383,2.20e-16,64;UBERON:0003104,1.12e-15,160;UBERON:0009142,1.12e-15,160;UBERON:0005256,1.03e-13,122;UBERON:0000490,4.97e-11,148;UBERON:0003914,3.90e-10,117;UBERON:0002100,5.39e-10,199;UBERON:0004872,9.83e-10,83;UBERON:0000119,1.74e-09,309;UBERON:0002049,2.63e-09,78;UBERON:0007798,2.63e-09,78;UBERON:0000483,7.69e-09,306;UBERON:0001637,2.36e-08,42;UBERON:0003509,2.36e-08,42;UBERON:0004572,2.36e-08,42;UBERON:0002199,9.29e-08,46;UBERON:0002416,9.29e-08,46;UBERON:0004573,1.16e-07,33;UBERON:0004571,1.16e-07,33;UBERON:0007500,1.70e-07,59;UBERON:0001981,1.70e-07,59;UBERON:0004537,1.70e-07,59;UBERON:0006965,1.70e-07,59;UBERON:0004535,2.49e-07,109;UBERON:0002097,3.17e-07,41;UBERON:0000055,8.06e-07,68 | |||
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| |||
|short_description=p2@LEPREL2 | |||
}} |
Revision as of 11:46, 11 January 2014
Short description: | p2@LEPREL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LEPREL2_5end |
Coexpression cluster: | C3323_Smooth_Fibroblast_leiomyoma_teratocarcinoma_pagetoid_Chondrocyte_mesenchymal |
Association with transcript: | -169bp_to_ENST00000251761_5end |
EntrezGene: | LEPREL2 |
HGNC: | 19318 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.69e-25 | 76 |
muscle precursor cell | 9.79e-18 | 58 |
myoblast | 9.79e-18 | 58 |
multi-potent skeletal muscle stem cell | 9.79e-18 | 58 |
muscle cell | 1.36e-17 | 55 |
electrically responsive cell | 4.55e-15 | 61 |
electrically active cell | 4.55e-15 | 61 |
smooth muscle cell | 2.32e-13 | 43 |
smooth muscle myoblast | 2.32e-13 | 43 |
skin fibroblast | 7.32e-11 | 23 |
mesodermal cell | 3.03e-10 | 121 |
vascular associated smooth muscle cell | 6.84e-09 | 32 |
embryonic cell | 2.29e-08 | 250 |
extracellular matrix secreting cell | 4.19e-07 | 15 |
stromal cell | 8.05e-07 | 28 |